Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g3124 ATGCAAGTCCCCAAATCCCCTTCCAAAGATAAACGATTCGCTAACCATAAATGGCTCCTAAAATTCGGTTTACTCATTTTGGTTATGCTGCTTTTGTTATTGCCTTTTTATCTCGAGTCAGATAACGCTAATACTCGTAATCCACTCATTGCGTCGTCGTATTACACTGTGGTTATAGATTGTGGAAGCACTGGCACACGGGTGAATGTGTACGAGTGGAAAGTAGGGGTAGAGGGTGTAGGTAAAGGGAACTTGCCAATTTTACTGCATTCTTATCCTGATAACACAACCAAGACTTCCCTTTGGAAAACTTCTTGTCAATATCACTGTATGCAAACCGATCCCGGGTTAGACAACTTTGTTAATGATTCTTTAGGAGTTAGAGAGGCTTTGGAGCCTTTGGTTGTGTGGGCAGAACATCTTGTGCCGCGTGAAATGCACGGTGACACTCCTGTTTTTGTTCTGGCTACTGCTGGCCTGAGGAGGCTCCCCCGGGACGATGCCGATCGAGTCCTGGGAGATGTTGAGGCTGTTGTGAAAGATCACTCCTTTATGTTTAGCAAGAGCTGGATAAGGGTTTTGAGTGGGAGGGAGGAAGCTTATTATGGTTGGGTGGCTTTGAATTACAAAATGGGCAGCTTTGATAACTATTCTGTGTCTCCCACTTTGGGAATTATTGATTTGGGTGGCTCTTCGCTGCAAATTGTGGCAGAGATCGATGATGGTGCCGCCAGGAATGATGTGCACGTGATGAGATCGAAGCTCAACTCAATAGAGTCTCGGATTGTGGCATACTCGTTGCCGGCATTTGGCTTAAATGAAGCATTTGATAGGACAGTTCTTATGCTCAGAAACAATCAAAGCGTGGAAAGAACCAGAAGTGTCTTTGAGGTTAGACATCCTTGTCTGGTGTCAACTTTTGTACAAAACTATACATGCCATTCTTGCTCTATATTTGATTCCACTTATCAGAAAAATCATAGTCAACCCCAAAGTAGTGAACCTTATTCTTTACATCTTATTGGAGAACCTGATTGGGAGCAATGCAAAGAACTAGCTATTGCTGCTGCTATGAACTTGAGCAATTCCGAAGTGTCACATCCAACAGTTAGCAAAAATTGCCAAGGCACTGGTATACTTAATTTAACAGCTGTTGCACAGCCAATCAAGCGCTTTCATGCTTTATCTGGTTTCTATTTTGTCCACAATAAGCTAAATTTAAGTCCAAGGGCGAACTTAACAATAGTTTGGGAGTCAGGCAGGCAAATATGTTCAAGTTTATGGTCTGGGTGGAGCAGTTTTTCTGACAATCCAAATTATGCCGGACAATTTTGTTTCCGAGTGGCTTACATGGCATCATTGATTGAATATGGTCTGTGTCTTGGCAATGTAGAAATGGTATTTGGTCCAGGTGACGTTTCATGGACATTAGGAGCTGCATTGATTGAAGGGAAATTTCTATGGTTAAATAGTACAACTACAAGCCGCAAAGCCCAGACTATTATTTTAACTTTGAAGAATGTCAAGGATAGAGTTGAAAGAAGCAGTTGCAGAATGGCGCTGGTACGTTCTCTCTATCCTACCATCGCTCTTCCTCTTTCAACCCTTTCCGTTACGACCAATTTCTCTGTTCGATGCTCCAATCTTCACCCGCAACCGCAAATGGACTCACGCAAGTTAGTCCTTGCAGTGAAGGACAAGCTTGAAAAAGATCACCATAGCCTCCCTGTTGGTAGAAATGGAAGGGATGACGAAGATATGATACTGTGGTTTCTCAAAGATCGCAAGTTCTCTGTTGAAGAAGCTGTTTCCAAGCTGACTAAAGCCATCAAATGGCGTCAAGATTTTGAGGTGTCTAAATTGACTGAAGAAGTCGTTAACGAGGTTGCTCAAACTGGAAAAGCTTATGTACATGACTTCCTAGACATCAATGACAGACCTGTGCTTGTGGTGGTCGCATCAAAGCATTTTCCTGAAGCACACGACCCTGCAGCCGATGAGAGGCTGTGTGTTTTCCTAATTGAGAAGGCATTAAGTAAGCTTCCAACTGGGAAAGAACAGATACTTGGAATAGTTGATCTCAAAGGTTTTGGTACAGAAAATGCTGATCTTAAATTCTTGACATTCTTGTTTGATGTATTCTATTATTACTATCCAAAGCGATTGGGTCAAGTATTATTTGTGGATGCACCTTTTGTGTTTAAGCCAATTTGGCAGCTAGTCAAACCCTTGTTAAAATCATATGCTTCTCTGGTGAGATTTTGCTCTGCGGAGGATGTTAGGAAGGAATATTTTACAGACAAAACTTTGCCTCCAAGATTCAGAGATTGA 2331 0.4221 MQVPKSPSKDKRFANHKWLLKFGLLILVMLLLLLPFYLESDNANTRNPLIASSYYTVVIDCGSTGTRVNVYEWKVGVEGVGKGNLPILLHSYPDNTTKTSLWKTSCQYHCMQTDPGLDNFVNDSLGVREALEPLVVWAEHLVPREMHGDTPVFVLATAGLRRLPRDDADRVLGDVEAVVKDHSFMFSKSWIRVLSGREEAYYGWVALNYKMGSFDNYSVSPTLGIIDLGGSSLQIVAEIDDGAARNDVHVMRSKLNSIESRIVAYSLPAFGLNEAFDRTVLMLRNNQSVERTRSVFEVRHPCLVSTFVQNYTCHSCSIFDSTYQKNHSQPQSSEPYSLHLIGEPDWEQCKELAIAAAMNLSNSEVSHPTVSKNCQGTGILNLTAVAQPIKRFHALSGFYFVHNKLNLSPRANLTIVWESGRQICSSLWSGWSSFSDNPNYAGQFCFRVAYMASLIEYGLCLGNVEMVFGPGDVSWTLGAALIEGKFLWLNSTTTSRKAQTIILTLKNVKDRVERSSCRMALVRSLYPTIALPLSTLSVTTNFSVRCSNLHPQPQMDSRKLVLAVKDKLEKDHHSLPVGRNGRDDEDMILWFLKDRKFSVEEAVSKLTKAIKWRQDFEVSKLTEEVVNEVAQTGKAYVHDFLDINDRPVLVVVASKHFPEAHDPAADERLCVFLIEKALSKLPTGKEQILGIVDLKGFGTENADLKFLTFLFDVFYYYYPKRLGQVLFVDAPFVFKPIWQLVKPLLKSYASLVRFCSAEDVRKEYFTDKTLPPRFRD* 777
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g3124 776 Gene3D Exopolyphosphatase. Domain 2 196 467 - -
Apr9g3124 776 SUPERFAMILY CRAL/TRIO N-terminal domain 559 624 IPR036273 -
Apr9g3124 776 Gene3D - 42 195 - -
Apr9g3124 776 SMART sec14_4 629 771 IPR001251 -
Apr9g3124 776 Pfam GDA1/CD39 (nucleoside phosphatase) family 53 484 IPR000407 GO:0016787
Apr9g3124 776 PANTHER GDA1/CD39 NUCLEOSIDE PHOSPHATASE FAMILY PROTEIN 4 514 - -
Apr9g3124 776 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 625 776 IPR001251 -
Apr9g3124 776 Pfam CRAL/TRIO domain 631 767 IPR001251 -
Apr9g3124 776 SUPERFAMILY CRAL/TRIO domain 624 764 IPR036865 -
Apr9g3124 776 PANTHER ADENOSINE/GUANOSINE DIPHOSPHATASE 4 514 IPR000407 GO:0016787
Apr9g3124 776 CDD SEC14 627 747 IPR001251 -
Apr9g3124 776 Gene3D - 536 774 IPR036865 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g3124 Apr-Chr9 38045769 38053710 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g3124 25 487 Nodulin-like Gene Family AT4G19180 35.456 4.38e-83 278
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g3124 - - vun:114175521 1095.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g3124 9 38045769 38053710 Apr9g3124 9 38045769 38053710 ECH
Apr9g3124 9 38045769 38053710 Apr7g0579 7 12285271 12290586 PCT