Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g3111 ATGCTTCATATCAATTGTCCTGTAATTAATGCATTTGCACTTCCTCCTATTAAGGAACGCAAATGGAGATGGCTTGAAACGCAGATGTTTCCCTTGGGTTCTGTTACTCCTTCTCTCATGGACATAGAAACAAACCTCAATGAAAACTATGCCTCACAACCTATGCATTTGCAAGAAAACTACTTGAGATCCAGAATGAAAGATGACATTCCCTTTGGAGACCCTTCTTCACAGTGTTTTCTGCAAGACTTTCCTCGCATTGATCAGTTTAATGTGAATGACTACTCATCCAATCCAGTTTTTGGCATCCAAACTTCAAATTTTGATCCTTTTGATCATAATGTAACATGCGAATCTGCACCTGCTGATTTTGAAGTTTATGAGTGCAAGCCTTTTCCTGAGAGTAATTGTAATGGGCATGCTCATCTTACGGACAATTTCCAATATGAAGGTTATAGTTTGAACCTCCCTCGGAGGAATCAGCTTGATATGATGGTTGGAAACCAAAGTTATGTGCCCTTTAATCCTCTAGAAACCAAGCCTTTGAATATTGTTGTACCCGATGAAGTCTCATACATATCTCCACCAAATTATTATAAGAGAGTTGGCTTGAATAAAACCAATAGGGAAACTCCAACCACTAGAAGAACATTCAAAGTTCGGAAGAAGTCCAACATAGTGAAGGGACAATGGACAGCAGATGAAGATAGATTGTTGATTCAACTGGTGGAACAATATGGAGTGAGGAAGTGGTCTCATATTGCTCAGACATTGCCTGGAAGAATAGGGAAACAATGCAGAGAAAGATGGCATAACCATTTAAGGCCTGACATTAAGAAGGACATATGGACAGAAGAAGAGGATAAGATACTTATCCAAGCTCATGCAGAGATAGGAAATAAGTGGGCTGAGATTGCAAAAAGATTGCCAGGAAGAACTGAGAACTCAATCAAAAACCATTGGAATGCAACCAAGAGAAGGCAATATTCCAAAAGAAAATGTCGTTCAAAGTATCCTAGAGGCTCTCTTCTTCAGGAATATATCAAGAGCTTGAACTTGGACCAAAATCCACCGATAGACTACAGAAAAAAATCTGTTGTTAAGGCAAATGCTAATGCCAAGACAAACAATACTAGCACAAGGAAAGCAACATCTCAGCCTCACACTGCAGATCAATTTTGTCCCAATAACCGATTGGTGCCAAATTATGAATTTAATGAGGTCCCAGATATTTGTTTGGATGATAATTTGTTTGAAGAGGGGTGTAGTATTGATTCTCTTCTAGATGATATGCAAAGTGCTTCTACTGTGGATGAGAAAGATTTTGATGGAAAAATGCTATTTAACGTTGATGACCATCATGAGACAGATATGCCACAGGAGATGATGGCACCTAATGTGGGGATTGAAGTTAAGAAGGAACTGGATTTGGTAGAGATGATGACCTAG 1449 0.3899 MLHINCPVINAFALPPIKERKWRWLETQMFPLGSVTPSLMDIETNLNENYASQPMHLQENYLRSRMKDDIPFGDPSSQCFLQDFPRIDQFNVNDYSSNPVFGIQTSNFDPFDHNVTCESAPADFEVYECKPFPESNCNGHAHLTDNFQYEGYSLNLPRRNQLDMMVGNQSYVPFNPLETKPLNIVVPDEVSYISPPNYYKRVGLNKTNRETPTTRRTFKVRKKSNIVKGQWTADEDRLLIQLVEQYGVRKWSHIAQTLPGRIGKQCRERWHNHLRPDIKKDIWTEEEDKILIQAHAEIGNKWAEIAKRLPGRTENSIKNHWNATKRRQYSKRKCRSKYPRGSLLQEYIKSLNLDQNPPIDYRKKSVVKANANAKTNNTSTRKATSQPHTADQFCPNNRLVPNYEFNEVPDICLDDNLFEEGCSIDSLLDDMQSASTVDEKDFDGKMLFNVDDHHETDMPQEMMAPNVGIEVKKELDLVEMMT* 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g3111 482 Gene3D - 282 343 - -
Apr9g3111 482 PANTHER BNAC07G50190D PROTEIN 139 354 - -
Apr9g3111 482 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 223 278 IPR017930 -
Apr9g3111 482 CDD SANT 231 274 IPR001005 -
Apr9g3111 482 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 279 329 IPR017930 -
Apr9g3111 482 PANTHER MYB PROTEIN-RELATED 139 354 - -
Apr9g3111 482 ProSiteProfiles Myb-like domain profile. 275 325 IPR001005 -
Apr9g3111 482 Pfam Myb-like DNA-binding domain 228 274 IPR001005 -
Apr9g3111 482 Pfam Myb-like DNA-binding domain 283 322 IPR001005 -
Apr9g3111 482 Gene3D - 227 280 - -
Apr9g3111 482 SUPERFAMILY Homeodomain-like 225 321 IPR009057 -
Apr9g3111 482 CDD SANT 283 325 IPR001005 -
Apr9g3111 482 SMART sant 227 276 IPR001005 -
Apr9g3111 482 SMART sant 279 327 IPR001005 -
Apr9g3111 482 ProSiteProfiles Myb-like domain profile. 223 274 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g3111 Apr-Chr9 37926958 37928841 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g3111 99 431 MYB Transcription Factor Family AT4G18770 48.066 2.90e-95 293
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Apr9g3111 Myb_DNA-binding 6.8e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g3111 K09422 - gmx:100816653 717.613
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g3111 9 37926958 37928841 Apr9g3111 9 37926958 37928841 ECH