Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g3098 ATGTCAAAGTTTGCTGCACCGATTCCGGGTAGGACAGACAACCAAGTGAAGAACTATTGGAACACTCATTTAAGCAAGAAGCTTGGTGTTAAGAAGAAAAAGAGCAAAGTTCGTGCCCTTCATCCGAAAATTGTCTATATTATTGATCCAAAGGATAATTGCAATGACACATGTACGAGGCATTCAGGGTCAATTGGTGAAGGCGAAAATCTTGTCCAAGCAAACGTGAGTGAGGGTCTGATAAACTTTCAAAGCATGCATGAAGAGATTATGGCAGATGATTTTGAAAGTACATTTTGTTTGCTGATAGTGAGCTTAAGCTATGCACTACTCGTTACTTGA 342 0.3977 MSKFAAPIPGRTDNQVKNYWNTHLSKKLGVKKKKSKVRALHPKIVYIIDPKDNCNDTCTRHSGSIGEGENLVQANVSEGLINFQSMHEEIMADDFESTFCLLIVSLSYALLVT* 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g3098 113 CDD SANT 8 23 IPR001005 -
Apr9g3098 113 Gene3D - 2 44 - -
Apr9g3098 113 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 4 47 - -
Apr9g3098 113 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 28 IPR017930 -
Apr9g3098 113 SUPERFAMILY Homeodomain-like 3 28 IPR009057 -
Apr9g3098 113 PANTHER TRANSCRIPTION FACTOR WER-LIKE 4 47 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g3098 Apr-Chr9 37803016 37803643 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g3098 2 49 MYB Transcription Factor Family AT5G14750 62.500 2.05e-13 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g3098 K09422 - aprc:113874834 222.246