Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g3096 ATGATTTCCGTAAGCATGAAGAAGAACTTATATTGGTTTAAAGAGATTTCTAACAACGTGAGATCAGGTAGAAGGCTTTCACTTGGGGAATACAAGCGAGCAGTGTCATGGTCAAAGTATCTGATCTCATCCGGGGCAGCCATAAAGGGAGAAGGAGAGGAAGAATGGAGTGCTGATATGTCTCAGTTGTTCATTGGGTCAAAGTTCGCTTCTGGCAGGCATAGCAGAATCTACAGAGGGATCTACAAGCACATGGATGTTGCAATTAAGTTGGTAAGTCAACCTGAAGAGGATGAGGACTTAGCTGTTTTGCTTGAGAAGCAGTTTACTTCAGAGGTTGCTTTGCTTTTTCGATTGCGCCATCCAAATATCATTACTTTTGTTGCAGCTTGCAAGAAACCTCCCGTTTTCTGTATAATTACAGAATATTTGGCTGGGGGGTCCTTGAGAAAATACTTGCATCAGCAAGGACCACATTCAGTTCCTCACATACTTGTTCTAAAATTAGCCCTTGACATTGCACGAGGAATGCAATATCTTCATTCACAAGGTATACTTCACAGGGATCTCAAATCAGAAAACCTGCTGTTGGGGGAAGATATGTGTGTAAAAGTAGCAGATTTTGGGATCTCATGCTTGGAATCCCAGACTGGTAGTGCCAAAGGATTCACCGGAACATACCGCTGGATGGCACCTGAAATGATCAAGGAAAAGCGTCATACCAAGAAAGTAGATGTCTATAGTTTTGGCATAGTTTTATGGGAAGTGCTAACAGGATTGACACCATTTGACAACATGACACCTGAACAGGCAGCTTATGCAGTCACCCACAAGAATGCAAGGCCTCCTTTACCATCTGACTGTCCAAAAGCATTTAGTCATCTCATAAACAGATGCTGGTCGAGCAATGCAGATAAACGGCCACATTTTGATGAGATAGTCTCAATTTTGGAGAGCTATACTGAAGCAATTGAGCAGGATCCTGAATTTTTCTCCACTTACAAACCACGTTCAAATAATAGAATTCTCAGATGCTTACCACAATGTAATGCTGCTAATTAA 1062 0.4181 MISVSMKKNLYWFKEISNNVRSGRRLSLGEYKRAVSWSKYLISSGAAIKGEGEEEWSADMSQLFIGSKFASGRHSRIYRGIYKHMDVAIKLVSQPEEDEDLAVLLEKQFTSEVALLFRLRHPNIITFVAACKKPPVFCIITEYLAGGSLRKYLHQQGPHSVPHILVLKLALDIARGMQYLHSQGILHRDLKSENLLLGEDMCVKVADFGISCLESQTGSAKGFTGTYRWMAPEMIKEKRHTKKVDVYSFGIVLWEVLTGLTPFDNMTPEQAAYAVTHKNARPPLPSDCPKAFSHLINRCWSSNADKRPHFDEIVSILESYTEAIEQDPEFFSTYKPRSNNRILRCLPQCNAAN* 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g3096 353 PRINTS Tyrosine kinase catalytic domain signature 141 154 IPR001245 GO:0004672|GO:0006468
Apr9g3096 353 PRINTS Tyrosine kinase catalytic domain signature 179 197 IPR001245 GO:0004672|GO:0006468
Apr9g3096 353 PRINTS Tyrosine kinase catalytic domain signature 225 235 IPR001245 GO:0004672|GO:0006468
Apr9g3096 353 PRINTS Tyrosine kinase catalytic domain signature 244 266 IPR001245 GO:0004672|GO:0006468
Apr9g3096 353 PRINTS Tyrosine kinase catalytic domain signature 288 310 IPR001245 GO:0004672|GO:0006468
Apr9g3096 353 PANTHER SERINE-THREONINE PROTEIN KINASE 8 338 - -
Apr9g3096 353 CDD STKc_MAP3K-like 70 317 - -
Apr9g3096 353 SUPERFAMILY Protein kinase-like (PK-like) 52 317 IPR011009 -
Apr9g3096 353 Gene3D Transferase(Phosphotransferase) domain 1 146 343 - -
Apr9g3096 353 Pfam Protein tyrosine and serine/threonine kinase 65 317 IPR001245 GO:0004672|GO:0006468
Apr9g3096 353 Gene3D Phosphorylase Kinase; domain 1 53 144 - -
Apr9g3096 353 ProSiteProfiles Protein kinase domain profile. 63 321 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr9g3096 353 PANTHER SERINE/THREONINE-KINASE HT1-LIKE PROTEIN 8 338 - -
Apr9g3096 353 ProSitePatterns Serine/Threonine protein kinases active-site signature. 185 197 IPR008271 GO:0004672|GO:0006468
Apr9g3096 353 SMART serkin_6 63 321 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g3096 Apr-Chr9 37780625 37783555 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g3096 36 326 MAP Kinase Kinase Kinase AT1G62400 63.390 8.23e-136 390
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Apr9g3096 PK_Tyr_Ser-Thr 9.7e-66 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g3096 - - gmx:100778530 662.144
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g3096 9 37780625 37783555 Apr9g3096 9 37780625 37783555 ECH
Apr1g0821 1 10460520 10465519 Apr9g3096 9 37780625 37783555 PCT