Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g3089 ATGAAGGAAAGCAGTGATGGGTTTGTGAGAGCGGATCAGATTGATCTGAAGAGCATAGATGAACAGCTAGAGAGGCACCTGAACAAGGTTTTGACCATAGAGAAGAAAAAGCGAACAGGGGAAGAGGAAGATAAGCAGAAGCAGGAGTGGGAGATTGATCCTTCTAAACTAATAATCAAGAGTGTTATAGCTCGTGGCACTTTTGGCAAGGTCCATCGGGGTGTCTATGATTCTCAAGATGTTGCTGTGAAATTGTTGGACTGGGGCGAAGAAGGCCAAAGGACAGAAGCAGAAGTCGCTTCCTTGAGGGCAGCGTTTATACAGGAAGTTGCTGTTTGGCATAAACTTGATCATCCCAATGTCACAAAGTTCATAGGGGCAACAATGGGCTCTGCAGAATTGCAGATACAAACTGATGAAGGTCTCATTAGCATGCCAAACAATGTCTGTTGTGTTGTTGTGGAGTATCTTGCTGGTGGTACGCTAAAATCATACCTTATAAAGAACAGGAGGAGGAAATTAGCTTTTAAGGTTGTGATCCAGCTGGCACTTGATCTTGCAAGAGGGCTGAGTTATCTTCACTCTCAGAAGATTGTCCATAGAGATGTAAAGACAGAGAACATGTTGTTGGATAAGACACGCACAGTTAAAATTGCTGATTTTGGGGTTGCACGTGTTGAGGCATCAAATCCTAATGATATGACTGGGGAGACTGGTACTCTTGGTTATATGGCTCCTGAGGTTTTAAATGGCAACCCCTATAACAGGAAATGTGATGTGTACAGTTTTGGCATCTGTTTATGGGAGACATATTGTTGTGACATGCCATATCCTGACCTAAGTTTCTCAGAAATTACTTCAGCTGTTGTTCGCCAGAATTTAAGACCAGAAATCCCAAGATGTTGCCCAAGTTCTCTAGCACATGTAATGAAGAAGTGCTGGGATGCCACTCCTGATAAACGGCCGGAGATGGACGAGGTTGTTTCCATGCTGGAGGCCATTGACACATCCAAAGGTGGAGGTATGATCCCTCTTGATCAGCAGCAGGGTTGTCTTTGCTTCCGCAAATATAGAGGGCCTTGA 1083 0.4423 MKESSDGFVRADQIDLKSIDEQLERHLNKVLTIEKKKRTGEEEDKQKQEWEIDPSKLIIKSVIARGTFGKVHRGVYDSQDVAVKLLDWGEEGQRTEAEVASLRAAFIQEVAVWHKLDHPNVTKFIGATMGSAELQIQTDEGLISMPNNVCCVVVEYLAGGTLKSYLIKNRRRKLAFKVVIQLALDLARGLSYLHSQKIVHRDVKTENMLLDKTRTVKIADFGVARVEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWETYCCDMPYPDLSFSEITSAVVRQNLRPEIPRCCPSSLAHVMKKCWDATPDKRPEMDEVVSMLEAIDTSKGGGMIPLDQQQGCLCFRKYRGP* 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g3089 360 Gene3D Phosphorylase Kinase; domain 1 45 140 - -
Apr9g3089 360 ProSiteProfiles Protein kinase domain profile. 57 334 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr9g3089 360 CDD STKc_MAP3K-like 63 331 - -
Apr9g3089 360 ProSitePatterns Serine/Threonine protein kinases active-site signature. 198 210 IPR008271 GO:0004672|GO:0006468
Apr9g3089 360 Gene3D Transferase(Phosphotransferase) domain 1 158 349 - -
Apr9g3089 360 SUPERFAMILY Protein kinase-like (PK-like) 43 331 IPR011009 -
Apr9g3089 360 PANTHER DUAL-SPECIFICITY KINASE TKL-PL-4 FAMILY-RELATED 1 45 - -
Apr9g3089 360 PANTHER DUAL-SPECIFICITY KINASE TKL-PL-4 FAMILY-RELATED 45 354 - -
Apr9g3089 360 PRINTS Tyrosine kinase catalytic domain signature 154 167 IPR001245 GO:0004672|GO:0006468
Apr9g3089 360 PRINTS Tyrosine kinase catalytic domain signature 192 210 IPR001245 GO:0004672|GO:0006468
Apr9g3089 360 PRINTS Tyrosine kinase catalytic domain signature 258 280 IPR001245 GO:0004672|GO:0006468
Apr9g3089 360 PRINTS Tyrosine kinase catalytic domain signature 302 324 IPR001245 GO:0004672|GO:0006468
Apr9g3089 360 SMART serkin_6 57 334 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr9g3089 360 Coils Coil 16 36 - -
Apr9g3089 360 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 45 354 - -
Apr9g3089 360 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 1 45 - -
Apr9g3089 360 PIRSF ILK 6 340 - -
Apr9g3089 360 Pfam Protein tyrosine and serine/threonine kinase 59 331 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g3089 Apr-Chr9 37680727 37685483 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g3089 6 360 MAP Kinase Kinase Kinase AT3G22750 69.382 0.0 538
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Apr9g3089 PK_Tyr_Ser-Thr 5e-63 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g3089 - - gmx:100807921 677.552
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g0827 1 10682177 10686832 Apr9g3089 9 37680727 37685483 ECH
Apr9g3089 9 37680727 37685483 Apr9g3089 9 37680727 37685483 ECH