Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g3072 ATGTCGCTCAAGAGGCGCCCCGACGATGGCAAGACTCCAGACGACAAGCGTCGAAAGCCTCCTCCGTTCTCCAGTGTGGTGCTTGAGGTGATGAAGTTACAATCTGTCAGTCATTTGCTGGAGCCAATTCTAGAGCCCTTGGTTCGTCGAGTGGTTAAGGAGGAAGTTGAATCGGCCCTAAAGAGGCATTTGACCAGCATGAAACAGACCTGTGGAAAGGAGTTCCGCACTACTGAATTAAGAAGTTTGCAGCTGCAGTTTGAAAACAGCATTTCACTTCCTGTCTTTACAGGAGCTCGAATTGAAGGAGAGGATGGCTCCAACTTAAGGATAAGTTTAGTTGATGCCCTAACAGGGAAAGTTGTTAGTACAGGACCTGAATCTTCAGCTAAGGTGGAAATTGTGGTCCTTGAGGGTGATTTTGAAGAAGAAAGTGACATTTGGATGCCTGAAGAGTTCAAGAGCAATATTGTGAGAGAGAGGGAAGGAAAAAAGCCCCTTCTTACAGGAGATGTAATTTTATATCTTAAAGATGGGATCGGTATGGTGGGTGAAATTTCATATACAGATAATTCAAGCTGGACAAGGAGCCGAAGGTTCAGGCTTGGGGCAAGAGTTGTGGACAACTTTGATGGTGTTAGAATAAGGGAAGCAAAGACGGAGTCATTTATTGTCAGGGATCACAGAGGAGAACTATACAAGAAGCACCATCCTCCTAGTCTGTCTGATGAAGTTTGGAGATTGGAAAAAATAGGCAAGGATGGAGCTTTCCACAAGCGTTTGAGTCGTGAAAAGATCCATACTGTTAAAGATTTTCTCACACTTCTCAACCTGGATCCAGCAAAGCTGCGCAGTATACTGGGCACTGGAATGTCTGCAAAGATGTGGGAAGTAACTGTGGAGCATGCTCGAACTTGTGTACTTGATTCGACAAGGTATCTTTACTTTCCTTCTCATTCTCAACAACCTGGTGTGGTCTTCAATGCTGTTGGACAAGTGACAGGACTGCTTTCGGAATGCGAGTATGCCCCAGTAGATAAGCTGTCTGAAACTGAAAAGGCTGATGCTCAAAACTCGGTTATTACTGCAATAAGACAAGGGGAGAAGTATGCCACTTTTGAAGATGAAACCTCACTCATGGATGGGTCTTCAAACTTAACTAATGTTCTCTACTCCCCAAGCTCTCCCAAGACTGAGGGATCAAGTGCCAACAAGCTTTTGGTTCCCCACAAGACTGAAGGATTCAATTACACACAAGCAAGTGCATCTTCTCCAGATATCATGTCATCCATTTATTCTGTTGGTGGAAGTAGTAGCTTGGATGAATATTGCTTGCCTCATTTTGACAGCATGGGGCTTAGATATGATCCTCTTAGTTTCCCAGTCCAAGTCTCCAACTCTTTGATCTGTGACACAGATTCAATGGCCCATGCTTTTAGTGATGAAGATCATCTGCAATTTTTTGATACTGATCTTCAATCTCAGTGCCACATTCAAGCAGATTTACAGAGTGCTGTCGATAGCTTCATGCTGGCACGATCTACATCCACGGTCAATTGTGCACAAAGGAGATGGAGAAAGGTATTCAATGTCCTAAAATGGTTCATGGTTAGGAAACGAGGAAACCAAAGATACAGGTAA 1641 0.4394 MSLKRRPDDGKTPDDKRRKPPPFSSVVLEVMKLQSVSHLLEPILEPLVRRVVKEEVESALKRHLTSMKQTCGKEFRTTELRSLQLQFENSISLPVFTGARIEGEDGSNLRISLVDALTGKVVSTGPESSAKVEIVVLEGDFEEESDIWMPEEFKSNIVREREGKKPLLTGDVILYLKDGIGMVGEISYTDNSSWTRSRRFRLGARVVDNFDGVRIREAKTESFIVRDHRGELYKKHHPPSLSDEVWRLEKIGKDGAFHKRLSREKIHTVKDFLTLLNLDPAKLRSILGTGMSAKMWEVTVEHARTCVLDSTRYLYFPSHSQQPGVVFNAVGQVTGLLSECEYAPVDKLSETEKADAQNSVITAIRQGEKYATFEDETSLMDGSSNLTNVLYSPSSPKTEGSSANKLLVPHKTEGFNYTQASASSPDIMSSIYSVGGSSSLDEYCLPHFDSMGLRYDPLSFPVQVSNSLICDTDSMAHAFSDEDHLQFFDTDLQSQCHIQADLQSAVDSFMLARSTSTVNCAQRRWRKVFNVLKWFMVRKRGNQRYR* 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g3072 546 PANTHER OS02G0177800 PROTEIN 8 541 IPR012416 GO:0005516
Apr9g3072 546 Pfam Calmodulin binding protein central domain 240 306 IPR046830 -
Apr9g3072 546 Pfam Calmodulin binding protein-like N-terminal domain 83 228 IPR046831 -
Apr9g3072 546 MobiDBLite consensus disorder prediction 1 22 - -
Apr9g3072 546 Pfam Calmodulin binding protein C-terminal domain 312 369 IPR046829 -
Apr9g3072 546 PANTHER CALMODULIN-BINDING PROTEIN 60 A 8 541 - -
Apr9g3072 546 MobiDBLite consensus disorder prediction 1 23 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g3072 Apr-Chr9 37540951 37546114 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g3072 1 354 Calmodulin-binding Proteins AT5G62570 61.773 8.12e-158 453
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g3072 - - ccaj:109807600 941.414
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g3072 9 37540951 37546114 Apr9g3072 9 37540951 37546114 ECH