Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g3065 ATGAGCATCCCAATTCCCAATCGACAATTATTCATAAACGGAGAATGGAAAGCTCCCGCACTCAACAAACGGATTCCCATCATCAACCCCTCCACCCAACAAATCATCGCGGCTACGAAGGAAGATGTGGACCTCGCTGTGGTTGCTGCCAGAGCAGCCCTCTCTCATAACAAGGGCGCTGATTGGGCCTCAGCTTCGGGCTCGGTTCGGGCCCGCTATCTCCGCGCCATCGCTGCCAAGATTACCGAGAAAAAGTCTGAGCTGGCAAAACTGGAAGCCATCGATTGTGGAAAACCCCTCGATGAAGCCGCATGGGACATGGATGATGTTGCTGGTTGCTTTGAATTCTATGCTGATCTTGCTGAGAAACTGGATGCAAAGCAAAAAGCTCCAGTGTCTCTTCCCATGGACACATTCAAGAGTTATGTCCTTAAGGAGCCCATTGGGGTTGTTGGCTTAATAACTCCCTGGAATTATCCTCTGTTGATGGCTACGTGGAAGGTTGCTCCCTCTCTCGCTGCTGGTTGTGCTGCAATATTGAAGCCTTCTGAACTGGCCTCTGTGACCTGTTTGGAGTTGGGTGAAATATGCAGAGAAGTGGGTCTTCCACCCGGTGTATTGAACATCCTCACTGGATTAGGTCCTGAAGCTGGTGCTCCTTTAGCAGCCCATCCTGATGTTGACAAGATTGCCTTTACGGGAAGCTCTGCAACTGGGAGCAAGATTATGACGGCTGCAGCTCAGCTGGTCAAGCCTGTTTCGCTAGAGCTTGGTGGAAAAAGCCCAATCATTGTTTTTGAGGATGTTGACCTTGATAAAGCTGCTGAATGGACCATCTTTGGCTGCTTCTGGACAAATGGTCAGATATGCAGTGCAACTTCCCGACTTATTGTACATGAAAGTATAGCAACAGAATTTTTGAATAGGATGGTGAAATGGATAAAAAACATCAAAATTTCTGATCCCTTCGAAGAAGGCTGCAGGCTGGGCCCTATTGTTAGTGAAGGACAGTATGAAAAAGTAATGAAATTTATCGCAAATGCTAAGAGTGAGGGTGCAACCATTTTGACTGGTGGGTCTCGCCCAGAGCATCTAAAGAAGGGATTCTTTGTTGAACCAACTCTCATAACTGATGTGACTACCTCCATGCAAATTTGGAGAGAAGAAGTATTTGGACCTGTTCTCTGTGTCAAAACATTTAGCACTGAGGAAGAAGCTATTGATCTTGCAAATGACACCATATATGGCTTAGGTTCTGCTGTAATATCAAATGATCTAGAAAGATGTGAACGCATTACCAAGGCTTTTAAGGCTGGAATTGTATGGATTAATTGCTCTCAACCGTGCTTCACTCAAGCCCCATGGGGAGGCATTAAACGTAGCGGTTTTGGTCGTGAATTAGGAGAATGGGGACTTGATAATTACTTAAGCGTGAAGCAAGTGACTCAGTATATCTCTGATGAACCATGGGGCTGGTACCAGTCTCCTTCAAAGCTGTGA 1500 0.4633 MSIPIPNRQLFINGEWKAPALNKRIPIINPSTQQIIAATKEDVDLAVVAARAALSHNKGADWASASGSVRARYLRAIAAKITEKKSELAKLEAIDCGKPLDEAAWDMDDVAGCFEFYADLAEKLDAKQKAPVSLPMDTFKSYVLKEPIGVVGLITPWNYPLLMATWKVAPSLAAGCAAILKPSELASVTCLELGEICREVGLPPGVLNILTGLGPEAGAPLAAHPDVDKIAFTGSSATGSKIMTAAAQLVKPVSLELGGKSPIIVFEDVDLDKAAEWTIFGCFWTNGQICSATSRLIVHESIATEFLNRMVKWIKNIKISDPFEEGCRLGPIVSEGQYEKVMKFIANAKSEGATILTGGSRPEHLKKGFFVEPTLITDVTTSMQIWREEVFGPVLCVKTFSTEEEAIDLANDTIYGLGSAVISNDLERCERITKAFKAGIVWINCSQPCFTQAPWGGIKRSGFGRELGEWGLDNYLSVKQVTQYISDEPWGWYQSPSKL* 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g3065 499 PANTHER BETAINE ALDEHYDE DEHYDROGENASE 1 499 - -
Apr9g3065 499 CDD ALDH_F10_BADH 27 483 - -
Apr9g3065 499 Pfam Aldehyde dehydrogenase family 20 481 IPR015590 GO:0016491
Apr9g3065 499 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 24 479 IPR016162 GO:0016491
Apr9g3065 499 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 255 262 IPR029510 GO:0016491
Apr9g3065 499 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 263 454 IPR016163 GO:0016620
Apr9g3065 499 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 283 294 IPR016160 GO:0016491
Apr9g3065 499 Coils Coil 74 94 - -
Apr9g3065 499 SUPERFAMILY ALDH-like 5 485 IPR016161 GO:0016491
Apr9g3065 499 PANTHER NAD-DEPENDENT ALDEHYDE DEHYDROGENASE FAMILY PROTEIN 1 499 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g3065 Apr-Chr9 37458174 37462579 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g3065 1 497 Aldehyde Dehydrogenase Gene Family AT1G74920 82.093 0.0 874
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g3065 K00130 - gmx:100170731 939.102
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g3065 9 37458174 37462579 Apr9g3065 9 37458174 37462579 ECH
Apr9g3065 9 37458174 37462579 Apr1g0857 1 11427189 11433451 PCT