Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g3060 ATGGCTGTCGTCGGCGAAGTTTTCCGGCACAACTTGACGGAGGAGTCGCCTTCTGGTGCTCCCGAACTTCATGTTCTGGCTGTTGATGACAGCCTCGTTGATCGCAAGGTTATTGAGCGTTTGCTGAAGATTTCTTCTTGCAAAGTGACGGTTGTGGAGAGCGGAACGCGAGCGCTTCAGTATTTGGGGCTGGATGGAGAGAACGGTTCTCTCGGGTTTGATAGTGTTAAGGTTAATCTGATAATGACGGATTATTCCATGCCGGGGATGACGGGATACGAATTACTCAAGAAAATTAAGGAATCTTCTGTGTTTAGAGAGATCCCTGTGGTGATCATGTCGTCGGAGAATATTTTGACTCGAATTGATAGGTGCCTGGAGGAAGGAGCAGAGGATTTTCTGTTGAAGCCCGTCAAGTTGTCTGACGTAAAACGTCTAAAAGATTTCATCATGAGAGGTAAAGTGAATGAAGGAGAGAAAAGATCTCACAAAAGAAGGAGATCAATTGATTGCAGTCAGTCTGTGTCAACGACATGCTCAGCAATGTCTCATCCATGCGATCCATCATCAATACTGTCACCATTATCACCATCCACATTATCCTCAAAGAAGTCTAGATTGTGA 624 0.4519 MAVVGEVFRHNLTEESPSGAPELHVLAVDDSLVDRKVIERLLKISSCKVTVVESGTRALQYLGLDGENGSLGFDSVKVNLIMTDYSMPGMTGYELLKKIKESSVFREIPVVIMSSENILTRIDRCLEEGAEDFLLKPVKLSDVKRLKDFIMRGKVNEGEKRSHKRRRSIDCSQSVSTTCSAMSHPCDPSSILSPLSPSTLSSKKSRL* 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g3060 207 ProSiteProfiles Response regulatory domain profile. 24 151 IPR001789 GO:0000160
Apr9g3060 207 PANTHER TWO-COMPONENT RESPONSE REGULATOR 8 207 IPR045279 GO:0009736
Apr9g3060 207 Pfam Response regulator receiver domain 25 143 IPR001789 GO:0000160
Apr9g3060 207 SMART REC_2 23 147 IPR001789 GO:0000160
Apr9g3060 207 Gene3D - 23 185 - -
Apr9g3060 207 MobiDBLite consensus disorder prediction 183 207 - -
Apr9g3060 207 PANTHER TWO-COMPONENT RESPONSE REGULATOR ARR3-LIKE PROTEIN 8 207 - -
Apr9g3060 207 CDD REC_typeA_ARR 25 146 - -
Apr9g3060 207 SUPERFAMILY CheY-like 22 159 IPR011006 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g3060 Apr-Chr9 37405090 37407372 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g3060 23 165 Response Regulator Gene Family AT3G48100 79.167 6.78e-79 232
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Apr9g3060 Response_reg 6e-21 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g3060 K14492 - gmx:100796843 325.865
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g0863 1 11508439 11511089 Apr9g3060 9 37405090 37407372 ECH
Apr9g3060 9 37405090 37407372 Apr9g3060 9 37405090 37407372 ECH