Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g3059 ATGTCAGCCCCTAGTCAAGCAATTGTAGTGGCAGTAGTAGCTACAGCAGCAACTATGCTACTTCTTGCTTTGATGTCCTTCTACTTCTTCCAAAAATTTGCCCTTGATCGATACCACCTTAGACACAAAATTGCAGCTAGTCTTTTTAGAGAAGCGGGAATGGACCATGAGGATATAAAGAAAGTTAGTGGTAACATGAAAGGGTTACTTGTTGAAGAAAATGGTATTGATATTCTGTATATGATGGAAACTGAAGGTAGGATATTCAAAACTAGATTCCCAAATAGAAGATATAATCCTAGTTATGAAGATGATGAAGAAAAGAGAACAGATATGATGGTCCAAAGATCCAAACGAATTAAGCCTCAGGTGGTTACAGTTCCACTGCTATGTGACTCTTCAGGTCCAGGTTTGATTTATCATGAGAATCAAGATACATCACTATCACAAGTATCTTCTCTACCTTACTCAACGTCGTTATCATTAACTTCAGCTCAACACCTTCCACAATCACCTCGGCCACCACCTCCACTTCCATCAATTCCACAAACTTCACCAATGATTATGGAGAAGAAAACTATACCATTTTCACCACCAGCTCCTCCTCCTCCTCCTCCACCACCACCACCACCACCACCTTCCCCTCCAAGAAAGGAGGTTCCAAATGCACCACCTCTTCCTTCATTACCACCTAAAGGGAAAGCAAACACAAACACCACAGAGGCTATGGTAGGGAAGAGCTCAAGAGGGAAGGGTGCTGTTCAAACAAGGCTGAAGCCTCTGTATTGGGATAAGGTGGTAACTAATGTTGATCATTCAACTGTGTGGGATCAAATCAATAATGGCTCTTTCCAGTTTGATTATGAACTCATGGAAACACTCTTTGGATATTCAACTAACAGACAAACCCATGAAAGAAATAGGTGTCTTTCAACTTCAGCTAAGTCCAACTCCAACACACCAACTCAAGTATTCATTCTGGACCCTCGAAAATCCCAAAACACTGCCATAGTCCTAAGATCTCTTTCAATGTCTCACAAGGGTATCCTAGATGCACTCCTCGATGGTCAAGGACTCAGTGCTGAGACACTTGAAAGACTCACTAACATAGCTCCTATCCAAGAAGAAGAAACAAAAATCATTCAATTCAGTGGAAACCCAGATAAACTTGCTGATGCTGAGTCATTCCTCTACTACATTCTGAGAGCAGTTCCAACAGCTTTCGTTCGTTTAAAAGCACTGCTTTTCAGCTCAAGTTATGATTGTGAAGTTATTCAGCTTAAAGAACACCTAAAAACTCTTGAAATCGGTTGTGAAGAGGTGAAGACTAGTGGTCTGCTTTTGAAATTCCTTGAAGCCATTCTCAAAGCTGGAAACCAAATGAATGCAGGAACTTCAAGAGGCAGCGCCTATGGTTTCAACTTAAGTGCTCTTAAAAAGCTTTCTGATGTAAAAAGCACAGATGGGAAAACTAGTTTGCTTCACTTTATTGTGGAGCAGGTAGCTTATTCTGAAGGAAAACAACAAGCTATCAATCAAAAGCACAACCTTCACAAAAGCATTGGTGAAATAAGCAACACCAGTGGGCCTTATTCAGGTAGCCTGATAGAACAAGAAACAGAAAGAGAGTATCTAAAGCATGGTTTAATAGTGTTAGGAGGGCTAAGGGATGAGTTATCTGAAGTAAAGAAAGCAGCAAGTATTGAACACCATAATTTTATTAGTATGTACTCTACTCTCAATGCTTATGTTACTGAAATTCGACAGATTATAACATGCTGTGGCAACAGTGAAAGAGGTGGATTTATTAAGGCAATGAAAGGATTTGTAGAGGAATGTGAAGAGGAGCTTAATGTGGTGAGAGAGGAACAGACACGGATCACGGAACTGGTCAAGAAAACCAATGAGTATTTTCTAACAGGAGATTCCATAGATAACATGTCAAACCCCTTTCAACTGTTTGCTACTGTAAAAGAATTTGTTGACATGGTAGATGATGTTTGCATAGAACTTAGAAGGAAACTAGAAAAGAATAATGTAGGAGAATCTGTATCAACACCGCCTCTTTCACCATCAAATAGGGTGCCACTCAGATTACCAAACTTTGATTTACATTTCCAGTCAAGTAGGTCAGTAGCTTCATCTTCCAGCCAATCAGATGATAATTTCTGA 2172 0.4001 MSAPSQAIVVAVVATAATMLLLALMSFYFFQKFALDRYHLRHKIAASLFREAGMDHEDIKKVSGNMKGLLVEENGIDILYMMETEGRIFKTRFPNRRYNPSYEDDEEKRTDMMVQRSKRIKPQVVTVPLLCDSSGPGLIYHENQDTSLSQVSSLPYSTSLSLTSAQHLPQSPRPPPPLPSIPQTSPMIMEKKTIPFSPPAPPPPPPPPPPPPPSPPRKEVPNAPPLPSLPPKGKANTNTTEAMVGKSSRGKGAVQTRLKPLYWDKVVTNVDHSTVWDQINNGSFQFDYELMETLFGYSTNRQTHERNRCLSTSAKSNSNTPTQVFILDPRKSQNTAIVLRSLSMSHKGILDALLDGQGLSAETLERLTNIAPIQEEETKIIQFSGNPDKLADAESFLYYILRAVPTAFVRLKALLFSSSYDCEVIQLKEHLKTLEIGCEEVKTSGLLLKFLEAILKAGNQMNAGTSRGSAYGFNLSALKKLSDVKSTDGKTSLLHFIVEQVAYSEGKQQAINQKHNLHKSIGEISNTSGPYSGSLIEQETEREYLKHGLIVLGGLRDELSEVKKAASIEHHNFISMYSTLNAYVTEIRQIITCCGNSERGGFIKAMKGFVEECEEELNVVREEQTRITELVKKTNEYFLTGDSIDNMSNPFQLFATVKEFVDMVDDVCIELRRKLEKNNVGESVSTPPLSPSNRVPLRLPNFDLHFQSSRSVASSSSQSDDNF* 724
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g3059 723 Coils Coil 610 630 - -
Apr9g3059 723 MobiDBLite consensus disorder prediction 169 183 - -
Apr9g3059 723 SMART it6_source 248 679 IPR015425 -
Apr9g3059 723 MobiDBLite consensus disorder prediction 162 253 - -
Apr9g3059 723 Pfam Formin Homology 2 Domain 255 664 IPR015425 -
Apr9g3059 723 PANTHER FORMIN-LIKE PROTEIN 2 718 - -
Apr9g3059 723 SUPERFAMILY Formin homology 2 domain (FH2 domain) 203 677 - -
Apr9g3059 723 ProSiteProfiles Formin homology-2 (FH2) domain profile. 248 690 IPR015425 -
Apr9g3059 723 Gene3D Formin, FH2 domain 270 683 IPR042201 -
Apr9g3059 723 PANTHER FORMIN-RELATED 2 718 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Apr9g3059 723 MobiDBLite consensus disorder prediction 195 231 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g3059 Apr-Chr9 37401465 37403747 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g3059 6 721 FH2 protein (formin) Gene Family AT1G70140 35.436 6.60e-138 422
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g0864 1 11514026 11516434 Apr9g3059 9 37401465 37403747 ECH
Apr9g3059 9 37401465 37403747 Apr9g3059 9 37401465 37403747 ECH