Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g3053 ATGGCGTCGGCATTGGAGAAGAAGAAAAGCCTTCACTCCCTAATGGCCGCGCACCTCAGCAAGCTCACTATCCCACCTTCTTCTTCTGACCCGAACCCATCCCCATCCATGACCAGCCCCCGCGTCATCCACAGTAGGTCCCACTCCTTCGTGGGTCCCTCCCCTCGCTTCGCCCCCTCCCCCAATCCCCTCTTCTTCCTCCACGAAGATGAAGATGACGACTCCGAACCCGACGATAACCAACCAGTGACCGTCCCCGTCACTACCCACCCTTCCCAGGCCCCTAAAATGGCACCTTCTGACTTCCATATTCTTAGAGTTGTAGGGCAGGGTGCCTTTGGTAAGGTCTTTCTTGTTAGGAAAAAGGGTATTGATTGCTCTGACGGTGATGGGGTCTTCGCCATGAAAGTTATGAGGAAAGACACCATCATTAAGAAAAATCACGTTGATTACATGAAAGCCGAGAGAGATATTCTCACTAAAGTCATTCACCCTTTTATCGTTCAGCTCCGCTACTCTTTCCAGACAAAATCTAAATTATATTTGATCTTGGACTTCATTAATGGAGGCCATCTTTTCTTTCATCTCTATCGCCAGGGTATTTTCAGTGAGGATCAGGCAAGGATTTACACTGCTGAGATAGTGTCTGCTGTTGCACATCTTCACAAGAACGGCATCGTCCATCGGGATCTTAAACCTGAAAACATTCTTATGGATGCCCATGGCCATGTGATGCTAACTGATTTTGGACTGTCTAAAGAAATCGACCAATTCGGCAGATCCAACTCTATGTGTGGGACCACTGAGTATATGGCTCCTGAAATCTTACTGGGTAAAGGCCATAACAAGGATGCAGATTGGTGGAGTGTTGGTATTCTCTTGTATGAAATGCTAACAGGGAAGGCACCATTTACGCACAATAACAGAAAGAAACTTCAGGAGAAAATTATTAAAGAAAAACTTAAACTGCCTCCTTTCCTTACCAGTGAAGCTCACTCTTTGCTAAAAGGATTGCTGCAAAAGGATCCATCGACAAGGTTGGGCAGTGGGCCAAATGGAGATGACCAGATCAAAAGTCATAAATGGTTTAGGTCAATCAATTGGAACAAACTGGAGGCAAGAGAACTGGAACCAAAGTTTAAACCAGATGTTTCTGGGAAAGATTGCACAGCTAATTTTGACCAATGTTGGACAGCAATGCCTCCTGATGACTCACCAGCACCCACACCCACTGCAGCATGCACGTAA 1248 0.4631 MASALEKKKSLHSLMAAHLSKLTIPPSSSDPNPSPSMTSPRVIHSRSHSFVGPSPRFAPSPNPLFFLHEDEDDDSEPDDNQPVTVPVTTHPSQAPKMAPSDFHILRVVGQGAFGKVFLVRKKGIDCSDGDGVFAMKVMRKDTIIKKNHVDYMKAERDILTKVIHPFIVQLRYSFQTKSKLYLILDFINGGHLFFHLYRQGIFSEDQARIYTAEIVSAVAHLHKNGIVHRDLKPENILMDAHGHVMLTDFGLSKEIDQFGRSNSMCGTTEYMAPEILLGKGHNKDADWWSVGILLYEMLTGKAPFTHNNRKKLQEKIIKEKLKLPPFLTSEAHSLLKGLLQKDPSTRLGSGPNGDDQIKSHKWFRSINWNKLEARELEPKFKPDVSGKDCTANFDQCWTAMPPDDSPAPTPTAACT* 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g3053 415 PANTHER RIBOSOMAL PROTEIN S6 KINASE 12 412 - -
Apr9g3053 415 ProSiteProfiles AGC-kinase C-terminal domain profile. 364 415 IPR000961 GO:0004674|GO:0005524|GO:0006468
Apr9g3053 415 ProSiteProfiles Protein kinase domain profile. 102 363 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr9g3053 415 Gene3D Phosphorylase Kinase; domain 1 100 405 - -
Apr9g3053 415 ProSitePatterns Serine/Threonine protein kinases active-site signature. 226 238 IPR008271 GO:0004672|GO:0006468
Apr9g3053 415 ProSitePatterns Protein kinases ATP-binding region signature. 108 136 IPR017441 GO:0005524
Apr9g3053 415 Pfam Protein kinase domain 102 363 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr9g3053 415 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 12 412 - -
Apr9g3053 415 MobiDBLite consensus disorder prediction 81 95 - -
Apr9g3053 415 SMART serkin_6 102 363 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr9g3053 415 CDD STKc_AGC 108 363 IPR045270 GO:0004674|GO:0005524
Apr9g3053 415 SUPERFAMILY Protein kinase-like (PK-like) 83 408 IPR011009 -
Apr9g3053 415 SMART pkinase_C_6 364 414 IPR000961 GO:0004674|GO:0005524|GO:0006468
Apr9g3053 415 MobiDBLite consensus disorder prediction 16 95 - -
Apr9g3053 415 Gene3D Transferase(Phosphotransferase) domain 1 187 382 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g3053 Apr-Chr9 37326097 37330020 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g3053 24 412 AGC Kinase Gene Family AT3G08720 60.396 3.74e-174 493
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC-Pl Apr9g3053 Pkinase 2.8e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g3053 K04688 - gmx:100798259 625.165