Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g3044 ATGGACGGCGGCGATCCTTCCCTGTCAGATAAAGAGGAGGAGAACGATGAGGAAGACGCGGCGACGGACATTCTGTCGCGAGTCTCACTCGTCGATGCTCCCATACTCTTGTTCGTTTGTTTCCATAAGGCTCTGCGCTCTGAACTTCACCTCCTTCGTCGCTTGGCGGAAACGGCGTCGTTGGAAGACGAACCACGCCCTTGCCGACAATTAGTCCTTCAGCTTCACCGAAGATTCCAGTTCCTGAAACTAGCTCATAAGTATCATTGCGCTGCGGAAGACGAGGTTATCTTCCTTGCACTGGATACACATGTGAAAAATGTCGTATGTACATATTCCCTTGAGCATAGCAGCACCAATGACCTTTTCGATTCCATCTTTCACTTCTTGGATGAGCTGATGGTTCCTGATAAGAATATTTCCGTGCTGTTCCAAGAACTTGTGTATTGCATTGGAATCTTGCAAACCTCCATCTACCAACATATGCTGAAAGAAGAAGAGCAGGTTTTTCCTCTGTTGATGCAGAAATTATCTACTAAAGAACAGGCCTCACTTGTGTGGCAATTCATATGTAGTGTTCCTATAATGTTGCTGGAGGAAATCTTTCCATGGATGGTATCCTTCCTTTCTGCAAACAAACAAACAGAATTTGCCCAGAGTTTAAATGAAATTGCACCAATGGAAAAAGAACTGCAAGAGGTTTTGCTTTCTTGGCTTAGAAGAAATAAACCTATCTTCACTGACACGTGTTTTCCAAGTGAAGAATTTCATGGTGCTGATGAATTCCTACATATAGATAAATCAGTTGGGCTGAATTATTGCAATAAGAACTCCGAAGAAATTTCAAGTAGGATGAAAGTGAATGGTCCAGAAATAGATGAGGTCAACCAGGTTAATGTCCTTCATCTTTGGCATAATGCTATCAAGAAAGATTTGAAAGAAACTCTGAATGAACTTTATCTACTAAGGCAATCCAGCTGCTTTCAGAATTTAGACTCAATACTTGTTCAACTAAAATTCTTTGCCGATATCCTCATCTTCTACAGCAATGCTCAGAAGAAATTCTTTCATCCTGTACTGAATAAACATGCTTATGAATGGTTGTCTAAGTCTATTGAACAATTTGTTAGCCAAAGTCACATTGAAGATATACAACAGTTGCTATTATATAACTCAGAAAGTGGAACAACTTTGAGCACATTTGTGGAGAAGCTTTGCAGAAAACTTGAATCATTTGTATCAGAAGTCAACAAACAATTTGCTTTTCAAGAAGTTAAGGTATTTCCCATCCTTAGAAAGAACTATAGAAGTGGAATGGAAGAGAGACTTCTGAGCTTGAGCCTGCGTATGATGCCTCTTGGTTTACTAAAATGTGTTATAACTTGGTTTTCAGTTCACTTGTCTGAAAAAGAATCCAGGTCCATTCTCTATTACATAAAGAAAGAAAACAATTCTGTCTGTAAAGCTTTTGCATCGCTGTTACATGAGTGGTTCCGCATTGGTTATTCAGGTAAAACCTCTATTGAAAAATTCAGACAAGACTTGCAACACATGTTCAAAAGAAGAGGTTCCTTTTTACCTGAACAAATGAAGGAAGCTCATGGGTTTTCCTTCTTAAATTCTGAGAAGCAGCCTCATAAAGTCTCTGGCCAGAATTGTTCGTCCTACTCCTCATCTTCTGGATCCAGCAATATAAACAAGTATGAGACACCATACTCCACAGGAATTAATCTGCATATATTTTTTCCTGCCACAGTTGTGAAGTTACATCTGCACCCTGCATTACATGCAACAAATCATTCTTCTAATTCCTTTCTTGATGATCCTAAACCAATTGACCTGATATTTTTCTTTCACAAGGCTATGAAGAAAGACTTGGAATACCTAGTTCTTGGCTCAGCTCAGTTAGAAGAAAATGATAAGTTGCTTATGGATTTCCACAAACGATTCCATCTCATATGTTTTCTTCATCAAATCCATAGTGATGCAGAGGATGAGATAGTTTTTCCAGCCTTGGAGACAAGGGGTAAACTTAAAAACATTAGCCATGCCTATGCCTTTGATCACAAACATGAAGTTGAGCACTTTGATAAAATATCTCGCATCCTTGATAAGATGTCTGAATTACATCTTTCAGTTTCTACTACTGATTCAACTATGAGGGAGAAGAGAATGCTAAGGTATCACCATTTATGCAGGAAGTTGCAAGAAAAGTGCAAATCAATGCATAAACTACTTTCAGATCATATAAACCGTGAGGAAATGGAAATTTGGCCTATAATTAGAGAATTCTTCTCAAATCAGGAGCAAGGGAAGATCATAGGATGCATGCTTGGAAGAATAAGAGCAGAAATATTACAAGATATGATACCGTGGTTAATGGCATCTCTAACACAGGAAGAACAACATGTTTTAATGTTCTTATGGTCCATGGCTACTAAAAATACAATGTTTGATGAATGGTTAGGTGAATGGTGGGATGGGTATAGTTTAACTAAGGAAACAGAGGGATCACATGATGCCCCTCTACATCCTGTTGAGCCACTGGAGATCATATCCAAATATTTATCTGAAGAAATTCTAAACGAACTACAAGAAGAATCATCTGCCAACAAAAACATAAATAGTCTGCAGAAGGATCATATTGGTGATAATGTTGAGCTGCCTAACTATTACTTTGACAATAAAGTAAAGGTTAATAATGCGGAACAAAATAATAATCAGTGCTCAAAATGCACAAATCAATCTGATGATAATAACAAACATACTTGCAATGAAGTAGGAAATATCACAAATCTAGTAAGTAATGAAGGTAAGTCTTCTCATCCTTGTGACAAGTCCAGGCACTATGACCGACTTCTGAAATTGAGTCAAGATGATTTGGAGATGGCAATAAGAAGGGTGTCTCGTGACTCTTGCTTAGATCCTCAAAAAAAGTCATATATAGTACAGAATATATTGATGAGCCGTTGGATTATTAGACAGAAGATATCTTCTACAGAAGTCAATATCAAAAGTGATGGACAGGAATTTCCTGGGAATCATCCATCTTACAGGGATCCTCTCAAACTAATCTACGGTTGTAAACACTACAAGAGAAACTGTAAGCTCTTTGCTCCTTGTTGCAACCAACTTTATACTTGCATACATTGCCATAATGAAGAATCAGATCATTCAATTGACAGAAAATCTATTAAAAAGATGATGTGTATGAAGTGCTTGATGATTCAACCAATCAGTGGCACATGCTCAACAATTTCTTGTAATTTATCCATGGCAAAATATTACTGCAGGATCTGCAAATTATTTGATGATGAAAGGTACTTTCTTGTATTTTTTTTCCCCCTACCAACATCCACCAAATACAGAAACAATTTTAGTAGCATTTGTAATGCACTTTCCAGGAATATACCTGCTTTAAATATACCTGCCCAATATGTAGCAAGTCACTTGGAGACATGCAGGTATATTTTAGGATGTTGGATGCATTATTGGCTGAAGAGAAAAATTCTGATGTGCTTTCGAGTCAAACTCAGGTTATATTGTGTAATGACTGTGAAAAGAAAGGAGCGGCCACCTTCCACTGGCTCTACCACAAATGCCCTTATTGTGGTTCCTACAACACTAGAGTTCTATGATTCTTCCATTGAGAGCATAAAGTTGCTTCTCCTTAGCTCTTTTGTATTTAAAAGCATTAGATTGTATTATTATATTTAA 3717 0.3769 MDGGDPSLSDKEEENDEEDAATDILSRVSLVDAPILLFVCFHKALRSELHLLRRLAETASLEDEPRPCRQLVLQLHRRFQFLKLAHKYHCAAEDEVIFLALDTHVKNVVCTYSLEHSSTNDLFDSIFHFLDELMVPDKNISVLFQELVYCIGILQTSIYQHMLKEEEQVFPLLMQKLSTKEQASLVWQFICSVPIMLLEEIFPWMVSFLSANKQTEFAQSLNEIAPMEKELQEVLLSWLRRNKPIFTDTCFPSEEFHGADEFLHIDKSVGLNYCNKNSEEISSRMKVNGPEIDEVNQVNVLHLWHNAIKKDLKETLNELYLLRQSSCFQNLDSILVQLKFFADILIFYSNAQKKFFHPVLNKHAYEWLSKSIEQFVSQSHIEDIQQLLLYNSESGTTLSTFVEKLCRKLESFVSEVNKQFAFQEVKVFPILRKNYRSGMEERLLSLSLRMMPLGLLKCVITWFSVHLSEKESRSILYYIKKENNSVCKAFASLLHEWFRIGYSGKTSIEKFRQDLQHMFKRRGSFLPEQMKEAHGFSFLNSEKQPHKVSGQNCSSYSSSSGSSNINKYETPYSTGINLHIFFPATVVKLHLHPALHATNHSSNSFLDDPKPIDLIFFFHKAMKKDLEYLVLGSAQLEENDKLLMDFHKRFHLICFLHQIHSDAEDEIVFPALETRGKLKNISHAYAFDHKHEVEHFDKISRILDKMSELHLSVSTTDSTMREKRMLRYHHLCRKLQEKCKSMHKLLSDHINREEMEIWPIIREFFSNQEQGKIIGCMLGRIRAEILQDMIPWLMASLTQEEQHVLMFLWSMATKNTMFDEWLGEWWDGYSLTKETEGSHDAPLHPVEPLEIISKYLSEEILNELQEESSANKNINSLQKDHIGDNVELPNYYFDNKVKVNNAEQNNNQCSKCTNQSDDNNKHTCNEVGNITNLVSNEGKSSHPCDKSRHYDRLLKLSQDDLEMAIRRVSRDSCLDPQKKSYIVQNILMSRWIIRQKISSTEVNIKSDGQEFPGNHPSYRDPLKLIYGCKHYKRNCKLFAPCCNQLYTCIHCHNEESDHSIDRKSIKKMMCMKCLMIQPISGTCSTISCNLSMAKYYCRICKLFDDERYFLVFFFPLPTSTKYRNNFSSICNALSRNIPALNIPAQYVASHLETCRYILGCWMHYWLKRKILMCFRVKLRLYCVMTVKRKERPPSTGSTTNALIVVPTTLEFYDSSIESIKLLLLSSFVFKSIRLYYYI* 1239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g3044 1238 CDD Hr-like 41 171 - -
Apr9g3044 1238 SUPERFAMILY CHY zinc finger-like 1019 1084 IPR037274 GO:0008270
Apr9g3044 1238 PANTHER RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 25 1107 - -
Apr9g3044 1238 Pfam CHY zinc finger 1028 1102 IPR008913 GO:0008270
Apr9g3044 1238 Pfam Hemerythrin HHE cation binding domain 42 173 IPR012312 -
Apr9g3044 1238 CDD Hr-like 613 759 - -
Apr9g3044 1238 ProSiteProfiles Zinc finger CHY-type profile. 1021 1090 IPR008913 GO:0008270
Apr9g3044 1238 Gene3D nmb1532 protein domain like 607 778 - -
Apr9g3044 1238 Gene3D nmb1532 protein domain like 294 443 - -
Apr9g3044 1238 Gene3D nmb1532 protein domain like 33 191 - -
Apr9g3044 1238 PANTHER AMINOACYLTRANSFERASE, E1 UBIQUITIN-ACTIVATING ENZYME-RELATED 25 1107 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g3044 Apr-Chr9 37236804 37250712 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g3044 33 854 C2H2 Transcription Factor Family AT3G18290 32.453 2.33e-124 413
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g3044 K16276 - gmx:100802706 1853.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g3044 9 37236804 37250712 Apr9g3044 9 37236804 37250712 ECH