Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g3043 ATGACCCTTAAGGGTGGCACAACCCAAGCCTGTGCGGCATGCAGATACCAAAGAAGAAAGTGCATTCCTGAATGTCCCCTTGCACCTTACTTCCCTGCAGACCAACCTAAGGTGTTTCATAATGTCCACAAGCTCTTTGGAGTGAGCAACATCATAAAGTTATTAAAGATCTTGGAGCCTAGTCAAAAGAAAATAGCTATGGACTCTATCATTATTCAAGCAAATTATAGGGATAAGTATCCTGTGCATGGCTGTTGGGAGGAAATTTGTAGGCTACAATACCAAATATGGCTTGTGGAAGAGGAGCTTCATGCAGTTTATCAACAGCTTGAAATATGCAGGCAACAACATCAGCATCAAGGTCCCTCCATGCCTGATGATGTGACTTCACAACTAGAATTAGGCATGGCACCAAGTACTAATAATAACGCACTTCCACTCTTTAATCATCATACTCCACAACCACACACTTACAATTCTGTGGCTTCTTTGTCCGTGTCACAACATTCCTACTCCAACAGCAATAGCGTGGATTATAACTCAACTTACTTGGATTCCAAGGATAACAACAAAAATCCTTTTTGGGTTCAGTACCCTTATGCAAATAACAGTAGCAATTCTGGAATGCAAAATCAGTCGGTTGCCTCACAGCCACTAGCCATCCTACAAGGTGTTGAGGATTATGATGAGATGCACCCATTTTTTGATGCAGTTGATGATAGACAATCATACATTTATTCCAAGGAGGCTTATGAGTCAAGCTCAGAAGAATCAGTGAAAAATACGAGAAAATGCACTGAGCATGTTTCTGAAAATGATATTGTGATCTATGCTGCAGCATGCTTCAGCCTTACCAGTGTCAACTGA 867 0.4129 MTLKGGTTQACAACRYQRRKCIPECPLAPYFPADQPKVFHNVHKLFGVSNIIKLLKILEPSQKKIAMDSIIIQANYRDKYPVHGCWEEICRLQYQIWLVEEELHAVYQQLEICRQQHQHQGPSMPDDVTSQLELGMAPSTNNNALPLFNHHTPQPHTYNSVASLSVSQHSYSNSNSVDYNSTYLDSKDNNKNPFWVQYPYANNSSNSGMQNQSVASQPLAILQGVEDYDEMHPFFDAVDDRQSYIYSKEAYESSSEESVKNTRKCTEHVSENDIVIYAAACFSLTSVN* 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g3043 288 Pfam Lateral organ boundaries (LOB) domain 10 106 IPR004883 -
Apr9g3043 288 PANTHER LOB DOMAIN-CONTAINING PROTEIN 27-RELATED 4 264 - -
Apr9g3043 288 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 4 264 - -
Apr9g3043 288 ProSiteProfiles LOB domain profile. 9 110 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g3043 Apr-Chr9 37234145 37235134 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g3043 1 250 AS2 family AT3G47870 40.397 3.67e-53 174
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Apr9g3043 LOB 2.8e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g3043 - - lang:109357116 365.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g3043 9 37234145 37235134 Apr9g3043 9 37234145 37235134 ECH