Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g3018 ATGGTGAATCCTGCTCCTGCGAGCTTCTGTACCCAAGCAAATGCTCTTCTTCGGAAGAATCTAATATTCCAGAAACGGAACGTGAAAACCAACGTTCGGCTAATACTGTTCCCGTTGCTCCTTTGCGTTTTGCTTGTTATCATTCAACGTTTGATCGACGCGCAATTGGACACATCAGAGTTCAAATGCGGCTGCGTTTGTGCAAACGACAGAACGAAAGGTGCACAGTGCGACGATTCCGAGAAGGTTTGTGGGGTCCAGTATTCCGATTCAACTCAAGCCGCCACGTGTCCCATTCCTAACCCACCGGAATGGCCACCGCTGTTACAACTTCCCGCTCCTCTGAACCGCGCCTTGAGAACCGCTTTTATTCCCTTTTCAGATTTGCCCGATGCGTCGTGCCGGAAAACCGGCTTGTGTCCTCTTACTATGCTCTTCACCGCAGACAATCACTCTTTCGCAGAAAGTGTGTCTGCAAATATGTTCCCGAGTGCATTGAGTATGAATGAGTCTGGTAGTGATATCATGGGTAGTTTGGCGATGAATGTTCTGGGATCTGAATCGAGGCCTGGGAGCAACAATTACTTTGAACCTGCCTTTTCTTCGGGTCTTCCCATTTATTATGTACAAAATCAGTGCATGGGGAGTTTTGGACCCTCCTTTTCCTTCCCGGTAGGAGACATGCAGCTAGAGGTCAGATGTGCTCAGGGTTTACGTTTATGGCGTAATAGTTCTTCTGAGATCAATAGTGAGCTGTATAAAGGTTATCTAAGAGGTAACACAGAAGGACAAGCCAATGAGATAGTTTCAGCTTTTGATTTTCTAAATTCAAACAGGAATGGATATAATGTTAGCATATGGTACAACTCAACCTACAAGCGAGACACCAGATATGGCCCTATTGCTTTGACGCGAATTCCTCGCTCTGTAAATCTGCTATCAAATGCGTACCTGCAGTTTCTGCTTGGACCTGGAACCAAAATGCTATTTGAGTTTGTAAAGGAAATGCCAAAGCCTGAGACTCGAATTAGGATTGAGATAGCTTCTCTTCTAGGTGCTCTCTTCTTTACATGGGTCATCCTGCAACTTTTTCCTGTTGTTCTGACATCACTAGTATATGAGAAGCAACAAAAATTAAGAATCATGATGAAAATGCACGGTCTAGGTGATGGGCCATATTGGATGATTTCATATGGTTATTTTCTTGCCATATCAGTGATCTACATGTTGTGTTTCGTAATATTTGGCTCACTCTTAGGATTAAAATTCTTCACATTGAATGACTACAGCATCCAATTTGTGTTTTATTTCATCTATGTAAACTTACAAATTGCACTGGCATTTCTGGCGGCTTCCATATTTTCAAATGTTAAGACTGCTACAGTAACTGCATATATAGGGGTCTTTGGAACTGGGTTATTAGCTGGATTTCTTTTCCAATTCTTTGTTCAAAATACATCATTTCCAAGAGGGTGGATCATTGTTATGGAGTTGTATCCTGGGTTTGCTTTATATCGTGGATTATATGAGTTTGCACAATTTTCCTTTAATGGGAGTACTTTGGGGACTAATGGTATGCAGTGGCAGGATCTGAGCAATAGCACCAATGGCATGAAGGAGGTCTTAATCATCATGTTTGCTGAGTGGATTGTATTGCTTTTTGCGGCCTTTTACATTGATCAAGTATTGTTATCAAGAAGCAGAAAAAGTCCTTTTTTCTTCTTGAAACGATTTCAGAAAAAGCCTCCTTCTTTCCAGAAGCTCAGTAGTGAAAAGCAGGGATCGAAAGTTTTATCTCAGATAGAGAAATCTGATATCATCCAAGAGAAGGAGAAGGTGAAACAACTGCTACTTGAACCAAACATTAATCAGGGTATTGTATGTGATGACCTCAAAAAAGTGTATCCAGGGAGGGATGGAAATCCAGATAAATTTGCAGTGAGAGGGTTGTTCCTTTCCGTGCCTCAAGGGGAATGCTTTGGTATGCTTGGTCCCAATGGGGCTGGGAAGACTTCTTTCATCAGTATGATGATTGGTCTGACAAAGCCAACCTCTGGCGCAGCATTTGTTCAAGGCCTGGACATAAGAACTAATATGGATGGAATATATACTTGCATGGGTGTGTGCCCACAGCATGACTTGCTGTGGGAAAGTTTGACAGGTAGAGAGCACCTACTTTTTTATGGCAGACTAAAAAATCTTAAAGATTCAGCCCTGACACAAGCAGTAGAAGAATCTTTGAAGAGTTTAAACCTTTTTCATGGAGGAGTTGCTGATAAACAAGCTGGAAAATACAGTGGAGGGATGAAGAGGAGGCTTAGTGTTGCAATTTCATTGATTGGGGATCCCAGAGTTGTTTACATGGATGAACCTAGTACCGGGTTAGACCCTGCCTCAAGAAAAAGCTTATGGACTGTTATCAAGCGTGCAAAACAGAGCCGGGCAATCATTCTCACAACACATTCCATGGAAGAAGCAGAGGCCTTATGTGATCGATTAGGAATATTTGTAAATGGTAGCTTGCAGTGCGTAGGAAATCCAAAGGAGCTGAAAGCAAGATATGGAGGAACTTACGTGTTCACAATGACATCATCTTCGGATCATGAAAGAGATGTGGAGAGCCTGGTGCAGCAACTCACCCCAAATGCCAACAAGATATATCATCTCTCTGGGACCCAGAAGTTTGAGCTGCCAAAAGAGGATGTTAGAATAGCCAATGTATTCCAAGCTGTTGACGCTGCAAAGAGAAAATTCACTATTTTTGCATGGGGTTTAGTTGACACCACATTGGAAGATGTCTTCATTAAGGTAGCACGCGAGGCTCGGGCTTTTGACTCCTTGTCATAA 2847 0.4257 MVNPAPASFCTQANALLRKNLIFQKRNVKTNVRLILFPLLLCVLLVIIQRLIDAQLDTSEFKCGCVCANDRTKGAQCDDSEKVCGVQYSDSTQAATCPIPNPPEWPPLLQLPAPLNRALRTAFIPFSDLPDASCRKTGLCPLTMLFTADNHSFAESVSANMFPSALSMNESGSDIMGSLAMNVLGSESRPGSNNYFEPAFSSGLPIYYVQNQCMGSFGPSFSFPVGDMQLEVRCAQGLRLWRNSSSEINSELYKGYLRGNTEGQANEIVSAFDFLNSNRNGYNVSIWYNSTYKRDTRYGPIALTRIPRSVNLLSNAYLQFLLGPGTKMLFEFVKEMPKPETRIRIEIASLLGALFFTWVILQLFPVVLTSLVYEKQQKLRIMMKMHGLGDGPYWMISYGYFLAISVIYMLCFVIFGSLLGLKFFTLNDYSIQFVFYFIYVNLQIALAFLAASIFSNVKTATVTAYIGVFGTGLLAGFLFQFFVQNTSFPRGWIIVMELYPGFALYRGLYEFAQFSFNGSTLGTNGMQWQDLSNSTNGMKEVLIIMFAEWIVLLFAAFYIDQVLLSRSRKSPFFFLKRFQKKPPSFQKLSSEKQGSKVLSQIEKSDIIQEKEKVKQLLLEPNINQGIVCDDLKKVYPGRDGNPDKFAVRGLFLSVPQGECFGMLGPNGAGKTSFISMMIGLTKPTSGAAFVQGLDIRTNMDGIYTCMGVCPQHDLLWESLTGREHLLFYGRLKNLKDSALTQAVEESLKSLNLFHGGVADKQAGKYSGGMKRRLSVAISLIGDPRVVYMDEPSTGLDPASRKSLWTVIKRAKQSRAIILTTHSMEEAEALCDRLGIFVNGSLQCVGNPKELKARYGGTYVFTMTSSSDHERDVESLVQQLTPNANKIYHLSGTQKFELPKEDVRIANVFQAVDAAKRKFTIFAWGLVDTTLEDVFIKVAREARAFDSLS* 949
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g3018 948 Gene3D - 618 891 IPR027417 -
Apr9g3018 948 PANTHER ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA 7 948 IPR026082 GO:0016021|GO:0055085|GO:0140359
Apr9g3018 948 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 626 863 IPR003439 GO:0005524
Apr9g3018 948 SMART AAA_5 656 840 IPR003593 -
Apr9g3018 948 ProSitePatterns ABC transporters family signature. 765 779 IPR017871 GO:0005524
Apr9g3018 948 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 626 859 IPR027417 -
Apr9g3018 948 Pfam ABC transporter 651 792 IPR003439 GO:0005524
Apr9g3018 948 Pfam ABC-2 family transporter protein 347 558 - -
Apr9g3018 948 CDD ABC_subfamily_A 630 851 - -
Apr9g3018 948 PANTHER ABC TRANSPORTER A FAMILY PROTEIN 7 948 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g3018 Apr-Chr9 37023979 37034006 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g3018 618 850 Calmodulin-binding Proteins AT2G36910 25.692 1.65e-14 76.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g3018 - - gmx:100806425 1521.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g3018 9 37023979 37034006 Apr9g3018 9 37023979 37034006 ECH