Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g3011 ATGGGATCAGAAAGTGTAGCTCCAGTGGTTGAGACATCAAAAAACAGGTCTTCTTCTGGTAAAATGAACCAAGGGAAAGTCCCCAAGAGAGTTCACAAGGCTGAAAGGGAGAAAATGAAGCGTGAACATTTGAATGAACTCTTTCTTGATCTGGCCAATGCACTAGATCTAAATGAGCAGAACAATGGAAAGGCTTCTATATTGTGTGAAGCTGCTAGGCTGGTTAAAGACTTACTCTGTCAAATTGAGTCCCTCAAGAAGGAGAATGTTACCCTGTTGTCTGAATCTCGTTATGTGACCATGGAGAAAAATGATCTGAAAGAGGAAAATTGCAGCCTAGAAACTCAAATTGAGAAACTGCAAGGTGAGATACAGGCAAGAGTGGCTCAATCTACACCTGACCTGAACGTACCTCCTCATTTGGAACTTGATCCATTGGAGCAGACAAATTTTCCAGGACACAGTCTCCAGTTGCCCACTGCGGAACCTAACTTGCAGCAAGGATCTGCAGTTTTGGTTGTCCCCTTTCGTCCAGATCTTGAAGCTGCTTTTCAAGCTCCTAATGTCATTGAGCTTACGCCAAAATCTACATCTGTTGTTAGTAAACCACATGCCAGGTATCCCACACCAGCAGATTCATGGCCGTCACAGCTGCTAGGAGAGCAACCAACTTCAAATTAA 681 0.4376 MGSESVAPVVETSKNRSSSGKMNQGKVPKRVHKAEREKMKREHLNELFLDLANALDLNEQNNGKASILCEAARLVKDLLCQIESLKKENVTLLSESRYVTMEKNDLKEENCSLETQIEKLQGEIQARVAQSTPDLNVPPHLELDPLEQTNFPGHSLQLPTAEPNLQQGSAVLVVPFRPDLEAAFQAPNVIELTPKSTSVVSKPHARYPTPADSWPSQLLGEQPTSN* 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g3011 226 MobiDBLite consensus disorder prediction 195 226 - -
Apr9g3011 226 MobiDBLite consensus disorder prediction 1 24 - -
Apr9g3011 226 Coils Coil 75 95 - -
Apr9g3011 226 PANTHER TRANSCRIPTION FACTOR BHLH47 4 225 - -
Apr9g3011 226 PANTHER TRANSCRIPTION FACTOR BHLH47 4 225 - -
Apr9g3011 226 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 28 78 IPR011598 GO:0046983
Apr9g3011 226 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 26 92 IPR036638 GO:0046983
Apr9g3011 226 Coils Coil 103 123 - -
Apr9g3011 226 MobiDBLite consensus disorder prediction 1 34 - -
Apr9g3011 226 Gene3D - 25 102 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g3011 Apr-Chr9 36966044 36968310 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g3011 15 222 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G47640 49.565 5.76e-63 194
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g3011 - - gmx:100782436 362.073
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g3011 9 36966044 36968310 Apr9g3011 9 36966044 36968310 ECH