Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g3002 ATGGGGCACTTGGTCTATTGCTTGGAAGAAAACGGTAAACGTGTGGCACCCATGCATGCATGGTCAGGAAGCGCAATCTTATACACTGAGAGGAATCCTTTTACTACTACTTCTTCACCCAGAACGTTATCAAAGACGACAATATCTAAGTACTTTTATATGCCTATAACACAAGCAGCCAGGGAACTTAACGTGGGCGTGACACTTTTGAAGAAAAGGTGTAGGGAGTTGGGAATTCGAAGGTGGCCCCATAGAAAGTTGATGAGCCTCCAAACTCTGATAAATAATGTACAGGAGCTAGGGAAAGAGGATGGGCATGATAGTGAAGAGAAGTTAAGGAATGCGATTGAGATATTGGAGAAGGAAAAGAAGCTTATGGAGGAAATGCCAGATATTGAACTTGAAGATAATACAAAAAGGCTTAGACAAGCTTGTTTCAAGGCCAACTACAAGAAGAGGAAGCTCAAAGGGCAGAGGGAAACACAAGAGTGTTCTTCTTTCAGTGGCCGTGGTAGAACTATTGACACAAGTTATGATTATGATGAAGCACAAGACATCAAATCTCTATTGCCTGTCCCTCAATTAACATAA 591 0.4179 MGHLVYCLEENGKRVAPMHAWSGSAILYTERNPFTTTSSPRTLSKTTISKYFYMPITQAARELNVGVTLLKKRCRELGIRRWPHRKLMSLQTLINNVQELGKEDGHDSEEKLRNAIEILEKEKKLMEEMPDIELEDNTKRLRQACFKANYKKRKLKGQRETQECSSFSGRGRTIDTSYDYDEAQDIKSLLPVPQLT* 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g3002 196 ProSiteProfiles RWP-RK domain profile. 24 111 IPR003035 -
Apr9g3002 196 PANTHER PROTEIN RKD4 36 166 IPR044607 GO:0003700
Apr9g3002 196 Pfam RWP-RK domain 43 90 IPR003035 -
Apr9g3002 196 PANTHER PROTEIN RKD1-RELATED 36 166 - -
Apr9g3002 196 Coils Coil 109 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g3002 Apr-Chr9 36853146 36856025 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g3002 34 157 AtRKD Transcription Factor Family AT1G18790 70.161 8.76e-60 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Apr9g3002 RWP-RK 4.2e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g3002 - - aprc:113874812 387.497
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g3002 9 36853146 36856025 Apr9g3002 9 36853146 36856025 ECH