Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g2980 ATGGCGCTGTTCAGAAGGTTCTTCTACCGGAAGCCGCCGGATCGGCTTCTGGAGATTTCCGAGAGAGTTTATGTTTTTGATTGTTGCTTCTCCACGGATGTCTTGGAAGAAGATGAGTACAGAGTTTATATGGGGGGAATTGTGGCTCAGCTACAGGACCACTTTCCAGATGCTTCTTTCATGGTATTCAACTTCAGAGAAGGGGAGAGACGCAGCCATATCTCAGACATACTTTCTCAGTATGACATGACAGTTATGGAGTACCCTCGGCAATATGAGGGTTGTCCCCTTCTGCCTTTAGAGATGATCCATCACTTCCTTCGATCAAGTGAAAGCTGGTTGTCTTTGGAGGGGCAACAGAATGTGCTTTTGATGCACTGTGAAAGGGGAGGTTGGCCTGTACTGGCATTTATGCTAGCCGGTCTTCTATTATACCGGAAACAGTACAGTGGGGAGCAGAAGACTCTTGAAATGGTCTACAAGCAAGCTCCCAGAGAACTACTGCACCTTTTATCTCCTGTGAACCCACAGCCTTCTCAGTTCAGATATCTTCAGTATATTTCCAGAAGGCATTTGGGTTCTGAGTGGCCACCATCAGAAACACCCCTATATTTGGATTGTCTGATTCTTAGAGTCCTTCCATTATTTGATGATGGAAAAGGTTGCAGGCCTGTTGTACGCGTTTATGGTCAGGACCCTTCAATTCCTGCCAATAGAAGTTCAAAGCTTCTTTTTTCAACCTCAAAATCTGAAAAGCATGTTCGCCACTACATACAGGCAGAGTGTATGCTCGTGAAAATTGATATCCATTGTCGTGTTCAAGGGGATGTGGTTCTTGAGTGCATACATTTAAGTGAAGATTTTATTCAGGAAGATGTGATGTTTAGAGTAATGTTCCATACTGCATTTGTGCGGTCAAATATTTTGGCACTGAACCGTGATGAAATTGATATTTTGTGGGATGCAAAGGATCAATTTCCCAGGGACTTCAAAGCAGAGGTGCTTTTTTTGGACGCTGATGCTGTTATACCTGATCTAACCACAGTCATGGTGAGTGAAGATGCAAATGAGACTGAAAGTGCCGAGACAGAAAGTGCTACACCTGAGGAATTCTATGAAGTGGAAGAGATTTTCAGCAATGTAATTGATGCACAGGAAGGTAAGACAGACTATGATTCTCATGCTTTTGCTGACAATACAGTGGATGATGAAAATCATAAAGAGGTCTGGAGGGAAGACTTGGATCCTCCTACTTTTCAGGATTGTCCACCAGATGATGGGATTCCCAAGCAGGTTGGCAAGATGGATTCTGGTATTAATGCAGTGAAAGACATCTCTATTGATGATGTGAACTACAAATTCAATGAGAGCATGGATTCAGATCCTCAAGCAGTGAAGGACATTGCTGTGGATGATGGAGAAATTAAGCTAACTTCTGCTACATTTGCTTCTGATATGGTTAAGCCTCCGGAAACAAAGGAAGTCACCATGGATGTGCACCAAGAATCAGCAGTTATGCAAAATGAATATGATGAAAATAAGGAAGCAACAGAAAAGGAATTGGACTCCAAGGCTGGGCAGCCGATGTCTGATTTGTCCAAACAAAAATCTGGTAAACTACTTCCATCTACTGCCAAGAAACAACTTCCATCTAACTCTAAGCCAGTTGGAGACACAATTGCAGCAAAACAAAAGATTAAACAGCCTGAAACCCATGGTTTTCAGGCAAAACAAGCTAAGTCAAATGCAGTAACTAGGTGGATTCCATCTAACAAGGGTTCTTACACAAATTCAATGCATGTCTATTATCCACCATCAAGGAATAATAGTGCACCAGCTGCCCTGTCAAATTTCACCACCCCAAAGGAAAAAATGGAAGATGCCAGAGCAAGATCTTTATCAGCTCCTGTTGTCTCTGCAGCAGCTGTTTCTATTGACAAGGCAAATGACCTAAAAAGTCGTAAGATGGCCACTTCAAAATCTTCTGGCTACCTAGAAGCAGAAATAGATGCGAAATGTGCACCATCACCATTGCCATCAATTGAAGAGACATCTTTTCAGTCAGATAGTCAAGCAGAACAACAGAACTCAGAGCACATGCTACAGCCTCCCCCACCGCCTCCTCCTCCCCCTCCCCCTCCCCCTCCGCCTCCATTTCATAGTAGAAAATCTTCTTCACATGTTTTTGAATCCTTATCATTACAGGAAGATGTATCCGCTCAAGACTCTCCATCTCTATTAGAATCACCATCTTCTTTGGGTGGAAAAGGACCAACACCGCCGCCACCACCACCACCACCATTGCCACCTTCAACTGTAACATCGTTTACTAGACAAAAACCAATTGTAAATTTACAGCATGCAACTTCTCTTCCATCCCCTCCACCTCCACCTCCGCCCCCGTCTCCACCCCCATTTTTTGGGATAAATAAAGGGAGCTTAGTGCCTTCTTCACCCCCTTGGAAGTCTGTGGCTTCATCATTTGTTGCAGAGACCAGTGGATCTTTACTACTTCCTACACCCACACTTCCTTTTACAAGCACTGAAATTACATCAGAAGTTTCTGAAGTGCTTACACCATCACAGACACCACCTCCTCCACCACCACCACCACCACCTCAATTGGCTCCTCCAAGGTATGAAGTTTCATACAGTCCTCCTCTGCCACCATCAACAGCCCCTATAAAGCATGTCATTTCATCAATTCCTCCTCCTCTTTCCCCATTTCCCATAGCTTCAACACATGGGGCTCCACCCCCTCCTCCCCCATTGCCCCAATTTGCATCACATAAAGCTCCACCAGCACCCCTACCTCCGCCTCCCCCTCCCTCCCTACAACCCTTAGCTAATTCACATATTGGTTCACCTACACCACCTGCACCTCCACCCCCACCTCCTTTTGGTAGATCTCCACCACCACCACCCCCACCCCCACCTCCTTCAAGTAAAGCACCGCCCCCACCACCTCCGTTTAGTAAAGCTCCACCTCCGCCACCTCCACCTTCACCTCCACCTCCACCTCCTTTTAGTAAAGCCCCCCCACCACCTCCTGCTCCATTGCATGGAACTCCACCTACACCTACACCTCCCCCAGCACCACCACTTCCTCCATCATGTGGAGCCCTAATTCCACCTCCACCTCCACCAATATCGAGAGCCCCACCTCCTCCAATGGGTGGAGCACCACCACCACCTCCACCTCCACTTCCTCCTCTTCCAATGGGTGGAGCACCACCACCACCTCCTCCTCCTCTAATGGGTGGAGCACCACCTCCTCCACCACTACCTGGTGGTCGAGGACCACCACCACCGCCTCCTCCTCCAATGGGGGGAGCACCACCTCCTCCACCACTATCAGGAGGTCGAGGACCACCACCTCCCCCACCTCCTCCAATGGGTGGAGCACCACCTCCTCCTCCTCCTCCTCATGGTGGTCGAGGACCACCACCTCCACCACCTCCTCCAGTGGGTGGAGCACCACCTCCTCCTCCACCTCCTGGTGGTCGAGGACCACCTCCTCCACCTCCCCCTGGTGTTCCTGGTGCTCCTCCTCCTCCTGGTGGTGCACCTCCACCACCTCCACCTTTAGGTTCCAAAGGAGCAAATGTTGGAGCTGATCCAAGAGGGAGGGGGCGTGGTTATGCACGTCCAGGAGGAGCTGGTGCAATGGCACCCCGGCGATCCTCATTAAAGCCTTTGCATTGGAGTAAGGTTACAAGGGCATTGCAAGGAAGTTTATGGGAAGAATTACAAAGACATGGAGAACCTCAAATTGCACAAGAGTTTGATGTTTCAGAGATAGAGAAGCTTTTCTCTGCAAATGTTCCAAAACCTGCTGATTCAGGTGGAAAATCTGGAGGCCGGCGCAAGTCTGCTGGATCTAAAACTGACAAAGTCCACATGATTGACCTAAGGAGGGCTAATAATACTGAAATTATGCTCACTAAGGTTAAGATGCCACTTCCTGATATGATGGCTGCAGTACTGGCTATGGATGAGTCGGTATTAGATGTTGATCAGGTGGAAAATCTCATTAAGTTTTGTCCTACTAAAGAGGAGATGGAACTTTTGAAGGGATACACCGGTGACAAAGAGAATTTGGGGAAGTGTGAACAGTACTTTTTGGAGCTGATGAAGGTGCCAAGGGTGGAGTCAAAATTAAGAGTGTTCTCTTTCAAGATTCAGTTTGGTTCTCAGGTTACAGAATTTAAGAAGAGTTTAAACACTGTGAACTCTGCCTGTGAAGAGGTTCGTAAATCTGTTAAACTGAAGGAGATCATGAAGAAAATTCTTTATTTGGGTAATACATTGAATCAGGGAACTGCGAGGGGATCTGCAGTTGGATTCAAGTTGGATAGTCTTTTAAAGCTCACTGACACTCGTGCTTCTAACAATAAGATGACACTGATGCATTATCTTTGCAAGGTCCTAGCTGATAAGTCGCCTGGACTCCTTGATTTTCACCTTGACCTTGTTAGCCTCGAAGGTGCAACTAAGATACAATTGAAGTCATTAGCAGAAGAGATGCAGGCAATCATCAAGGGATTAGAAAAGGTTAAACAAGAACTTGCTGCCTCTGAAACTGATGGACCTGTATCTGAAGTTTTCCGTAAGACATTGAAAGAATTTATAACTGTAGCTGAGTCAGAGGTGGCATCTCTAACAAATCTATATTCTGTAGTGGGTAGAAATGCTGATGCACTTGCACTATATTTTGGTGAGGATCCTGCTCGTTGCCCATTTGAGCAAGTTACTGCAACTCTCTTAAATTTTATAAGGTTGTTTCGGAAAGCACATGAAGAGAATCACAAACAAGCAGAGTTAGAGAAGAAGAAAGCTGAGAAAGAGGCTGAAATGGAGAAGGCTAAGGGCGTTAACTTGACAAGAAAGAGTGCAAAAGATAGTTGA 4908 0.4637 MALFRRFFYRKPPDRLLEISERVYVFDCCFSTDVLEEDEYRVYMGGIVAQLQDHFPDASFMVFNFREGERRSHISDILSQYDMTVMEYPRQYEGCPLLPLEMIHHFLRSSESWLSLEGQQNVLLMHCERGGWPVLAFMLAGLLLYRKQYSGEQKTLEMVYKQAPRELLHLLSPVNPQPSQFRYLQYISRRHLGSEWPPSETPLYLDCLILRVLPLFDDGKGCRPVVRVYGQDPSIPANRSSKLLFSTSKSEKHVRHYIQAECMLVKIDIHCRVQGDVVLECIHLSEDFIQEDVMFRVMFHTAFVRSNILALNRDEIDILWDAKDQFPRDFKAEVLFLDADAVIPDLTTVMVSEDANETESAETESATPEEFYEVEEIFSNVIDAQEGKTDYDSHAFADNTVDDENHKEVWREDLDPPTFQDCPPDDGIPKQVGKMDSGINAVKDISIDDVNYKFNESMDSDPQAVKDIAVDDGEIKLTSATFASDMVKPPETKEVTMDVHQESAVMQNEYDENKEATEKELDSKAGQPMSDLSKQKSGKLLPSTAKKQLPSNSKPVGDTIAAKQKIKQPETHGFQAKQAKSNAVTRWIPSNKGSYTNSMHVYYPPSRNNSAPAALSNFTTPKEKMEDARARSLSAPVVSAAAVSIDKANDLKSRKMATSKSSGYLEAEIDAKCAPSPLPSIEETSFQSDSQAEQQNSEHMLQPPPPPPPPPPPPPPPPFHSRKSSSHVFESLSLQEDVSAQDSPSLLESPSSLGGKGPTPPPPPPPPLPPSTVTSFTRQKPIVNLQHATSLPSPPPPPPPPSPPPFFGINKGSLVPSSPPWKSVASSFVAETSGSLLLPTPTLPFTSTEITSEVSEVLTPSQTPPPPPPPPPPQLAPPRYEVSYSPPLPPSTAPIKHVISSIPPPLSPFPIASTHGAPPPPPPLPQFASHKAPPAPLPPPPPPSLQPLANSHIGSPTPPAPPPPPPFGRSPPPPPPPPPPSSKAPPPPPPFSKAPPPPPPPSPPPPPPFSKAPPPPPAPLHGTPPTPTPPPAPPLPPSCGALIPPPPPPISRAPPPPMGGAPPPPPPPLPPLPMGGAPPPPPPPLMGGAPPPPPLPGGRGPPPPPPPPMGGAPPPPPLSGGRGPPPPPPPPMGGAPPPPPPPHGGRGPPPPPPPPVGGAPPPPPPPGGRGPPPPPPPGVPGAPPPPGGAPPPPPPLGSKGANVGADPRGRGRGYARPGGAGAMAPRRSSLKPLHWSKVTRALQGSLWEELQRHGEPQIAQEFDVSEIEKLFSANVPKPADSGGKSGGRRKSAGSKTDKVHMIDLRRANNTEIMLTKVKMPLPDMMAAVLAMDESVLDVDQVENLIKFCPTKEEMELLKGYTGDKENLGKCEQYFLELMKVPRVESKLRVFSFKIQFGSQVTEFKKSLNTVNSACEEVRKSVKLKEIMKKILYLGNTLNQGTARGSAVGFKLDSLLKLTDTRASNNKMTLMHYLCKVLADKSPGLLDFHLDLVSLEGATKIQLKSLAEEMQAIIKGLEKVKQELAASETDGPVSEVFRKTLKEFITVAESEVASLTNLYSVVGRNADALALYFGEDPARCPFEQVTATLLNFIRLFRKAHEENHKQAELEKKKAEKEAEMEKAKGVNLTRKSAKDS* 1636
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g2980 1635 MobiDBLite consensus disorder prediction 505 525 - -
Apr9g2980 1635 SUPERFAMILY Formin homology 2 domain (FH2 domain) 1297 1623 - -
Apr9g2980 1635 MobiDBLite consensus disorder prediction 901 947 - -
Apr9g2980 1635 MobiDBLite consensus disorder prediction 860 893 - -
Apr9g2980 1635 SMART PTEN_C2_2 198 338 IPR014020 -
Apr9g2980 1635 ProSiteProfiles Formin homology-2 (FH2) domain profile. 1220 1621 IPR015425 -
Apr9g2980 1635 MobiDBLite consensus disorder prediction 724 752 - -
Apr9g2980 1635 Gene3D Formin, FH2 domain 1222 1607 IPR042201 -
Apr9g2980 1635 Coils Coil 1502 1526 - -
Apr9g2980 1635 MobiDBLite consensus disorder prediction 528 556 - -
Apr9g2980 1635 PANTHER FORMIN-J 1 1013 - -
Apr9g2980 1635 PANTHER FORMIN-J 1025 1626 - -
Apr9g2980 1635 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 200 336 IPR035892 -
Apr9g2980 1635 MobiDBLite consensus disorder prediction 505 556 - -
Apr9g2980 1635 MobiDBLite consensus disorder prediction 1273 1297 - -
Apr9g2980 1635 CDD PTP_PTEN-like 16 190 - -
Apr9g2980 1635 Pfam C2 domain of PTEN tumour-suppressor protein 199 336 IPR014020 -
Apr9g2980 1635 MobiDBLite consensus disorder prediction 954 1198 - -
Apr9g2980 1635 MobiDBLite consensus disorder prediction 773 789 - -
Apr9g2980 1635 Pfam Formin Homology 2 Domain 1226 1595 IPR015425 -
Apr9g2980 1635 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 13 188 IPR029021 -
Apr9g2980 1635 MobiDBLite consensus disorder prediction 1603 1635 - -
Apr9g2980 1635 Coils Coil 1596 1630 - -
Apr9g2980 1635 MobiDBLite consensus disorder prediction 680 699 - -
Apr9g2980 1635 MobiDBLite consensus disorder prediction 790 807 - -
Apr9g2980 1635 MobiDBLite consensus disorder prediction 816 859 - -
Apr9g2980 1635 MobiDBLite consensus disorder prediction 700 721 - -
Apr9g2980 1635 Gene3D Protein tyrosine phosphatase superfamily 14 204 IPR029021 -
Apr9g2980 1635 Gene3D - 205 336 - -
Apr9g2980 1635 SMART it6_source 755 1635 IPR015425 -
Apr9g2980 1635 ProSiteProfiles C2 tensin-type domain profile. 200 339 IPR014020 -
Apr9g2980 1635 MobiDBLite consensus disorder prediction 675 1228 - -
Apr9g2980 1635 MobiDBLite consensus disorder prediction 755 772 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g2980 Apr-Chr9 36704831 36722236 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g2980 1196 1635 FH2 protein (formin) Gene Family AT5G07740 81.448 0.0 726
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g2980 - - gmx:100785475 1310.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g2980 9 36704831 36722236 Apr9g2980 9 36704831 36722236 ECH