Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g2975 ATGTCAGAGCAGGAAACACATTCCTGTGGCTTACTATTACTCTTTTTCTTGATCCTTCTTTCAGGTAAAGTTGTTGTAGGTGACTCTTTGGACACAGATAAAGAGGTTCTGCTGAAGCTGAAAGGGTACCTGGACAACAAAACCTTTGCAGACACAGGATGGTACGTGTATTGGAACATCCATGGCTCCACTAACCCTTGTGAATGGAGAGGAATCTCGTGCAGTGGCACAAGGAGGGTGGTTGGCATAGACCTCTCTAACAGTGACATCACGGGTGAGATATTCAAGAACTTCTCGCAGCTCACTGAGCTCACATACCTTGATCTCTCTCAGAACACACTCTTTGGTGAGATTCCTGAGGAATTGAGGAACTGCCACAAGCTGGTGCATCTCAATCTCTCCCACAATATTCTTTCTGGTGTGCTGAATTTGACTGGATTGAGAAGCTTGCAAACGCTGGACTTGTCAAATAACAGATTTTATGGGGAGATTGGGTTGAATTTCCCTGCCATTTGTGACAATTTGGTCACTTTGAATATCTCAGGCAATAACTTAACTGGCAGGATTGATAACTGCTTTGATCAATGTCTCAAGTTGCAGTACTTGGATTTGAGTACCAACAAGCTCAGTGGGAGTATGTGGATGGAATTTGCAAGGCTCAGAGAGTTTTCTGTTGCGGAGAATCATCTCACTGGGACCATTCCTTTGGAAGCTTTTCCCGGGAATTGTAGTCTTGAAGAACTAGACCTTTCACAAAATGGATTTGTTGGTGAGGCACCTAAGGGGGTTTCTAATTGCAAGAATTTAAGTAGTCTGAATCTTTCTAGTAACAACTTTACTGGGGTTATTCCAGTTGAAATAGGATCCATTTTAGGCCTCAAAGCATTGTACTTGGGGAACAACAGCTTTTCAAGAGAGATTCCTGAGGCCCTTCTGAACTTGACCAATTTGGTTTTCTTGGATTTGAGCAGAAACCGGTTTGGTGGGGAAGTACAAAAGATATTTGGGAAATTTAAGCAAGTGAGTTTTCTTCTGTTGCACTCAAATCATTACAATCGAGGATTGAGTTCCTCAGGAATTCTTACATTGCCCAACATTTGGCGGTTAGACCTTAGCTACAATAACTTTTCAGGTCCATTACCAGTTGAAATCTCTCAAATGTCAAGCCTTAAGTTTCTCATGTTATCCTACAACCAATTCAATGGATCCATTCCACCCGAATTCGGAAACATGACTCACCTACAAGCACTGGACCTTGCCTTTAACAATTTGAGTGGGCCAATACCACCAAGCCTTGGAAACTTGAGTTCCCTATTATGGTTGATGCTCGCAGACAATTATTTAACAGGAGAAATCCCTCCAGAGCTGGGAAACTGCACAAGTTTGTTATGGTTAAACCTTGCCAACAATAAGATCTCTGGAACCTTGCCTTCTGAACTGTCCAAAATTGGAAGGAATGCCATGACCACATTTGAATCAAATAGGCAAAACTATAGAATGATTGCTGGCTCTGGTGAATGTTTAGCAATGAAGAGATGGATTCCTGCAGATTACCCTCCATTCAGCTTTGTGTATAGCATCTTAACAAGGAAAAATTGTAGAGGCCTTTGGGACAGATTGCTCAAAGGGTATGGTATTTTCCCATTTTGTACGCCTGGTTCTTCCCTTCGCACACCCCAGATATCTGGTTATATTCAGATAAGTTCAAACCAGCTCAATGGGGAAATCCCTTCAGAGATTGGGACAATGGTGAACTTCAGCATGTTGCATTTGGGTTTCAACAACTTCTCTGGCAAATTCCCACCAGAGATGGGAAGCATTCCGCTTGTGGTCTTGAACATGACAGGAAACAAGTTTTCAGGTGAAATTCCTCAGGAAATTGGTAACATGAAATGCTTGATGAACCTGGACTTGTCTTACAACAATTTCTCTGGGACGTTTCCCATTAGTTTGAACAACTTGGCAGAGCTTAACAAGTTCAACATCTCATATAACCCCTTAATATCCGGTGTAATCCCATCAACCGGACAATTTGTTACTTTTGAGAAAGATTCATATTTAGGAGACCCACTCTTGATCCTTCCCAAGTTCATTGATAACACTACCAACGGTAAAAACGTAACCTTTGAGAAAGACCATCAAAAGGCCACAAAATTATCTGTGTTTTTGGTGTTTCTAGTTATAACACTGGTTTTCATGGTATTTGGGCTTCTCTCTATCATAGTCTGTGTATTGGTGAAAAGCCCATCAGAAGAACCGCGATACCTCTTGAGGGATACAAAAGAGTGGAATGATTCCAGCAGCTCCGGATCCTCACCTTGGTTGTCTGATACAATTAAGGTTATCCGTTTGAACAAGACAGCTTTCACACATGCTGACATTTTGAGAGCAACTAGCAGCTTCTCAGAGGACAGAATTATAGGAAAAGGTGGGTTTGGAACAGTGTACAAGGGTGTGTTTTCAGATGGCAGACAGGTAGCAGTGAAGAAGCTCCAAAGGGAAGGACTTGAGGGTGAAAAGGAATTCAAGGCTGAAATGGAGGTTCTGAGTGGTCATGGGTTTGGTTGGCCTCATCCAAACCTGGTCACACTCTATGGTTGGTGCCTAAATGGTTCAGAGAAGATACTGATTTATGAGTACATAGAAGGTGGAAGCTTGGAGGATCTAGTGACTGATAGAACACGTTTGACGTGGAGAAGGAGGTTAGAAGTGGCAATTGATGTGGCACGTGCATTGGTGTATTTACACCACGAGTGCTACCCTCCTATAGTGCATAGAGATGTGAAGGCTAGTAATGTGCTGCTAGACAAGGATGGGAAGGCCAAGGTTACAGATTTTGGGCTTGCAAGAGTGGTTGATGTTGGTGATAGCCATGTGAGTACTATGGTGGCTGGTACAGTGGGCTATGTTGCACCTGAATATGGACACACATGGCAAGCTACTACAAAAGGAGATGTGTATAGTTTTGGGGTATTGGTTATGGAGTTGGCTACAGGGAGAAGAGCAGTGGATGGAGGGGAAGAGTGTTTGGTGGAATGGGCTAGGCGTGTTATGGGTTATGGAAGACATCATGGGTTGAGCCGTTCTGTGCCAGTTTTGCTATTGGGTTCTGGGCTAGTTGGTGGGGCAGAGGAGATGGGTGAATTGCTAAGGATTGGGGTGAAGTGCACTGCTGAGGCACCTCAAGCTAGGCCTAACATGAAGGAGGTTCTTGCTATGCTCATTAAGATATACAATCCCAAGGGAGACTCCAGTTATGTACACTTTGTTTAG 3273 0.4326 MSEQETHSCGLLLLFFLILLSGKVVVGDSLDTDKEVLLKLKGYLDNKTFADTGWYVYWNIHGSTNPCEWRGISCSGTRRVVGIDLSNSDITGEIFKNFSQLTELTYLDLSQNTLFGEIPEELRNCHKLVHLNLSHNILSGVLNLTGLRSLQTLDLSNNRFYGEIGLNFPAICDNLVTLNISGNNLTGRIDNCFDQCLKLQYLDLSTNKLSGSMWMEFARLREFSVAENHLTGTIPLEAFPGNCSLEELDLSQNGFVGEAPKGVSNCKNLSSLNLSSNNFTGVIPVEIGSILGLKALYLGNNSFSREIPEALLNLTNLVFLDLSRNRFGGEVQKIFGKFKQVSFLLLHSNHYNRGLSSSGILTLPNIWRLDLSYNNFSGPLPVEISQMSSLKFLMLSYNQFNGSIPPEFGNMTHLQALDLAFNNLSGPIPPSLGNLSSLLWLMLADNYLTGEIPPELGNCTSLLWLNLANNKISGTLPSELSKIGRNAMTTFESNRQNYRMIAGSGECLAMKRWIPADYPPFSFVYSILTRKNCRGLWDRLLKGYGIFPFCTPGSSLRTPQISGYIQISSNQLNGEIPSEIGTMVNFSMLHLGFNNFSGKFPPEMGSIPLVVLNMTGNKFSGEIPQEIGNMKCLMNLDLSYNNFSGTFPISLNNLAELNKFNISYNPLISGVIPSTGQFVTFEKDSYLGDPLLILPKFIDNTTNGKNVTFEKDHQKATKLSVFLVFLVITLVFMVFGLLSIIVCVLVKSPSEEPRYLLRDTKEWNDSSSSGSSPWLSDTIKVIRLNKTAFTHADILRATSSFSEDRIIGKGGFGTVYKGVFSDGRQVAVKKLQREGLEGEKEFKAEMEVLSGHGFGWPHPNLVTLYGWCLNGSEKILIYEYIEGGSLEDLVTDRTRLTWRRRLEVAIDVARALVYLHHECYPPIVHRDVKASNVLLDKDGKAKVTDFGLARVVDVGDSHVSTMVAGTVGYVAPEYGHTWQATTKGDVYSFGVLVMELATGRRAVDGGEECLVEWARRVMGYGRHHGLSRSVPVLLLGSGLVGGAEEMGELLRIGVKCTAEAPQARPNMKEVLAMLIKIYNPKGDSSYVHFV* 1091
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g2975 1090 Gene3D Ribonuclease Inhibitor 239 340 IPR032675 -
Apr9g2975 1090 SUPERFAMILY Protein kinase-like (PK-like) 783 1075 IPR011009 -
Apr9g2975 1090 Pfam Protein kinase domain 802 1005 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr9g2975 1090 Gene3D Ribonuclease Inhibitor 410 505 IPR032675 -
Apr9g2975 1090 Gene3D Transferase(Phosphotransferase) domain 1 881 1086 - -
Apr9g2975 1090 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 2 1081 - -
Apr9g2975 1090 Gene3D Ribonuclease Inhibitor 145 238 IPR032675 -
Apr9g2975 1090 Pfam Leucine rich repeat N-terminal domain 31 75 IPR013210 -
Apr9g2975 1090 SUPERFAMILY L domain-like 217 479 - -
Apr9g2975 1090 ProSiteProfiles Protein kinase domain profile. 801 1087 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr9g2975 1090 SMART serkin_6 801 1076 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr9g2975 1090 SMART LRR_typ_2 435 459 IPR003591 -
Apr9g2975 1090 SMART LRR_typ_2 147 174 IPR003591 -
Apr9g2975 1090 SMART LRR_typ_2 314 337 IPR003591 -
Apr9g2975 1090 SMART LRR_typ_2 101 125 IPR003591 -
Apr9g2975 1090 SMART LRR_typ_2 217 241 IPR003591 -
Apr9g2975 1090 SMART LRR_typ_2 411 434 IPR003591 -
Apr9g2975 1090 SMART LRR_typ_2 387 410 IPR003591 -
Apr9g2975 1090 ProSitePatterns Protein kinases ATP-binding region signature. 807 830 IPR017441 GO:0005524
Apr9g2975 1090 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 2 1081 - -
Apr9g2975 1090 Gene3D Ribonuclease Inhibitor 554 707 IPR032675 -
Apr9g2975 1090 Gene3D Phosphorylase Kinase; domain 1 767 880 - -
Apr9g2975 1090 SUPERFAMILY RNI-like 80 288 - -
Apr9g2975 1090 CDD STKc_IRAK 807 1077 - -
Apr9g2975 1090 Pfam Leucine Rich repeat 411 426 IPR001611 GO:0005515
Apr9g2975 1090 SUPERFAMILY L domain-like 564 677 - -
Apr9g2975 1090 ProSiteProfiles Leucine-rich repeat profile. 127 148 IPR001611 GO:0005515
Apr9g2975 1090 Pfam Leucine rich repeat 268 327 IPR001611 GO:0005515
Apr9g2975 1090 Pfam Leucine rich repeat 148 209 IPR001611 GO:0005515
Apr9g2975 1090 Gene3D Ribonuclease Inhibitor 31 144 IPR032675 -
Apr9g2975 1090 Gene3D Ribonuclease Inhibitor 341 409 IPR032675 -
Apr9g2975 1090 ProSitePatterns Serine/Threonine protein kinases active-site signature. 923 935 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g2975 Apr-Chr9 36641009 36644792 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g2975 11 1074 Receptor kinase-like Gene Family AT1G55610 32.034 6.28e-152 481
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-2 Apr9g2975 Pkinase 6.7e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g2975 - - gmx:100816573 1829.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g2975 9 36641009 36644792 Apr9g2975 9 36641009 36644792 ECH