Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g2961 ATGTCTCTCCAGCTAATTGGCTTTGCTACTATTGTAGCAGGTATCCTTATTTACAAGCTCTTTAAGAAGCCAACAAAAAGTGGGCCTTCATTACCTCTGCCACCGGGGCCACGGCCATGGCCCATTGTGGGAAACTTGCCCCACATGGGCCGTGCACCACATCGCGCCCTCACGGCCTTGGCTCGCACCTATGGGCCTCTCATGCACCTTCGCTTGGGTGTTGTTGACGTGGTGGTGGCGGCTTCCGCTTCCGTCGCGGAGCAGTTCTTGAAGGTTCACGACGACAACTTCTCGAGCCGGCCATTGAACTCGGCCGTTAAATACTTGACCTATAACAACCACGACCTTGCTTTTGCTACCTACGGTGCACGGTGGCGCTTGCTCCGGAAAATAAGCTCCGTTCATATGCTCTCTGCCACCGCCGTGGATGATTTTAGACATCTGCGAGAGGAAGAGGTGGCAAGATTGGCATGCAATCTAGCAAGCTCAGGCTCTAAAGCAATGAAGTTGGGACAACTACTGAATGTTTGCATCACTAACACGTTGTTGGAGATAACGACGGGGCGACGAATTTTCAACTATAGCAATGGTGATTATGATCCGAAGGCAGTTGAGTTTAAGTCTATGGTGCTTCATATTATGGTATTGCTTGGAGCTGTCAACATCGGTGACTTCATTCCTGCCTTGAATTGTCTAGACCTCCAAGGAGTGCAAGCCAAGGCCAAGAAATTACACGAAAGGCTTGATGTATTTTTAACTCGTATTATTCAGGAACACAAGATTCTCAAGAGCCAGAAACACCGTGACTTGTTGAGTACATTGCTATTACTTAAAGAGGCTCCTGAGGATGGAGATAAACTCACTGATATAGAGATCAAAGCATTACTTTCGAACATATTTGTGGCTGGGGCAGACACATCAACGAGCACCGTAGAGTGGGCAATTGCTGAATTGATCAAGAACCCAAGAATTATGATTCGTCTCCAACAAGAGTTAGACAATGTTGTGGGACAAGATAGGCTTGTGAGTGAATTGGATTTGCCCCATCTTCCTTACTTGGAGGCTGTGGTGAAGGAAACATTTCGTCTTCACCCACCAACCCCTCTTTCCCTCCCACGAGTTGCGGCTGAGAGCTGTGAAATCTTTGGGTACCACATCCCAAAAGGTGCAACTCTTTTGGTCAATATTTGGGCTATAGGACGTGACCCCAATGAATGGCATGACCCATTAAAGTTCATGCCTGAAAGGTTCCTCTCCGGTGGGAAAAAGGCTAATGTTAATATTAATGGCAATGACTTTGAGGTTATACCCTTTGGTAGTGGGCGTAGAATATGTGCTGGTATGAACTTGGGCCAGAGGTTGGTTCAGTTGCTCGTTGGTACCTTGGCCCACGCATTTAATTACGAGATGGAGAATGGACTTAAGCCAGATACCCTTAACATGGATGAAACTTACAGGTTCACCCTCCAAAGAACAGAGCCTCTTTCGGTACACCCTCACCCTAGGCTTTCACCAAACGTGTTCTCATCATCTTCCTGA 1539 0.4743 MSLQLIGFATIVAGILIYKLFKKPTKSGPSLPLPPGPRPWPIVGNLPHMGRAPHRALTALARTYGPLMHLRLGVVDVVVAASASVAEQFLKVHDDNFSSRPLNSAVKYLTYNNHDLAFATYGARWRLLRKISSVHMLSATAVDDFRHLREEEVARLACNLASSGSKAMKLGQLLNVCITNTLLEITTGRRIFNYSNGDYDPKAVEFKSMVLHIMVLLGAVNIGDFIPALNCLDLQGVQAKAKKLHERLDVFLTRIIQEHKILKSQKHRDLLSTLLLLKEAPEDGDKLTDIEIKALLSNIFVAGADTSTSTVEWAIAELIKNPRIMIRLQQELDNVVGQDRLVSELDLPHLPYLEAVVKETFRLHPPTPLSLPRVAAESCEIFGYHIPKGATLLVNIWAIGRDPNEWHDPLKFMPERFLSGGKKANVNINGNDFEVIPFGSGRRICAGMNLGQRLVQLLVGTLAHAFNYEMENGLKPDTLNMDETYRFTLQRTEPLSVHPHPRLSPNVFSSSS* 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g2961 512 PANTHER FLAVONOID 3'-MONOOXYGENASE 8 500 - -
Apr9g2961 512 Pfam Cytochrome P450 34 479 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr9g2961 512 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 438 447 IPR017972 GO:0005506|GO:0016705
Apr9g2961 512 PRINTS P450 superfamily signature 302 319 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr9g2961 512 PRINTS P450 superfamily signature 355 366 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr9g2961 512 PRINTS P450 superfamily signature 436 445 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr9g2961 512 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 8 500 - -
Apr9g2961 512 PRINTS E-class P450 group I signature 61 80 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr9g2961 512 PRINTS E-class P450 group I signature 85 106 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr9g2961 512 PRINTS E-class P450 group I signature 291 308 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr9g2961 512 PRINTS E-class P450 group I signature 311 337 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr9g2961 512 PRINTS E-class P450 group I signature 354 372 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr9g2961 512 PRINTS E-class P450 group I signature 395 419 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr9g2961 512 PRINTS E-class P450 group I signature 435 445 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr9g2961 512 PRINTS E-class P450 group I signature 445 468 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr9g2961 512 SUPERFAMILY Cytochrome P450 34 502 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr9g2961 512 Gene3D Cytochrome P450 28 506 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g2961 Apr-Chr9 36479025 36481110 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g2961 15 512 Cytochrome P450 AT5G07990 59.880 0.0 630
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g2961 K05280 - gmx:100807293 692.575
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g2961 9 36479025 36481110 Apr9g2961 9 36479025 36481110 ECH