Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g2960 ATGTCTCCTTGGGTTATAGGCTTAGCTAACATCATAATAGCTATCCTTATTTACAAGCTTTTGAGGCTCCTAACTGGGCCTTCGTTACCTCTGCCACCAGGCCCGCGGCCATGGCCCATCGTGGGAAACTTGCCTCACATGGGCCGTGCGCCACATAGTGCCCTAGCAGCCTTGGCTCGTACCCACGGGCCTCTTATGCACTTACGGTTGGGTTTTATCGACGTGGTGGTGGCGGCGTCGGCATCCGTGGCGGAACAGTTCTTGAAGGTTAATGACACGAATTTCTTGAGCCGGCCAATAACCACTACCATTAAATGCTTGAGCTATAACAACCAAGACCTTGCTTTTGCTCCCTACGGTCCACGGTGGCGCGCGCTTCGGAAAATTTTCGGCCTTCACATGCTCTCTGGCAAGGCCGTGGATGATAATAGACATCTACGACAGGAAGAAGTAGCAAGATTGATACGGAATATAGCAAGTTCAGACTCTAAACCAGTGAACCTGGGACAATTGCTAAATATTTGCACCACCAACGCATTGTCGAGGGTGATGATGGGACTACGAGTTTTCAACGATGGCATTGGTGATTGTGATCCCAGGGCAGCTGAGTTTAAGTCTATGGTGCTTGATCTTATGGCGTTGCTTGGAGTTTTTAATATCGGTGACTTTATTCCTGCCTTAAATTGGTTGGACCTTCAAGGAGTGAAAGTTATGGCCAAGGATGTACATAAGAGGTTTGATACATTTTTAACGACCATTCTTGAGGAACATGAGAATTTGAAGACCGACAAACCCCAGGACTTGTTGAGTACGTTGCTATCACTTAAAGAGGCTCCCGAGGATGGAGATAAACTCACTGATGCAGAGATCAAAGCCGTTCTTTCGAACATGTTTGGGGCTGGGACAGACACATCATCAAGCACAGTAGAGTGGGCAGTTGCTGAACTGATCAAGAACCCAAGAATTATGACTCGTCTCCAACAAGAGTTAGACAATGTTGTAGGCAAAGATAGGCTTGTGGCTGAACAGGACTTGCCCCACCTTCCGTACTTGGAGGCTATGGTGAAGGAAACACTTCGTCTTCACCCACCAACCCCTCTTTCCCTCCCACGAATTGCGGCAGAGAATTGTGAGATCTTTGGGTACCACATCCCCAAAGGTGCAACTCTTTTGGTAAATATTTGGGCCATAGCACGTGACCCTAAGGAATGGTCTAACCCGTTGAAGTTCCAACCTGAAAGATTCCTCCCCGATGGTGAGAAGGCTAATGTTGATGTTAGGGGCACAAACTTTGAGGTTATACCCTTTAGTGCTGGTCGTAGGACATGTGTTGGTATGACCTTGGGCTTGAAGATGGTTCAGTTACTCGTTGCTACCTTGGCTCATGCTTTTGATTGGGAATTGGAGAATGGACTTAAACCAGAAGAACTTAACATGGATGAACAATATGGGATCACCCTGCAAAGAGCAATTCCTCTCTCAGTCCACCCTCGCCCTAGGCTCTCACCACACGTGTACGAATCCTTTTAA 1530 0.4758 MSPWVIGLANIIIAILIYKLLRLLTGPSLPLPPGPRPWPIVGNLPHMGRAPHSALAALARTHGPLMHLRLGFIDVVVAASASVAEQFLKVNDTNFLSRPITTTIKCLSYNNQDLAFAPYGPRWRALRKIFGLHMLSGKAVDDNRHLRQEEVARLIRNIASSDSKPVNLGQLLNICTTNALSRVMMGLRVFNDGIGDCDPRAAEFKSMVLDLMALLGVFNIGDFIPALNWLDLQGVKVMAKDVHKRFDTFLTTILEEHENLKTDKPQDLLSTLLSLKEAPEDGDKLTDAEIKAVLSNMFGAGTDTSSSTVEWAVAELIKNPRIMTRLQQELDNVVGKDRLVAEQDLPHLPYLEAMVKETLRLHPPTPLSLPRIAAENCEIFGYHIPKGATLLVNIWAIARDPKEWSNPLKFQPERFLPDGEKANVDVRGTNFEVIPFSAGRRTCVGMTLGLKMVQLLVATLAHAFDWELENGLKPEELNMDEQYGITLQRAIPLSVHPRPRLSPHVYESF* 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g2960 509 PRINTS E-class P450 group I signature 59 78 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr9g2960 509 PRINTS E-class P450 group I signature 83 104 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr9g2960 509 PRINTS E-class P450 group I signature 175 193 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr9g2960 509 PRINTS E-class P450 group I signature 289 306 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr9g2960 509 PRINTS E-class P450 group I signature 309 335 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr9g2960 509 PRINTS E-class P450 group I signature 352 370 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr9g2960 509 PRINTS E-class P450 group I signature 393 417 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr9g2960 509 PRINTS E-class P450 group I signature 433 443 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr9g2960 509 PRINTS E-class P450 group I signature 443 466 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr9g2960 509 Gene3D Cytochrome P450 27 504 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr9g2960 509 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 436 445 IPR017972 GO:0005506|GO:0016705
Apr9g2960 509 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 6 498 - -
Apr9g2960 509 Pfam Cytochrome P450 32 479 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr9g2960 509 PANTHER FLAVONOID 3'-MONOOXYGENASE 6 498 - -
Apr9g2960 509 SUPERFAMILY Cytochrome P450 32 500 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr9g2960 509 PRINTS P450 superfamily signature 300 317 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr9g2960 509 PRINTS P450 superfamily signature 353 364 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr9g2960 509 PRINTS P450 superfamily signature 434 443 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr9g2960 509 PRINTS P450 superfamily signature 443 454 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g2960 Apr-Chr9 36460452 36463734 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g2960 10 506 Cytochrome P450 AT5G07990 60.990 0.0 649
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g2960 K05280 - gmx:547475 718.383
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g1605 3 31359578 31362300 Apr9g2960 9 36460452 36463734 PCT