Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g2926 ATGGAGCTTCCTCAGGCGCGTCCATTTGGAACAGAAGGAAGGAAACCGACGCATGACTTTCTGTCACTCTACAGTAATTCAACTGCCCAACAAGATCCAAGGCCATCTTCTCAAGGAAGTTACCTCAAGACTCATGATTTCTTGCAGCCACTAGAACGGCAAGAAACAAAAGCCAGTGCTAAGGAAGAAGCCACAGATGAAATATCATCAGTGGCGCAAAAGCCACCATCTTCAGCACCACCACCTTCAGTTGAGCACCTCTTACCCGGAGGAATTGGGACATACAGTATTAGCCACATTTCATGTTTTAACAATAATAATCAAAGGGTTCCAAAGCCAGAGGCAGCCCTTTACACTGTGCGTCAAGCAACTACCAGTACGGATAGGAATGATGACAACTCCAACTGCAGTTCATATACTTCAAGTGGTTTCACTTTGTGGGAAGAGTCATCGGTAAAGAGGGGAAAGACAGGAAAGGAAAATAACGTGGGCGAGAAACCCACTTTGGGAGGGACAGAGTCTTCGGCGAAGCTAGGGCAGTGGACACTAACGGAACGAACATCACAGTCGTTTCCCAACAATCGTCACAGTAGCTTTAGCTCTCGTTCTTCATCTCAGACAAATGGGCAGAAGAACCAGAGTTTTATTGAAATGATGAAATCTGCAAAGGATAGTGCGCAGGATGAAGTGCTAGAAAACGAAGAAACATTTTTTCTTAAGAAAGAACCGTCGAACACACAAAGAGCCGAACTGAGGGTGAAAGTGGATGGGAAAAGTACTGATCAAAAGCCCAACACACCAAGATCAAAACATTCTGCAACAGAACAGCGGAGAAGAAGCAAAATTAACGACAGATTCCAAACTCTACGAGAGCTTATTCCACACAGCGACCAAAAGAGAGACAAGGCATCTTTTTTGTTAGAGGTCATTGAGTACATTCATTTTTTACAAGAGAAGGTGCATAAGTATGAAGGTTCATTACAAGGGTGGAGTAACGAGCCAGAAAAATTGATGGCATGGCAGAGAAATAATGACAAGCCAGCAGCTGAAAGTTTTCAACCTCGTGGGACAGATAGCGGGTCATGTCCATCTCCAACACTGCTATTTGCTTCAAAAGTTGACGAGAAAAATATCACCATCACCCAAACAATACCTAGGGGTACCCAGAATTTAGAATCTGGCTTTAACACAGCCACTACCTCCAAGACAATGGATCATCAGGCTGGAACAATGAACAAGGCTTTTCCAATTCCTATTTCTTCACAGCTAAATTTCTTCACTCCCACCCAAATCGGTGGTCCAGTTGGAATAGTGTCTCAGCTGGCACATAGATCGGCATCTGATGCAGAGAACACCAAATATCATCCTTCAGTGGAATGTCAGACGATGGCTGCTACCAATGAAAAGCTGAAAGAGAAAGAGCTCGCCGTTGAAGGTGGTGCCATTAGTATATCAAGCGTGTACTCAAAAGGGTTGTTGCATACGCTTACACATGCACTGCAAAGTTCAGGGGTGGATTTGTCACAGGCTAGCATCTCGGTGCAAATTGAACTTGGTAAGCAAGCAAACATCAGACCAACTGTACCAATGTCAATGTGTGGTGCTAAGGATGATGAAGTTCCTTCAAACAATCAAAAGATGATGCGCTCTAGAGTTGCTAGCTCCGGGAAGTCTGACCAAGCAGTTAAGAAGCTAAAGACGTGCAGAAGTTAA 1713 0.4431 MELPQARPFGTEGRKPTHDFLSLYSNSTAQQDPRPSSQGSYLKTHDFLQPLERQETKASAKEEATDEISSVAQKPPSSAPPPSVEHLLPGGIGTYSISHISCFNNNNQRVPKPEAALYTVRQATTSTDRNDDNSNCSSYTSSGFTLWEESSVKRGKTGKENNVGEKPTLGGTESSAKLGQWTLTERTSQSFPNNRHSSFSSRSSSQTNGQKNQSFIEMMKSAKDSAQDEVLENEETFFLKKEPSNTQRAELRVKVDGKSTDQKPNTPRSKHSATEQRRRSKINDRFQTLRELIPHSDQKRDKASFLLEVIEYIHFLQEKVHKYEGSLQGWSNEPEKLMAWQRNNDKPAAESFQPRGTDSGSCPSPTLLFASKVDEKNITITQTIPRGTQNLESGFNTATTSKTMDHQAGTMNKAFPIPISSQLNFFTPTQIGGPVGIVSQLAHRSASDAENTKYHPSVECQTMAATNEKLKEKELAVEGGAISISSVYSKGLLHTLTHALQSSGVDLSQASISVQIELGKQANIRPTVPMSMCGAKDDEVPSNNQKMMRSRVASSGKSDQAVKKLKTCRS* 571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g2926 570 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 266 316 IPR011598 GO:0046983
Apr9g2926 570 PANTHER TRANSCRIPTION FACTOR BIM1 1 567 - -
Apr9g2926 570 PANTHER BES1-INTERACTING MYC-LIKE PROTEIN 1 567 IPR044295 GO:0003700|GO:0006351|GO:0046983
Apr9g2926 570 MobiDBLite consensus disorder prediction 20 44 - -
Apr9g2926 570 Pfam Helix-loop-helix DNA-binding domain 268 317 IPR011598 GO:0046983
Apr9g2926 570 MobiDBLite consensus disorder prediction 545 561 - -
Apr9g2926 570 CDD bHLH_AtBIM_like 265 341 - -
Apr9g2926 570 Gene3D - 263 339 IPR036638 GO:0046983
Apr9g2926 570 SMART finulus 272 322 IPR011598 GO:0046983
Apr9g2926 570 MobiDBLite consensus disorder prediction 1 90 - -
Apr9g2926 570 MobiDBLite consensus disorder prediction 236 282 - -
Apr9g2926 570 MobiDBLite consensus disorder prediction 167 211 - -
Apr9g2926 570 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 264 335 IPR036638 GO:0046983
Apr9g2926 570 MobiDBLite consensus disorder prediction 150 211 - -
Apr9g2926 570 MobiDBLite consensus disorder prediction 48 68 - -
Apr9g2926 570 MobiDBLite consensus disorder prediction 536 570 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g2926 Apr-Chr9 36120348 36128580 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g2926 1 522 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G08130 49.816 4.51e-131 392
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Apr9g2926 HLH 1.5e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g2926 - - gmx:100808016 911.368
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g2926 9 36120348 36128580 Apr9g2926 9 36120348 36128580 ECH