Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g2921 ATGGGGTGCTCGTTCTCCGGTCTTAATGCACTTTACGATTCCGTTAACGGAGCCGGCGATGTGTGGATCAACGAGAACCGTTTCCGCATCGTGAGGCAGCTCGGAGAAGGTGGCTTCGCCTACGTTTACCTCGTCAAGGAGGTGCTCAACGACTCTGCCGCTGGTGGCCTTGCTAAAAAGCTCAAACACTCCTCTCATCTCTCTGATGATGGAACTTATGCTATGAAAAAGGTCCTCATTCAGAACAATGAACAGCTGGAATTGGTCAGGGAGGAGATCCGTGTTTCATCACTGTTCAATCACCCCAATCTGCTCCCACTTCTTGACCACGCAATCATTTCTGTTCAACAGCCTGCCCAAGGAACATCTTGGAACCATGAGGCATACTTGTTATTTCCAGTTCATTTGGATGGAACCCTGCTAGACAATGCAAAAATAATGAAAGCCAAGAAGGAATTCTATTCTACCTCAGATGTACTTCAAATATTTCGCCAGCTTTGTTCAGGACTCAAGCATATGCACGGTTTTGAACCTCCATATGCACATAATGATGTCAAACCTGGTAATGTTCTCATAACACACAGAAAAGGACAACCACCTCTTGCCATACTGATGGATTTTGGCAGTGCTCGTCCTGCCAGGAAACAAATTAGCTCCAGATCAGAGGCACTCCAGTTGCAGGAATGGGCATCTGAACATTGCTCTGCTCCTTTCCGAGCTCCTGAGCTGTGGGATTGCCCAAGCCATGCTGATATAGATGAGAGGACTGACATTTGGTCTCTAGGATGCACATTATATGCTATAATGTATGGGGTATCACCATTTGAATATGCACTTGGAGAGTCTGGTGGAAGCCTGCAATTGGCTGTTGTAAATGCTCAGGTCAAATGGCCAGCTGGACCAAAGTCCTCATATCCAGAAGCTCTTCATCAGTTTGTGTCATGGATGCTTCAGCCGCAGGCTGCTATGCGGCCTCGGATAGATGATATCATTATCCATGTTGATAAGTTGATTGCAAAGTTCTCTCCTTGA 1032 0.4651 MGCSFSGLNALYDSVNGAGDVWINENRFRIVRQLGEGGFAYVYLVKEVLNDSAAGGLAKKLKHSSHLSDDGTYAMKKVLIQNNEQLELVREEIRVSSLFNHPNLLPLLDHAIISVQQPAQGTSWNHEAYLLFPVHLDGTLLDNAKIMKAKKEFYSTSDVLQIFRQLCSGLKHMHGFEPPYAHNDVKPGNVLITHRKGQPPLAILMDFGSARPARKQISSRSEALQLQEWASEHCSAPFRAPELWDCPSHADIDERTDIWSLGCTLYAIMYGVSPFEYALGESGGSLQLAVVNAQVKWPAGPKSSYPEALHQFVSWMLQPQAAMRPRIDDIIIHVDKLIAKFSP* 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g2921 343 CDD STKc_16 27 339 - -
Apr9g2921 343 ProSitePatterns Serine/Threonine protein kinases active-site signature. 180 192 IPR008271 GO:0004672|GO:0006468
Apr9g2921 343 ProSitePatterns Protein kinases ATP-binding region signature. 34 60 IPR017441 GO:0005524
Apr9g2921 343 PANTHER - 1 342 - -
Apr9g2921 343 ProSiteProfiles Protein kinase domain profile. 28 338 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr9g2921 343 SMART serkin_6 28 338 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr9g2921 343 PANTHER SERINE/THREONINE-PROTEIN KINASE 16 1 342 - -
Apr9g2921 343 SUPERFAMILY Protein kinase-like (PK-like) 20 333 IPR011009 -
Apr9g2921 343 Gene3D Transferase(Phosphotransferase) domain 1 16 342 - -
Apr9g2921 343 Pfam Protein kinase domain 66 333 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g2921 Apr-Chr9 36052715 36058115 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g2921 33 333 EF-hand Containing Proteins AT4G04710 24.104 9.70e-12 63.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NAK Apr9g2921 Pkinase 2.6e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g2921 K08856 - gmx:100803659 654.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g2921 9 36052715 36058115 Apr9g2921 9 36052715 36058115 ECH