Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g2905 ATGGGTGGGGGGAGAAGGAGGAGGCACCACTTCAGCAGAATCCATGCATTCTCATGTGGGAAAGCTTCTATGAAGGATGAACATTCACTTATAGGAGGTCCTGGCTTCTCAAGGAAGGTTTATTGCAATGACCCCGAACATGCCATGACGAGTCTTCAGAATTATGGAGACAATTATGTCAGAACTACTAAGTATACATTGGCCACGTTCCTACCCAAGTCCTTGTTTGAGCAATTTAGAAGGGTTGCAAATTTCTACTTCCTTGTTTGTGCAGTTTTGTCTTTCTTGCCTGTTTCTCCTTACTCAGCCATCAGTAATGTTGTTCCTCTTCTGGTTGTGGTCGCTGCCACAATGGCCAAAGAGTTCATCGAGGATTTTAGGAGGAAACAACAGGATATAGAGATGAATAACAGGAAAGTTAAAGTACATCGTGGAGATGGTGGTTTTGACTATTCTAAATGGAGGGATTTGAAAGTTGGAGACGTAGTGAAGGTGGAAAAAGATGAATTTTTTCCTGCTGATCTCATCTTACTTTCATCAAATTATGATGATGCAATATGCTACGTTGAGACCATGAATCTTGATGGAGAGACAAATCTTAAACTGAAACAAGCACTGGAAGGAACCTCAAAGTTGCAAGAGGACTCAGCCTTTCAAAATTTCAAGGCTGTCATCAAATGTGAAGATCCAAATGCAAATTTGTACACATTTGTTGGCAGTTTGGAGCTTGAGGATCAACAGTATCCTCTTGCACCTCAGCAGCTTTTGCTTAGGGACTCTAAGCTGAGGAACACTGATTTTGTTTTTGGTGTGGTAATCTTTACTGGTCATGATACAAAGGTTATGCAGAATTCCACAGACCCTCCATCCAAGCGGAGCAAAGTTGAGAGAAGAATGGATAAGATCATCTATTGTCTCTTCTTTGTCCTTATTTTGATTTCTTTCATTGGATCCATATTATTTGGAGTTGCCACAAAGGATGACCTTAAAAATGGAAGGATGAAGAGATGGTACCTTAGACCTGATGATACCAAAATTTACTATGACCCGAATAAAGCTGCAGTTGCAGCGATTCTGCACTTCTTGACAGCGCTTATGTTGTATAGTTACTTGATTCCAATTTCCTTATATGTCTCCATTGAAATTGTAAAAGTTCTTCAAAGCATTTTCATCAACCAGGATGGAAACATGTATTATGAGGAAACTGATAAGCCAGCACGTGCTCGTACATCAAATTTGAATGAAGAACTTGGTCAAGTTGATACCATACTTTCAGATAAAACAGGGACTTTGACTTGCAATTCCATGGAATTTATCAAGTGTTCTATTGCTGGAGTTGCTTATGGACGAGGAGTTACAGAAGTTGAGAGAGCTCTATCTAGGAGACATGAATCACCTTTAGGTCTGGAGTTGAAAGAAAAGAAGAATACTACAAAGATTGGTGAGTCAAAGTCATCTGTTAAAGGGTTTAACTTTAAGGATGAAAGGATCATGAATGGAAATTGGGTCAAAGAACCCAACGCCAATGTAATCCAAAACTTCCTACGTTTGCTGGCTGTATGCCATACTGCAATACCTGAAGTTGATGAAGAAACTGGTAAGGTTTCATATGAAGCCGAATCACCAGATGAGGCAGCTTTTGTGATTGCAGCCAGAGAACTTGGGTTTGAATTTTATGAAAGGACACATACAACTATTTCACTAAATGAATATGACCATGCATCGGGCATGAAAATTAAAAGGTCATACAAACTTTTGAATATATTAGAGTTTAGTAGTGCAAGAAAGCGGATGTCAGCAATTGTAAGAGATGAAGAGGGGAAACTACTACTACTTAGCAAAGGCGCTGATAGTGTCATGTTTGAACGAATTGCAAAGAATGGAAGGGAGTTTGAAGAGAAGACCAAGCAGCACATAAGTGAATATGCTGATTCTGGTTTGAGGACCTTGATACTTGCATATCGTGAACTTGATGAAGAAGAATACAATCAATTTAATAAAGAGTTGACACAGGCCAAGAACTTAGTGAGTGCATATCAGGAACAGATTGTCGAGGAAATAGTACAAAATATTGAGAAGGATTTAATTCTTCTTGGTGCTACTGCAGTTGAAGACAAACTACAAGATGGGGTTCCTGAATGCATTGACAAGCTTGCACAGGCTGGGATTAAACTGTGGGTTTTGACTGGTGATAAAATGGAGACAGCAATTAATATTGGATTTGCTTGTAGTTTACTCAGATCAGGAATGAAACAAATTATAATTACCTCAGATACTCCTGAAATCAAATCAATGGAAAAAATGGAGGACAAGTCTGCCTCTGAGGCGGCAATCAAGTCAAATGTTCTTCGTCAAATAAAGGACGCAAAGGAATTACTTTCTAAATCAGATAAAAACTTTGAGGCCTTAGCCCTGATCATTGATGGGAAGTCTCTTACTTATGCACTAGAAGATGATGTAAAGGACCTCTTTCTTGAACTTGCCATTGGCTGTGCATCTGTTATCTGCTGTCGTTCATCTCCCAAGCAGAAAGCACTTGTTACAAGACTGGTGAAGATTAGAACTGGAAGTACTACTCTAGCTATTGGAGATGGGGCAAATGATGTTGGAATGCTCCAAGAAGCTGACATTGGGATTGGTATCAGTGGTGTTGAAGGAATGCAGGCAGTTATGTCAAGTGATATTGCAATTGCCCAATTTCGGTTTCTAGAGCGCTTACTTCTTGTGCATGGACATTGGTGTTATAGAAGGATCTCATCAATGATCTGCTACTTCTTTTACAAGAATATTGCCTTTGGCTTCACTCTGTTCTTCTTTGAGATGTATGCCTCATTCTCAGGGCAAGCTGCGTACAATGATTGGTTCTTGTCACTATACAACGTGTTCTTCACTTCCCTTCCTGTAATTGCTTTGGGAGTGTTTGACCAGGATGTTTCTGCTAAATTATGTCTCAGGTTCCCATTATTATATCAAGAAGGTGTGCAAAACATCCTATTTAGCTGGAAACGAATAATTGGTTGGGCACTGAATGGAGTTGTGAGTGCTGCCATCATATTCTTCTTTTGCATTCGTGCCATGGAACATCAAGCATTCCGTAAAGGTGGTGAAGTTGTGGGGCTAGAAGTTCTTGGTGCCACAATGTACACTTGTGTTGTGTGGGTGGTGAATTGTCAAATGGCATTATCTATCAGTTACTTCACATACATACAACACGTATTCATATGGGGAGGCATTCTGTTTTGGTACATATTCCTCCTAGCATATGGAGCCATTGATCCTTCCCTCTCAACCACTGCTTATAAGGTCTTTGTTGAAGCTCTTGCACCAGCTCCATCTTACTGGGTCATCACTTTCCTTATTGTTATTTCTTCACTCCTTCCATATTTTGCCTATGCTTCCATCCAAATGCGGTTCTTTCCTATGTATCATCAAATGATACAATGGATACGAAATGATGGCCAAACAAATGATCCAGAATACTGTAACGTGGTGAGGCAGAGATCAATAACACACACAACAGTTGGATTCACAGCGCGTTTGGAAGCATCCAAGCGATTTGAAGCATCCAAGCGTTCTGAAGCATCCAAACATTTTGAAGGGAAGTCTGAGAATCAATAA 3618 0.3997 MGGGRRRRHHFSRIHAFSCGKASMKDEHSLIGGPGFSRKVYCNDPEHAMTSLQNYGDNYVRTTKYTLATFLPKSLFEQFRRVANFYFLVCAVLSFLPVSPYSAISNVVPLLVVVAATMAKEFIEDFRRKQQDIEMNNRKVKVHRGDGGFDYSKWRDLKVGDVVKVEKDEFFPADLILLSSNYDDAICYVETMNLDGETNLKLKQALEGTSKLQEDSAFQNFKAVIKCEDPNANLYTFVGSLELEDQQYPLAPQQLLLRDSKLRNTDFVFGVVIFTGHDTKVMQNSTDPPSKRSKVERRMDKIIYCLFFVLILISFIGSILFGVATKDDLKNGRMKRWYLRPDDTKIYYDPNKAAVAAILHFLTALMLYSYLIPISLYVSIEIVKVLQSIFINQDGNMYYEETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGVAYGRGVTEVERALSRRHESPLGLELKEKKNTTKIGESKSSVKGFNFKDERIMNGNWVKEPNANVIQNFLRLLAVCHTAIPEVDEETGKVSYEAESPDEAAFVIAARELGFEFYERTHTTISLNEYDHASGMKIKRSYKLLNILEFSSARKRMSAIVRDEEGKLLLLSKGADSVMFERIAKNGREFEEKTKQHISEYADSGLRTLILAYRELDEEEYNQFNKELTQAKNLVSAYQEQIVEEIVQNIEKDLILLGATAVEDKLQDGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRSGMKQIIITSDTPEIKSMEKMEDKSASEAAIKSNVLRQIKDAKELLSKSDKNFEALALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKIRTGSTTLAIGDGANDVGMLQEADIGIGISGVEGMQAVMSSDIAIAQFRFLERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLFFFEMYASFSGQAAYNDWFLSLYNVFFTSLPVIALGVFDQDVSAKLCLRFPLLYQEGVQNILFSWKRIIGWALNGVVSAAIIFFFCIRAMEHQAFRKGGEVVGLEVLGATMYTCVVWVVNCQMALSISYFTYIQHVFIWGGILFWYIFLLAYGAIDPSLSTTAYKVFVEALAPAPSYWVITFLIVISSLLPYFAYASIQMRFFPMYHQMIQWIRNDGQTNDPEYCNVVRQRSITHTTVGFTARLEASKRFEASKRSEASKHFEGKSENQ* 1206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g2905 1205 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 55 1147 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326
Apr9g2905 1205 Gene3D - 115 286 - -
Apr9g2905 1205 SFLD C1.7: P-type atpase like 408 913 - -
Apr9g2905 1205 PRINTS P-type cation-transporting ATPase superfamily signature 424 438 - -
Apr9g2905 1205 PRINTS P-type cation-transporting ATPase superfamily signature 748 758 - -
Apr9g2905 1205 PRINTS P-type cation-transporting ATPase superfamily signature 862 881 - -
Apr9g2905 1205 Pfam Cation transport ATPase (P-type) 521 623 - -
Apr9g2905 1205 Gene3D - 542 672 IPR023299 GO:0000166
Apr9g2905 1205 SUPERFAMILY Calcium ATPase, transduction domain A 137 284 IPR008250 -
Apr9g2905 1205 SUPERFAMILY HAD-like 419 917 IPR036412 -
Apr9g2905 1205 Coils Coil 655 682 - -
Apr9g2905 1205 ProSitePatterns E1-E2 ATPases phosphorylation site. 426 432 IPR018303 -
Apr9g2905 1205 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 1 1185 - -
Apr9g2905 1205 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 828 945 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Apr9g2905 1205 Pfam Phospholipid-translocating ATPase N-terminal 40 105 IPR032631 -
Apr9g2905 1205 SFLD p-type atpase 408 913 IPR044492 -
Apr9g2905 1205 SUPERFAMILY Calcium ATPase, transmembrane domain M 47 1140 IPR023298 -
Apr9g2905 1205 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 1 1185 - -
Apr9g2905 1205 Gene3D - 694 902 IPR023214 -
Apr9g2905 1205 CDD P-type_ATPase_APLT_Dnf-like 57 1022 - -
Apr9g2905 1205 Pfam Phospholipid-translocating P-type ATPase C-terminal 890 1140 IPR032630 -
Apr9g2905 1205 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 483 666 IPR023299 GO:0000166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g2905 Apr-Chr9 35947706 35954422 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g2905 1 1185 Primary Pumps ATPases AT1G68710 69.836 0.0 1798
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g2905 K01530 K14802 gmx:100799312 2118.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g2905 9 35947706 35954422 Apr9g2905 9 35947706 35954422 ECH