Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g2903 ATGGAGCCCATGGACATCGTTGGCAAATCCAAGGAAGATGCCTCGCTTCCTAAAGCAACAATGACAAAAATTATTAAAGAGATGTTACCCCCAGATGTACGGGTTGCAAGAGATGCCCAAGATCTATTGATCGAGTGTTGTGTAGAGTTTATAAACCTTGTATCGTCAGAATCCAATGAAGTCTGTAACAGAGAGGATAAACGGACAATTGCACCTGAGCATGTGTTGAAGGCTCTAGAGGTTCTTGGATTTGGTGAGTACATAGAAGAAGTTTATGCAGCATACGAACAACACAAGCTGGAGACCATGGACTCTTTGAAAGGTGGTAAATGGAGCACTGGAGCTGAGATGACTGAGGAAGAAGCATTAGCAGAGCAGCAAAGGATGTTCGCAGAGGCACGTGCTAGAATGAATGGTGGAGCCATTGCTTCCAAGCAGCCAGATGCTGACCAAAGTTTAGATAGCTAA 468 0.4444 MEPMDIVGKSKEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVSSESNEVCNREDKRTIAPEHVLKALEVLGFGEYIEEVYAAYEQHKLETMDSLKGGKWSTGAEMTEEEALAEQQRMFAEARARMNGGAIASKQPDADQSLDS* 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g2903 155 Gene3D Histone, subunit A 4 142 IPR009072 GO:0046982
Apr9g2903 155 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 14 79 IPR003958 -
Apr9g2903 155 PANTHER PROTEIN DR1 HOMOLOG 1 154 IPR044255 -
Apr9g2903 155 SUPERFAMILY Histone-fold 12 142 IPR009072 GO:0046982
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g2903 Apr-Chr9 35921380 35926052 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g2903 1 151 CCAAT-DR1 Transcription Factor Family AT5G23090 83.766 1.34e-92 264
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Apr9g2903 CBFD_NFYB_HMF 3.9e-22 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g2903 K21751 - gmx:100807912 293.508
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g2903 9 35921380 35926052 Apr9g2903 9 35921380 35926052 ECH