Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g2899 ATGGCTACAAGGATTTTAGCATGGAGGTGCCATTTTGTTCTTTGTTTTGTGTTACTCATTTTGTTTTGTCTTTGTAAGGGCCAAGACTTTTCCTTGACTCCAATGAAGAAGAAAGAGCAGGTAGTCATATACAGGGTTATTCAAGGTTTTGTTGGAAAGTGGTGGAATGGTTCATATCTTTATCCAGATCCTTGTGGGTGGACTCCTATACAGGGAGTTTCCTGTGAGCAATATGATGATGGCTTCTGGTATGTAACAGCTATAAACTTTGGACCAGTTTTTGACAACTATCTCACTTGCAACCATGGTGCTCATTTGAGGAAGCTTCAATCTTTGGTGCTGCTAGAAAATGGGCTAACAGGTAAACTACCACCAAGTATTGGTAAATTGGTCAAGTTGAAGCAACTAGTCCTTGCAGGAAACTATTTGGTGGGTGAGGTTCCAATGAGCTATGGAGGGTTTTCTGAGCTTTTAATATTTGATGCAAGCAGGAATAAACTATCAGGAGTTCTGCCATCAACAATTGGACTTTTGGATTCAATTCTGAAGATTGATTTGAGCTACAATATGCTACAGGGAGAATTACCAAGGGAGCTGGGAAGGCTAAAGAATCTTACTTTACTTGATATTAGTCATAACAAACTTAGCGGTGGGTTAGCGACACTCAAAGAAATGGTGTCCTTAAAGGATTTGGTTTTGTCCAACAACCCAATAGGGGGTGATCTCTTGGGAATTAGATGGGAAATTTTCCAAAACATAGAAGCCTTAGACCTTTCTAACATGGGTTTGGTAGGGATTGTACCAGAGTCCATGGCAGAAATGAAAAGGCTTAGATTTTTGGACCTCAGTAACAATAATCTTTCTGGAAGTCTCTCTAGAAGTTTGGAAAACCTGCCATGTCTTAGAGCACTTCACATAAATGGAAATAATCTGGCAGGGAGACTTGACTTCTCAGAAAGGTTTTACAGCAAAACGGGAATGCGTTTTGCAGCTTGGAATAATGCAAACCTATGTTACATTGCCAAACCAACACGCCAAATTCCTGATGGCCTAAAACCTTGTTTTGAAGTTGGAGGTAAAGATGGTTGGGTTGTTCCCAAGGACAATGCTCAAACGTACAATCAGTGGGCATCCGAAAACAGATTCAAAGTTAATGACACTCTTCGATTCAAGTACGAGAATGACTCGGTTATGGTGGTGACTGAAGAAGAGTATGAAAAATGCAAATCCTCTCATCCCATATTTTTCTCTAACAACGGTGACACTGTTTTCAAATTTGACCGTCCTGGCTTGTTCTTCTTCATTAGTGGGGTTAGTGGTCACTGTAACAGAGGCGAAAAAATGATCATAAAGGTTTTGGACTTAGAGGCAGCACCTTCACCACAATCTGCAAATGAGAGTGCACAACAATCACCTTCTAAAAGTGGAATTTCTCAAATGACTCCAATGAATATAATAACAATTTTTGTCATGTCAATCTTTGGCATGCAGCTTTATGCTTGA 1503 0.3999 MATRILAWRCHFVLCFVLLILFCLCKGQDFSLTPMKKKEQVVIYRVIQGFVGKWWNGSYLYPDPCGWTPIQGVSCEQYDDGFWYVTAINFGPVFDNYLTCNHGAHLRKLQSLVLLENGLTGKLPPSIGKLVKLKQLVLAGNYLVGEVPMSYGGFSELLIFDASRNKLSGVLPSTIGLLDSILKIDLSYNMLQGELPRELGRLKNLTLLDISHNKLSGGLATLKEMVSLKDLVLSNNPIGGDLLGIRWEIFQNIEALDLSNMGLVGIVPESMAEMKRLRFLDLSNNNLSGSLSRSLENLPCLRALHINGNNLAGRLDFSERFYSKTGMRFAAWNNANLCYIAKPTRQIPDGLKPCFEVGGKDGWVVPKDNAQTYNQWASENRFKVNDTLRFKYENDSVMVVTEEEYEKCKSSHPIFFSNNGDTVFKFDRPGLFFFISGVSGHCNRGEKMIIKVLDLEAAPSPQSANESAQQSPSKSGISQMTPMNIITIFVMSIFGMQLYA* 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g2899 500 Pfam Plastocyanin-like domain 363 445 IPR003245 GO:0009055
Apr9g2899 500 ProSiteProfiles Phytocyanin domain profile. 353 454 IPR003245 GO:0009055
Apr9g2899 500 CDD OsENODL1_like 355 453 IPR041846 -
Apr9g2899 500 PANTHER PIRIFORMOSPORA INDICA-INSENSITIVE PROTEIN 2-LIKE 105 496 - -
Apr9g2899 500 PANTHER PIRIFORMOSPORA INDICA-INSENSITIVE PROTEIN 2-LIKE 21 107 - -
Apr9g2899 500 Pfam Leucine rich repeat 252 311 IPR001611 GO:0005515
Apr9g2899 500 SMART LRR_sd22_2 225 255 - -
Apr9g2899 500 SMART LRR_sd22_2 274 300 - -
Apr9g2899 500 SMART LRR_sd22_2 202 221 - -
Apr9g2899 500 Gene3D Ribonuclease Inhibitor 43 221 IPR032675 -
Apr9g2899 500 ProSiteProfiles Leucine-rich repeat profile. 276 299 IPR001611 GO:0005515
Apr9g2899 500 Gene3D - 354 457 IPR008972 -
Apr9g2899 500 PANTHER RECEPTOR-LIKE PROTEIN 14 105 496 - -
Apr9g2899 500 PANTHER RECEPTOR-LIKE PROTEIN 14 21 107 - -
Apr9g2899 500 SUPERFAMILY Cupredoxins 355 453 IPR008972 -
Apr9g2899 500 Gene3D Ribonuclease Inhibitor 222 344 IPR032675 -
Apr9g2899 500 PRINTS Leucine-rich repeat signature 205 218 - -
Apr9g2899 500 PRINTS Leucine-rich repeat signature 274 287 - -
Apr9g2899 500 SUPERFAMILY L domain-like 45 318 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g2899 Apr-Chr9 35897925 35902207 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g2899 355 453 Phytocyanin Superfamily AT3G18590 68.317 2.93e-46 158
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g2899 - - aprc:113874787 984.171
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g2899 9 35897925 35902207 Apr9g2899 9 35897925 35902207 ECH