Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g2869 ATGGCTTCACCGTCCGAACTAAGCCTCGATTGCAAGCCACATAGCTATTCCTTGCTACTCAAATCATTTGGAGATCAAACTGATCAGACCTACAAGCTTGAAGAATTCCTTTCTCGCTTAGAGGAAGAACGTCTCAAGATTGATGCCTTCAAGCGTGAACTTCCTCTCTGCATGCAACTCCTCACCAACGCGATGGAGGCTTCAAGGCAGCAACTTCAGGCCTTCAAAGTAAGTCAAAGCACAAAGCCAGTTCTTGAAGAATTCATACCCATGAAACACTTAACCTCTGAAAGCTCTGAGAAAGCAACAAACATGTCCGACAAGGCAAATTGGATGACAACTGCACAACTGTGGAGCCAAGCAAGCGAAGGAACCAAACAACAAGCTGCAATCACGTCACCAAAAGAAGCTGACATGGGCTTCAGCATGAGCCCAAAGCTAGCTCTAGACAACAAACAAAGGAATGGTGGAGGAGCCTTTCTCCCATTCTCAAAAGAGCGAAACTCTTGCCAAGGCTCCACATTGCGACCTCTCCCTGAACTGGCTCTTGCTTCTGCAGAGAAAGAAATTGAAGACAAGAAACGTGGAGAGGGAGAGAAGGGTGTTTCATGTCAGAATAAGAAGGAGAATTCAGCAAGTGATGGTGCTGTAATTGATCAAGGAAAAGGGAATAGTCCAGTTGCATCATCTCAGGCACAAACAACCACAACTACACAAACTCATAGGAAAGCAAGAAGGTGTTGGTCACCAGACCTGCACCGTCGATTTGTTAATGCTCTCCAAATGCTTGGTGGATCTCAAGTGGCCACCCCAAAACAGATAAGGGAGTTGATGAAGGTTGACGGTTTGACCAATGATGAAGTTAAAAGCCATTTGCAGAAGTATAGGCTTCACACCAGAAGACCAAGTCCAAGTCCTCAAACAGGTGCAGGAGCACCACAGCTTGTGGTCCTAGGAGGAATCTGGGTCCCACCGGAATATGCCACGGCGGCTGCCGCCCATACAGCCACTCCTACTCTCTACGGTGCCCACCCTACCTCCCACGCGCCGCCGCCACACTATTGTGCCGCCACCCCAGTTCCCCAAGAGTTCTACACTGCAGCGCCGCAGCAGCCGCTGCTTCCGCCGCCTCCGCCGCACCACAACGCTCTCCATCACCTGCACATGTACAAGGCGGCGCACCACGGGCACAGCTCGCCGGAATCTGACGTTCCGGGAGGCGGGAACCGGTCGGAGAGTATTGAGGATGGGAAATCGGAGAGTAGCAGCTGGAAAGGGGAGAGTGGGGAGAACGAAGGGGAGAGAAAAGGGTTGGCTGAGGAGAGTAATGGGAGTGAGATCACTCTCAAATTCTAG 1356 0.5081 MASPSELSLDCKPHSYSLLLKSFGDQTDQTYKLEEFLSRLEEERLKIDAFKRELPLCMQLLTNAMEASRQQLQAFKVSQSTKPVLEEFIPMKHLTSESSEKATNMSDKANWMTTAQLWSQASEGTKQQAAITSPKEADMGFSMSPKLALDNKQRNGGGAFLPFSKERNSCQGSTLRPLPELALASAEKEIEDKKRGEGEKGVSCQNKKENSASDGAVIDQGKGNSPVASSQAQTTTTTQTHRKARRCWSPDLHRRFVNALQMLGGSQVATPKQIRELMKVDGLTNDEVKSHLQKYRLHTRRPSPSPQTGAGAPQLVVLGGIWVPPEYATAAAAHTATPTLYGAHPTSHAPPPHYCAATPVPQEFYTAAPQQPLLPPPPPHHNALHHLHMYKAAHHGHSSPESDVPGGGNRSESIEDGKSESSSWKGESGENEGERKGLAEESNGSEITLKF* 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g2869 451 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 451 IPR044787 GO:0003700|GO:0006355
Apr9g2869 451 Coils Coil 33 53 - -
Apr9g2869 451 MobiDBLite consensus disorder prediction 392 451 - -
Apr9g2869 451 PANTHER MYB-LIKE TRANSCRIPTION FACTOR FAMILY PROTEIN 1 451 - -
Apr9g2869 451 Pfam Myb-like DNA-binding domain 245 296 IPR001005 -
Apr9g2869 451 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 243 298 IPR006447 GO:0003677
Apr9g2869 451 MobiDBLite consensus disorder prediction 413 441 - -
Apr9g2869 451 MobiDBLite consensus disorder prediction 158 245 - -
Apr9g2869 451 Gene3D - 242 300 - -
Apr9g2869 451 SUPERFAMILY Homeodomain-like 240 301 IPR009057 -
Apr9g2869 451 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 240 300 IPR017930 -
Apr9g2869 451 MobiDBLite consensus disorder prediction 185 204 - -
Apr9g2869 451 MobiDBLite consensus disorder prediction 223 243 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g2869 Apr-Chr9 35584909 35587491 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g2869 1 451 G2-like Transcription Factor Family AT2G03500 50.207 1.85e-131 384
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Apr9g2869 Myb_DNA-binding 9.7e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g2869 - - gmx:100807925 760.755
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g2869 9 35584909 35587491 Apr9g2869 9 35584909 35587491 ECH