Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Apr9g2869 | ATGGCTTCACCGTCCGAACTAAGCCTCGATTGCAAGCCACATAGCTATTCCTTGCTACTCAAATCATTTGGAGATCAAACTGATCAGACCTACAAGCTTGAAGAATTCCTTTCTCGCTTAGAGGAAGAACGTCTCAAGATTGATGCCTTCAAGCGTGAACTTCCTCTCTGCATGCAACTCCTCACCAACGCGATGGAGGCTTCAAGGCAGCAACTTCAGGCCTTCAAAGTAAGTCAAAGCACAAAGCCAGTTCTTGAAGAATTCATACCCATGAAACACTTAACCTCTGAAAGCTCTGAGAAAGCAACAAACATGTCCGACAAGGCAAATTGGATGACAACTGCACAACTGTGGAGCCAAGCAAGCGAAGGAACCAAACAACAAGCTGCAATCACGTCACCAAAAGAAGCTGACATGGGCTTCAGCATGAGCCCAAAGCTAGCTCTAGACAACAAACAAAGGAATGGTGGAGGAGCCTTTCTCCCATTCTCAAAAGAGCGAAACTCTTGCCAAGGCTCCACATTGCGACCTCTCCCTGAACTGGCTCTTGCTTCTGCAGAGAAAGAAATTGAAGACAAGAAACGTGGAGAGGGAGAGAAGGGTGTTTCATGTCAGAATAAGAAGGAGAATTCAGCAAGTGATGGTGCTGTAATTGATCAAGGAAAAGGGAATAGTCCAGTTGCATCATCTCAGGCACAAACAACCACAACTACACAAACTCATAGGAAAGCAAGAAGGTGTTGGTCACCAGACCTGCACCGTCGATTTGTTAATGCTCTCCAAATGCTTGGTGGATCTCAAGTGGCCACCCCAAAACAGATAAGGGAGTTGATGAAGGTTGACGGTTTGACCAATGATGAAGTTAAAAGCCATTTGCAGAAGTATAGGCTTCACACCAGAAGACCAAGTCCAAGTCCTCAAACAGGTGCAGGAGCACCACAGCTTGTGGTCCTAGGAGGAATCTGGGTCCCACCGGAATATGCCACGGCGGCTGCCGCCCATACAGCCACTCCTACTCTCTACGGTGCCCACCCTACCTCCCACGCGCCGCCGCCACACTATTGTGCCGCCACCCCAGTTCCCCAAGAGTTCTACACTGCAGCGCCGCAGCAGCCGCTGCTTCCGCCGCCTCCGCCGCACCACAACGCTCTCCATCACCTGCACATGTACAAGGCGGCGCACCACGGGCACAGCTCGCCGGAATCTGACGTTCCGGGAGGCGGGAACCGGTCGGAGAGTATTGAGGATGGGAAATCGGAGAGTAGCAGCTGGAAAGGGGAGAGTGGGGAGAACGAAGGGGAGAGAAAAGGGTTGGCTGAGGAGAGTAATGGGAGTGAGATCACTCTCAAATTCTAG | 1356 | 0.5081 | MASPSELSLDCKPHSYSLLLKSFGDQTDQTYKLEEFLSRLEEERLKIDAFKRELPLCMQLLTNAMEASRQQLQAFKVSQSTKPVLEEFIPMKHLTSESSEKATNMSDKANWMTTAQLWSQASEGTKQQAAITSPKEADMGFSMSPKLALDNKQRNGGGAFLPFSKERNSCQGSTLRPLPELALASAEKEIEDKKRGEGEKGVSCQNKKENSASDGAVIDQGKGNSPVASSQAQTTTTTQTHRKARRCWSPDLHRRFVNALQMLGGSQVATPKQIRELMKVDGLTNDEVKSHLQKYRLHTRRPSPSPQTGAGAPQLVVLGGIWVPPEYATAAAAHTATPTLYGAHPTSHAPPPHYCAATPVPQEFYTAAPQQPLLPPPPPHHNALHHLHMYKAAHHGHSSPESDVPGGGNRSESIEDGKSESSSWKGESGENEGERKGLAEESNGSEITLKF* | 452 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Apr9g2869 | 451 | PANTHER | MYB FAMILY TRANSCRIPTION FACTOR | 1 | 451 | IPR044787 | GO:0003700|GO:0006355 | |
Apr9g2869 | 451 | Coils | Coil | 33 | 53 | - | - | |
Apr9g2869 | 451 | MobiDBLite | consensus disorder prediction | 392 | 451 | - | - | |
Apr9g2869 | 451 | PANTHER | MYB-LIKE TRANSCRIPTION FACTOR FAMILY PROTEIN | 1 | 451 | - | - | |
Apr9g2869 | 451 | Pfam | Myb-like DNA-binding domain | 245 | 296 | IPR001005 | - | |
Apr9g2869 | 451 | TIGRFAM | myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class | 243 | 298 | IPR006447 | GO:0003677 | |
Apr9g2869 | 451 | MobiDBLite | consensus disorder prediction | 413 | 441 | - | - | |
Apr9g2869 | 451 | MobiDBLite | consensus disorder prediction | 158 | 245 | - | - | |
Apr9g2869 | 451 | Gene3D | - | 242 | 300 | - | - | |
Apr9g2869 | 451 | SUPERFAMILY | Homeodomain-like | 240 | 301 | IPR009057 | - | |
Apr9g2869 | 451 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 240 | 300 | IPR017930 | - | |
Apr9g2869 | 451 | MobiDBLite | consensus disorder prediction | 185 | 204 | - | - | |
Apr9g2869 | 451 | MobiDBLite | consensus disorder prediction | 223 | 243 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Apr9g2869 | Apr-Chr9 | 35584909 | 35587491 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Apr9g2869 | 1 | 451 | G2-like Transcription Factor Family | AT2G03500 | 50.207 | 1.85e-131 | 384 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | GARP-G2-like | Apr9g2869 | Myb_DNA-binding | 9.7e-06 | CL0123 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Apr9g2869 | - | - | gmx:100807925 | 760.755 |