Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g2867 ATGAAGGATCCAGTGGACGATCAAGTGAAATCTAGAAGGGCTCTTCAGAAAAAAAGAGAAAGAAGAAGAAGCCAATGTAAACAAGAACCCGGACTTGACTTACAATTATGTTCCTCAGCTTCTTGCGAAAGTCTTGTGTTTCCTTCCAGGCCTGGTTATGGCCAGCTTGGGACAAAGTGTCTGGTCAAAGCTAACCACTTTCTGGCTGATATATCAGTATCTGACTTAAGCCATTACAATGTTAAAATAACACCTGAAGTTACTTCTCGTAAAACAAGCAAAGCTATTATAGCTGAGTTAGTGAGACTTCACCGAAACACTGACTTGGGAATGAGGCTTCCTGTTTATGATGGAAGAAGAAACCTCTACACTGCTGGCTTGCTTCCTTTTGCATACAAAGAGTTTACCATACTATTGAGTGAGGATGATGAGGGTACTGGTAGTACCAGGGAAAGAGAATTTGAAGTGGTAATAAAGTTTGCAGCTCGTGTTACAATGAATCAATTACGTGAGCTTCTCAATGGGAAACAAGTGGACACCCCACAAGAAGCGCTTACTGTCATTGACATTGTGTTGAGGGAGCTTGCTGCTCAGAGCTATGTATCAATTGGAAGGTTTCTATATTCTCCGGATTTAAGAAAACCACAACAACTGGGTGGTGGCTTGGAATCATGGCGTGGCTTCTACCAGAGTATAAGGCCTACTCAGATGGGATTGTCTCTTAATATTGATATGTCATCAATGGCGTTTATTGAACCACTCCCAGTAATTGACTTTGTTGCTCAAATTTTGGGAAAAGATGTGCTTTCAAAGCCATTGTCAGATGCAGATCGTGTCAAGATTAAGAAAGCCTTAAGAGGTGTGAAAGTTGAAGTTACACACAGAGGAAGTTTTCGAAGGAAGTACAGGATTACAGGATTGACATCACAGCCTACAAGAGAGCTTGATTTCCCTGTAGATGAGAAAATGAACATGAAATCAGTAGTTGATTATTTTCAAGAAATGTATGGATATACGATCATATATTCTCATCTACCATGCCTCCAAGTAGGAAGCCAAAAAAAAGTGAACTACTTGCCAATGGAGGCGTGCAAGATAGTTGGGGGTCAGAGATATACAAAGGGACTTAACGAAAAGCAGATAACTTCTCTGCTAAAGGTCTCATGCCAGAGACCACGTGAACAGGAGACAGATATTTTGCAGACAATTCAACAAAATGATTATGAGTATAATCCCTATGCAAAGGAGTTTGGTATCAGCATAGACAGCAAGCTTGCATCAGTTGAGGCTCGGGTTCTTCCTGCTCCATGGTTGAAATATCACGACACTGGAAGGGAGAAAGAACACTTGCCACAAGTTGGTCAATGGAACATGATGAACAAGAAAGTTATAAACGGAAGCACCGTAAGATATTGGGCATGTATCAATTTCTCACGAAGTGTCCAAGAAAGTACAGCTCGTGGGTTTTGCCAACAATTGGTTCAAATGTGCCAAATCTCAGGCATGGAATTTAGTCAGGACCCTGTGATTCCTATATATTCAGCAAGACCTGATTTGGTGAAAAAGGCCTTGAAGTATGTACATTCTGCTGCACTAGATAAACTTGGTGGGAAAGAACTAGAGTTGCTGATTGCCATTCTTCCGGACAACAATGGCCCTCTTTATGGTGATCTCAAAAGAATCTGCGAAACAGATTTGGGGTTGATTTCTCAGTGCTGTCTTACAAAACATGTATTCAAGATTAATAGACAGTATTTGGCAAATGTGGCTCTAAAGATCAATGTCAAGATGGGAGGAAGGAACACAGTACTTTTGGATGCTCTAAGTTGGAGGATCCCATTGGTTAGTGACATCCCAACAATAATTTTTGGAGCTGATGTAACTCATCCAGAGTCTAGAGAGGACCCTTGTCCATCCATTGCTGCTGTTGTAGCCTCCCAGGACTGGCCGGAAGTTACAAAGTATGCTGGATTGGTATGTGCTCAGCCTCATCGTGAGGAACTCATTCAAGATCTTTTTAAATGTTGGAAGGATCCACACCATGGTATAGTTTATGGTGGCATGATCAGAGAGCTGTTACTCTCTTTTAAGAAGGCAACTGGACAAAAACCTTGGAGGATAATATTTTACAGGGATGGAGTAAGTGAAGGACAATTCTACCAGGTTTTGTTGTATGAGCTTGATGCCATCCGTAAGGCTTGTGCATCTTTGGAACCTAGTTACCAACCTCCGGTAACTTTTGTTGTGGTTCAAAAGCGGCATCACACTAGACTCTTCTCAAGCAATCATGATGACAGAAATAGCACTGATAAGAGTGGGAATATTTTACCTGGTACTGTGGTGGATTCTAAGATCTGTCATCCTACTGAATTTGACTTCTATTTATGCAGTCATGCAGGAATTCAGGGTACAAGTAGACCGGCTCATTATCATGTTCTGTGGGACGAAAACAATTTCACTGCTGATGAGATTCAATCTCTGACCAACAACTTATGCTACACCTATGCAAGATGTACACGATCTGTTTCAGTAGTGCCTCCTGCGTACTATGCTCATCTGGCAGCTTACAGAGCTCGATTCTACATGGAACCTGATGTTCCTGAGGTTGCTAAATCTCGAGGTGCAAGATCAAAAGATGAGTCAGTTCGACCACTACCAGCATTGAAAGAGAAGGTGAAGAATGTAATGTTTTACTGCTAA 2700 0.4156 MKDPVDDQVKSRRALQKKRERRRSQCKQEPGLDLQLCSSASCESLVFPSRPGYGQLGTKCLVKANHFLADISVSDLSHYNVKITPEVTSRKTSKAIIAELVRLHRNTDLGMRLPVYDGRRNLYTAGLLPFAYKEFTILLSEDDEGTGSTREREFEVVIKFAARVTMNQLRELLNGKQVDTPQEALTVIDIVLRELAAQSYVSIGRFLYSPDLRKPQQLGGGLESWRGFYQSIRPTQMGLSLNIDMSSMAFIEPLPVIDFVAQILGKDVLSKPLSDADRVKIKKALRGVKVEVTHRGSFRRKYRITGLTSQPTRELDFPVDEKMNMKSVVDYFQEMYGYTIIYSHLPCLQVGSQKKVNYLPMEACKIVGGQRYTKGLNEKQITSLLKVSCQRPREQETDILQTIQQNDYEYNPYAKEFGISIDSKLASVEARVLPAPWLKYHDTGREKEHLPQVGQWNMMNKKVINGSTVRYWACINFSRSVQESTARGFCQQLVQMCQISGMEFSQDPVIPIYSARPDLVKKALKYVHSAALDKLGGKELELLIAILPDNNGPLYGDLKRICETDLGLISQCCLTKHVFKINRQYLANVALKINVKMGGRNTVLLDALSWRIPLVSDIPTIIFGADVTHPESREDPCPSIAAVVASQDWPEVTKYAGLVCAQPHREELIQDLFKCWKDPHHGIVYGGMIRELLLSFKKATGQKPWRIIFYRDGVSEGQFYQVLLYELDAIRKACASLEPSYQPPVTFVVVQKRHHTRLFSSNHDDRNSTDKSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADEIQSLTNNLCYTYARCTRSVSVVPPAYYAHLAAYRARFYMEPDVPEVAKSRGARSKDESVRPLPALKEKVKNVMFYC* 900
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g2867 899 PANTHER PROTEIN ARGONAUTE 10 19 898 - -
Apr9g2867 899 MobiDBLite consensus disorder prediction 1 25 - -
Apr9g2867 899 Pfam N-terminal domain of argonaute 59 192 IPR032474 -
Apr9g2867 899 Gene3D - 611 899 IPR036397 GO:0003676
Apr9g2867 899 Pfam PAZ domain 279 384 IPR003100 GO:0005515
Apr9g2867 899 Gene3D paz domain 248 372 - -
Apr9g2867 899 ProSiteProfiles Piwi domain profile. 542 863 IPR003165 GO:0003676
Apr9g2867 899 SUPERFAMILY PAZ domain 249 408 IPR036085 GO:0005515
Apr9g2867 899 Pfam Mid domain of argonaute 451 528 IPR032473 -
Apr9g2867 899 ProSiteProfiles PAZ domain profile. 254 368 IPR003100 GO:0005515
Apr9g2867 899 SMART Piwi_a_2 542 863 IPR003165 GO:0003676
Apr9g2867 899 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 19 898 - -
Apr9g2867 899 SMART PAZ_2_a_3 258 390 IPR003100 GO:0005515
Apr9g2867 899 Gene3D - 432 605 - -
Apr9g2867 899 SMART DUF1785_2 201 253 IPR014811 -
Apr9g2867 899 CDD Piwi_ago-like 412 862 IPR045246 -
Apr9g2867 899 Pfam Argonaute linker 2 domain 396 440 IPR032472 -
Apr9g2867 899 CDD PAZ_argonaute_like 253 367 - -
Apr9g2867 899 Pfam Piwi domain 543 862 IPR003165 GO:0003676
Apr9g2867 899 SUPERFAMILY Ribonuclease H-like 531 864 IPR012337 -
Apr9g2867 899 Pfam Argonaute linker 1 domain 202 251 IPR014811 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g2867 Apr-Chr9 35555334 35565040 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g2867 47 899 Eukaryotic Initiation Factors Gene Family AT5G43810 74.913 0.0 1389
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g2867 K11593 - gmx:100798086 1700.64
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g2867 9 35555334 35565040 Apr9g2867 9 35555334 35565040 ECH