Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g2866 ATGGCTAGTGGAGAGGACTCGAACATTACTGCCTCAGCCTCTTTGCGAAATGGGGTTGGAGCTTCTTCTTCTTCTTCTTCTTCAGCCTCAGAATTGAATTTGACGGAAGAAGAAGAATCAGGAATAAGACTGGTCCACATGCTAATCTCATGCGCCCATTCTCTCCAACGTGGCAACCTCTCCCTCGCAGCTTCACTCCTTCATACCATGCAATCCATCTTCCAACACCTCACCACCGCCTCCGGCATCGGAAAAGTCGCTTCTCACTTCATCCACTCTCTAACCCTCCGAATCTACGCGCCGCCGCACAGCCAAATCCACTACCACCAAAACGACGCCGTTCTCTACCATCACTTCTACGAGGCTTCCCCTTACCTCAAGTTCGCTCACTTCACCGCCAACCAGGCAATCCTCCAAGCCTTCACCGACCACAACTGCCTCCACGTCATCGACTTCCACCTCATGCACGGCCTCCAATGGCCGCCGTTAATCCACGCTCTCGCCATCCGGCCCGGCGCTCCTCCTTCACTCCGCCTCACCGCCGTCGCTCCTCCCTCTTCGGATCACCGCGAAATCGGCTTCCGACTGGCCGACGTCGCTCGTTCCGTCAACCTCCGCTTCTCCTTCCGTGTCGTGGCGGCGTCGCGCCTCGAGGACGTGAACACGTCGATGCTGCAGGTGAACCCGAAGGAAGCGGTGGCTGTGAACTCCGTGATGCAGCTCCACCGTGTTCTCGGGTCGGAGCATAGCATCGATGCGGTGTTGGATTGGATCCGGAAAATGAACCCGAGAGTTATGACGGTAGTGGAGCAAGAAGCCAATCACAACCAGAACGGGTTTTTAGAGCGGTTCACGGAAGCGTTGTGTTATTACTCGGCTGTGTTCGACTCGCTCCAGGCTTGTCCCGTGGAGCCGGATAAGAGTCTGGGTGAGATGTACGTGCAGAGGGAGATTTGCAACGTGCTGTGCTGTGAGGGACCGGCTCGGCTTGAGAGGCACGAGCCGCTAGCTAAGTGGAAGGCTCGCCTTGGGAAAGCCGGCTTCGAGGGCGTGCATTTGGCTTCCAATGCGCTTAAGCAAGCGAGCATGCTGTTGAGCCTGTTCTCCGCAGAGGGTTACAGCGTGGAGGAGAATGAAGGTTGTTTAACGTTATGTTGGCATAACCGACCTCTGATTGCGGCTTCGGCTTGGCGAGCCGTGCAACTTGCTCACAGTGATTGTGACTAA 1227 0.5615 MASGEDSNITASASLRNGVGASSSSSSSASELNLTEEEESGIRLVHMLISCAHSLQRGNLSLAASLLHTMQSIFQHLTTASGIGKVASHFIHSLTLRIYAPPHSQIHYHQNDAVLYHHFYEASPYLKFAHFTANQAILQAFTDHNCLHVIDFHLMHGLQWPPLIHALAIRPGAPPSLRLTAVAPPSSDHREIGFRLADVARSVNLRFSFRVVAASRLEDVNTSMLQVNPKEAVAVNSVMQLHRVLGSEHSIDAVLDWIRKMNPRVMTVVEQEANHNQNGFLERFTEALCYYSAVFDSLQACPVEPDKSLGEMYVQREICNVLCCEGPARLERHEPLAKWKARLGKAGFEGVHLASNALKQASMLLSLFSAEGYSVEENEGCLTLCWHNRPLIAASAWRAVQLAHSDCD* 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g2866 408 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 30 400 IPR005202 -
Apr9g2866 408 MobiDBLite consensus disorder prediction 1 33 - -
Apr9g2866 408 Pfam GRAS domain family 44 398 IPR005202 -
Apr9g2866 408 ProSiteProfiles GRAS family profile. 35 398 IPR005202 -
Apr9g2866 408 PANTHER OS05G0574900 PROTEIN 30 400 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g2866 Apr-Chr9 35546929 35552812 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g2866 34 398 GRAS Transcription Factor Family AT1G14920 49.733 1.07e-130 384
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Apr9g2866 GRAS 2.7e-117 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g2866 K14494 - jre:109006296 509.605
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g2866 9 35546929 35552812 Apr9g2866 9 35546929 35552812 ECH