Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g2861 ATGGGTGCATGCTGTATATTAATATGTATGATAGCATCGGGGTGTTACGGCAGCGAAGCGTCGCAGTTTCCGTCAAGTAATCTGTTTGCGGCGGCGGGGGATGGAATATGGGATAACGGAGCGGCGTGTGGGAGGCAGTATATGGTGAGATGCATAAGTGCAGAGCAACCCAAAACTTGCGTTCCTGACCAAAGCATTCAGATCAAGATCGTTGATTACGCCGACACTGCGGTGTCGCCATCCTCAGCTGGCGGCACCACCATCGTTCTCTCCGACAAGGCTTTCGGGACTATTGCCAATACTTCTGCCACCTTGATCAATATTGAGTTCCAGCAGGTGTGA 342 0.5146 MGACCILICMIASGCYGSEASQFPSSNLFAAAGDGIWDNGAACGRQYMVRCISAEQPKTCVPDQSIQIKIVDYADTAVSPSSAGGTTIVLSDKAFGTIANTSATLINIEFQQV* 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g2861 113 PANTHER EG45-LIKE DOMAIN CONTAINING PROTEIN 11 113 - -
Apr9g2861 113 Pfam Lytic transglycolase 35 110 IPR009009 -
Apr9g2861 113 Gene3D - 10 113 IPR036908 -
Apr9g2861 113 SUPERFAMILY Barwin-like endoglucanases 11 113 IPR036908 -
Apr9g2861 113 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 1 113 IPR007112 -
Apr9g2861 113 PANTHER RLPA-LIKE DOUBLE-PSI BETA-BARREL DOMAIN-CONTAINING PROTEIN-RELATED 11 113 - -
Apr9g2861 113 SMART dpbb_1 30 110 IPR007112 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g2861 Apr-Chr9 35508947 35509411 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g2861 3 113 Expansin Gene Family AT3G45970 29.752 5.35e-06 41.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g2861 - - aprc:113848393 231.106
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g2861 9 35508947 35509411 Apr9g2861 9 35508947 35509411 ECH