Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g2859 ATGGTGGTGCCCATGTCCATGTGCGGTCAAGAAGAGCTTGAATTGTCAAGGGATGGAAGCCATTACAGTCTCTCTACTGGGATATTACCTTCTCTTGGAGCCAGAAGTAACCGAAGAATTAAACTCAGACCCCTCATTATAGCTCCCTATGACCGTCGTTACAGGATATGGCAAACTTTCCTTGTTACTCTGGTAGTTTACACTGCTTGGGTATCTCCCTTTGAATTCGGATTTCTTAAGAAACCACAAGCACCACTTTCCATTACTGATAATGTTGTCAATGGATTCTTTGCTGTGGATATTGTTCTCACCTTCTTTGTGGCTTACATTGACAAAACTACCTATTTGTTCGTGGATAACCCAAAACAAATTGTTTGGAAATATGCAAGAACTTGGTTGACCTTTGATGTCATCTCTATCATTCCCTCAGAGTTTATTGAAAAGATATCACCAGCTCCTCTCCAAACTTATGGGCTATTCAACATGCTTCGGCTTTGGCGTCTTAGGAGAGTCAGTGCTTTGTTTTCTCGGCTTGAGAAGGACAGAAACTATAACTATTTCTGGGTTCGGTGTGCTAAGCTTATATGTGTTACCCTCTTCGCTGTTCATTGTGCTGGATGTTTTTATTATCTTCTTGCTGCACGTTATCATGATCCCAAAAGGACTTGGATTGGGGCAACAATGGATAATTTCCTTGAACAAAGCTTGTGGACAAGATATGTGACATCAATGTACTGGTCTATTACTACTTTAACAACAGTTGGTTATGGAGATTTGCATCCAGTGAATTCAAGGGAGATGATCTTTGACATCTTTTATATGCTCTTTAATCTCGGGTTAACAGCATATCTGATTGGTAATATGACCAACTTAGTTGTCCATGGCACAAGTAGAACAAGAAAATTTAGGGATACCATACAAGCTGCCTCAAATTTTGCCCAAAGGAACCTGTTGCCTCCTCGTTTGCAAGATCAAATGCTTGCCCATTTGTGTTTGAAGTATAGAACAGACTCAGAAGGGTTGCAACAGCAGGAGACACTTGATTCTCTTCCTAAAGCCATCAGATCAAGCATTTCACATTATCTTTTTTACTCTCTAATGGATAGGGTCTACTTGTTTCATGGGGTTTCTAATGACTTGCTATTTCAATTGGTGTCAGAGATGAAAGCGGAGTATTTTCCACCCAAAGAAGATGTCATATTGCAAAATGAAGCCCCCACTGACTTCTATATACTAGTTACTGGTGCTGTGGAACTACTAGTTCGTAAAAATGGAGTTGAGCAGGTTGTTGGAGAGGCAAAAACTGGCGATCTTTGTGGTGAGATTGGTGTGCTTTGTTATAAGCCACAACTTTTCACAGTTCGAACAAAGCGATTAAGTCAGTTGCTGAGGCTGAACCGTACTACGTTCTTGAATATTGTTCAGGCCAATGTAGGAGATGGAACCATAATCATGAATAATCTCCTCCAGCATTTGAAAGATCTCAACAATCCAATCATGGAGGGAGTTTTGGTTGAAACTGAGAACATGATAGCTCGTGGTAGGATGGATCTACCTGTAAGTCTATGCTTTGCGGCAGTAAGAGGAGATGATTTGTTGTTACATCAATTGCTGAAACAGGGCTTGGATCCAAATGAATCCGACAACAATGGAAGGACAGCTTTGCATATAGCAGCATGTAAAGGAAGAGAAAACTGTGTTTTACTTCTGTTAGAATATGGGGCACATCCTAATATCAGAGATTCGGATGGCAATGTAGCACTATGGGAAGCAATAGCAGGTGGACATGAATCAGTCTGCAATGTGTTGGTAGAGAATGGCGCAAAGTTGCAAATCGGTGACGTGGGTCAATATGCATGCAGTGCGGCAGAGCAGAACAGTATCAACTTGCTCAAAGAAATAACGCGCTACGGAGGAGACATCACCCTCCCAAACAGCACCAACGGGACCACAGCGTTGCACGTGGCAGTGTCGGAAGACAACGTTGAAATTGTGAAATTGCTGTTGGATCACGGGGCTAGTATTGACAAACCAGACATGCATGGTTGGACCCCAAGAGATTTAGCAGATCAACAAGGACATGTAGAAATCAAAGCCCTTTTTGAGTCCATTGGGGAGCCTAAGCCTCGGTCTCAGTCTCAGCCTCAGCCTCAGCATCTTGTTTCCATTCCTGAGAAACATTCTCAGAATAAGTTAAGGTACCTTGGTAGATTCACAAGTGAGCCAACAATGCCTTCATTTCATGGCACTGATGGATCTTGGAGCCAAAACCGTCCAAGGCGTAGGGGCAACAACTTCCATAACTCACTCTTTGGGATAATGTCAACAAAATCCAAAGGGGAAAAGGACATGCTTTTCTCTGTTGACAATAATAACAATGCTAGGAATGGTATGAAGAGTACAGTTTGCCCCTTTAGTAGAGTTGCAATTAGTTGCCCTGAAAAGGGTGAGGTTGCTGGAAAGCTTGTTTTGCTACCTGCAAGCTTTAAAGAGTTACTTGATATTGGAGCCAAGAAATTTGGTATTAGTCCTGCTAAGGTCGTTACCAAAGATGGAGCTGAAATTGAAGATATAGAGGTAATTAGAGATGGTGACCATCTTGTTTTTGTTAGTCTTAGTGGGATGCCGGACTCCGGTTCTCCAGCAGAACCCACCAGTGGTGTGCCTCTATAG 2673 0.4231 MVVPMSMCGQEELELSRDGSHYSLSTGILPSLGARSNRRIKLRPLIIAPYDRRYRIWQTFLVTLVVYTAWVSPFEFGFLKKPQAPLSITDNVVNGFFAVDIVLTFFVAYIDKTTYLFVDNPKQIVWKYARTWLTFDVISIIPSEFIEKISPAPLQTYGLFNMLRLWRLRRVSALFSRLEKDRNYNYFWVRCAKLICVTLFAVHCAGCFYYLLAARYHDPKRTWIGATMDNFLEQSLWTRYVTSMYWSITTLTTVGYGDLHPVNSREMIFDIFYMLFNLGLTAYLIGNMTNLVVHGTSRTRKFRDTIQAASNFAQRNLLPPRLQDQMLAHLCLKYRTDSEGLQQQETLDSLPKAIRSSISHYLFYSLMDRVYLFHGVSNDLLFQLVSEMKAEYFPPKEDVILQNEAPTDFYILVTGAVELLVRKNGVEQVVGEAKTGDLCGEIGVLCYKPQLFTVRTKRLSQLLRLNRTTFLNIVQANVGDGTIIMNNLLQHLKDLNNPIMEGVLVETENMIARGRMDLPVSLCFAAVRGDDLLLHQLLKQGLDPNESDNNGRTALHIAACKGRENCVLLLLEYGAHPNIRDSDGNVALWEAIAGGHESVCNVLVENGAKLQIGDVGQYACSAAEQNSINLLKEITRYGGDITLPNSTNGTTALHVAVSEDNVEIVKLLLDHGASIDKPDMHGWTPRDLADQQGHVEIKALFESIGEPKPRSQSQPQPQHLVSIPEKHSQNKLRYLGRFTSEPTMPSFHGTDGSWSQNRPRRRGNNFHNSLFGIMSTKSKGEKDMLFSVDNNNNARNGMKSTVCPFSRVAISCPEKGEVAGKLVLLPASFKELLDIGAKKFGISPAKVVTKDGAEIEDIEVIRDGDHLVFVSLSGMPDSGSPAEPTSGVPL* 891
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g2859 890 ProSiteProfiles Ankyrin repeat profile. 550 582 IPR002110 GO:0005515
Apr9g2859 890 SUPERFAMILY Ankyrin repeat 521 705 IPR036770 -
Apr9g2859 890 CDD CAP_ED 372 477 IPR000595 -
Apr9g2859 890 ProSiteProfiles Ankyrin repeat region circular profile. 550 581 - -
Apr9g2859 890 ProSiteProfiles cAMP/cGMP binding motif profile. 372 474 IPR000595 -
Apr9g2859 890 ProSiteProfiles Ankyrin repeat region circular profile. 648 679 - -
Apr9g2859 890 PANTHER K+ TRANSPORTER 1-RELATED 7 872 - -
Apr9g2859 890 PRINTS EAG/ELK/ERG potassium channel family signature 67 74 IPR003938 GO:0005249|GO:0006813|GO:0016020
Apr9g2859 890 PRINTS EAG/ELK/ERG potassium channel family signature 90 100 IPR003938 GO:0005249|GO:0006813|GO:0016020
Apr9g2859 890 PRINTS EAG/ELK/ERG potassium channel family signature 101 110 IPR003938 GO:0005249|GO:0006813|GO:0016020
Apr9g2859 890 PRINTS EAG/ELK/ERG potassium channel family signature 240 257 IPR003938 GO:0005249|GO:0006813|GO:0016020
Apr9g2859 890 PRINTS EAG/ELK/ERG potassium channel family signature 266 277 IPR003938 GO:0005249|GO:0006813|GO:0016020
Apr9g2859 890 PRINTS EAG/ELK/ERG potassium channel family signature 284 293 IPR003938 GO:0005249|GO:0006813|GO:0016020
Apr9g2859 890 Pfam Ion transport protein 55 299 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Apr9g2859 890 ProSiteProfiles KHA domain profile. 807 887 IPR021789 -
Apr9g2859 890 MobiDBLite consensus disorder prediction 740 763 - -
Apr9g2859 890 Gene3D Jelly Rolls 336 497 IPR014710 -
Apr9g2859 890 Pfam KHA, dimerisation domain of potassium ion channel 807 869 IPR021789 -
Apr9g2859 890 SUPERFAMILY cAMP-binding domain-like 297 492 IPR018490 -
Apr9g2859 890 PRINTS Ankyrin repeat signature 551 566 IPR002110 GO:0005515
Apr9g2859 890 PRINTS Ankyrin repeat signature 664 678 IPR002110 GO:0005515
Apr9g2859 890 SMART ANK_2a 550 579 IPR002110 GO:0005515
Apr9g2859 890 SMART ANK_2a 517 546 IPR002110 GO:0005515
Apr9g2859 890 SMART ANK_2a 648 677 IPR002110 GO:0005515
Apr9g2859 890 SMART ANK_2a 583 612 IPR002110 GO:0005515
Apr9g2859 890 Gene3D - 56 293 - -
Apr9g2859 890 ProSiteProfiles Ankyrin repeat profile. 648 680 IPR002110 GO:0005515
Apr9g2859 890 MobiDBLite consensus disorder prediction 743 763 - -
Apr9g2859 890 SMART cnmp_10 372 489 IPR000595 -
Apr9g2859 890 MobiDBLite consensus disorder prediction 707 725 - -
Apr9g2859 890 SUPERFAMILY Voltage-gated potassium channels 49 293 - -
Apr9g2859 890 PANTHER POTASSIUM CHANNEL AKT1 7 872 IPR045319 GO:0005249|GO:0006813
Apr9g2859 890 MobiDBLite consensus disorder prediction 705 726 - -
Apr9g2859 890 Gene3D - 518 703 IPR036770 -
Apr9g2859 890 Pfam Cyclic nucleotide-binding domain 392 476 IPR000595 -
Apr9g2859 890 ProSiteProfiles Ankyrin repeat profile. 583 615 IPR002110 GO:0005515
Apr9g2859 890 Pfam Ankyrin repeats (3 copies) 622 697 IPR002110 GO:0005515
Apr9g2859 890 Pfam Ankyrin repeats (3 copies) 523 612 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g2859 Apr-Chr9 35491379 35497780 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g2859 15 869 Ion Channels AT2G25600 63.488 0.0 1105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g2859 K21867 - gmx:100819491 1473.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g2859 9 35491379 35497780 Apr9g2859 9 35491379 35497780 ECH