Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g2853 ATGGAGGATAGAAAAGTTAACACAATCGCTGTTATATCAGTGATTGCACTGATCATTGTCATCATAGCTGCTCGTGTCTCGTTGAAGCTCTCAAGGGCTTTCTTCCTTATTTGTGGTGCTGCTATTGCTGTGATCCTCGCTGTTTTTTCTTGTCTATTCATAAGACAACGTTACAACCGCAGAAGGCGGTTGTTGGAGTCGCAGTTGAGGTCAGAAGGGAGAGAGCTTCGAATAGAGTACAGTTTCTTAAGGAAAATTGCCGGTGTTCCAACCAAATTTCGGTACAAGGAGCTTGAAGAAGCAACGGATGGTTTTCAAGCACTTCTGGGAAGAGGGTCTTCTGCTTCGGTTTTCAAAGGCATTCTCAATGATGGTACTTCAGTAGCTGTGAAACGAATCGATGGAGAGGAACGTGGAGAGAGGGAGTTCAGATCAGAAGTTGCAGCCATTGCTAGTGTGCAACATGTGAACCTTGTACGCTTATTTGGGTACTGTAATGCTCCTACGGCTCCTAGGTACCTTGTTTATGAGTATATTCCAAATGGGTCTTTGGATTGTTGGATCTTTCCCGCAAGGGAAACACATGCACGTCGTGGTGGATGTTTGACATGGTACTTGAGGTATAGAGTTGCCATTGATGTTGCTAAAGGATTGTCTTATCTTCACCATGATTGTAGGTCAAGGGTTTTACACCTTGATGTGAAGCCAGAGAATATTCTTCTTGATGAGGATTATAAAGCTCTTGTTTCAGATTTTGGTCTCTCGACGCTTGTTGGCAAGGATGTAAGCCAAGTTATGACAACAATAAGGGGAACAAGAGGGTATTTGGCCCCTGAATGGCTATTGGAAAGGGGGGTTTCAGAGAAAACTGACATATATAGTTATGGGATGGTTTTATTGGAGATAATTGGAGGGAGAAGAAATGTTTCCAGGGTGGAAGATCCGAGGGACATGACTAAGAAAAAGTGGCAGTTTTTCCCAAAGATTGTTAATGAGAAAGTGCGAGAAGGGAAGTTCATGGAAATTGTGGACCATAGGCTAGTGGAGCGTGGGGGTGTTGATGAGAGTGAGGTTATTAAATTGGTGTATATTGCCTTGTGGTGCATACAAGAGAAGCCAAGATTGAGGCCTAGCATGGCACAGGTGGTTGATATGCTTGAAGGGCGTGTGAGGGTGGATGAACCCCCAGATTCCAGAATGATTCTTGTTGATTTATTGTCTGTGGATGAAGACCATGCAGATCAAAACAATTTGGTAAGGTTATTGACCTCTATGTCAAGCCATGTGGATTATGCATCTACCTACTCTTTGGAAACCACTATTTTATCTGGCAGATAG 1338 0.4335 MEDRKVNTIAVISVIALIIVIIAARVSLKLSRAFFLICGAAIAVILAVFSCLFIRQRYNRRRRLLESQLRSEGRELRIEYSFLRKIAGVPTKFRYKELEEATDGFQALLGRGSSASVFKGILNDGTSVAVKRIDGEERGEREFRSEVAAIASVQHVNLVRLFGYCNAPTAPRYLVYEYIPNGSLDCWIFPARETHARRGGCLTWYLRYRVAIDVAKGLSYLHHDCRSRVLHLDVKPENILLDEDYKALVSDFGLSTLVGKDVSQVMTTIRGTRGYLAPEWLLERGVSEKTDIYSYGMVLLEIIGGRRNVSRVEDPRDMTKKKWQFFPKIVNEKVREGKFMEIVDHRLVERGGVDESEVIKLVYIALWCIQEKPRLRPSMAQVVDMLEGRVRVDEPPDSRMILVDLLSVDEDHADQNNLVRLLTSMSSHVDYASTYSLETTILSGR* 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g2853 445 SUPERFAMILY Protein kinase-like (PK-like) 85 387 IPR011009 -
Apr9g2853 445 Gene3D Phosphorylase Kinase; domain 1 69 178 - -
Apr9g2853 445 PANTHER RECEPTOR-LIKE KINASE 1 445 - -
Apr9g2853 445 Pfam Protein kinase domain 108 384 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr9g2853 445 ProSiteProfiles Protein kinase domain profile. 103 390 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr9g2853 445 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 1 445 - -
Apr9g2853 445 Coils Coil 55 75 - -
Apr9g2853 445 ProSitePatterns Protein kinases ATP-binding region signature. 109 131 IPR017441 GO:0005524
Apr9g2853 445 Gene3D Transferase(Phosphotransferase) domain 1 179 399 - -
Apr9g2853 445 SMART serkin_6 103 386 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr9g2853 445 ProSitePatterns Serine/Threonine protein kinases active-site signature. 229 241 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g2853 Apr-Chr9 35403755 35405144 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g2853 1 398 Receptor kinase-like Gene Family AT5G20050 67.332 0.0 528
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Apr9g2853 Pkinase 4.9e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g2853 - - gmx:100779485 737.643
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g2853 9 35403755 35405144 Apr9g2853 9 35403755 35405144 ECH