Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g2848 ATGGCTGCCACCATCATAACCACCGCAACCACCACACCCTGCAGAGACGAACCCGACTACGACAGCAGCTCCTCGTCGATCACCGTGCCGGAATCAAGCCGGAGCTGGATGACAAACCTCAGCTTTGGTAGCCGCCGGCGCCGGAGCTCCGTCTCCGTTTGTTCCTCCACCACAGACACGTCTTCGTTCCTGGGTTCACACGCCAAGCCCCACAAGGCCAACCAAGCTGCATGGGAGGCCATGCGGCGGCTCCGCCGCGACAAGGGGCAGGTTGGCCTCGACCACTTCAGGCTCCTGCGGCGGCTCGGAAGCGGTGACATAGGGAACGTTTACCTTTGCCAGATAAGGAACCCTCTTGTGGGGTTGCCACAGTGCTTCTATGCCATGAAAGTTGTGGACAGAGAAGCACTTTCTATAAGGAAGAAACTACAGAGAGCAGAGATGGAGAAGGAGATTTTAGCCATGCTTGATCACCCTTTCTTGCCCACTTTGTACACTGAGTTCGACGCTTCTCATTATTCTTGCTTGGTCATGGAGTTTTGTCCCGGTGGTGACTTGTATGCTGCTCGCCAACGCCAACCTGGGAAGCGGTTTTCCATATCATCCACTAAGTTTTATGCAGCTGAGACACTCTTGGCATTAGAGTATCTTCACATGATGGGCATAGTGTATAGGGATTTGAAGCCAGAGAATGTGCTTGTGAGAGAGGATGGACACATTATGCTTTCAGATTTTGATCTTTCACTGAAATGTGACGTTGTTCCGAAGCTGTTAAAGAGTAAGACTAGATTGGAACGCAGTATCAAGAGTACAAAGAGATCTGCACCTGCCTGCACTGCCCCCATGCAGCCTGTGCTATCTTGTTTCTCAGCATCAAGCAAGAAAAAGAAACCCACTGTAACAACGGTTATAAGGGAAAATGTTGAAGTTCAAGAACTTGATCCGGAGCTGGTGGCAGAACCAATTGATGCTAAGTCAAAGTCATTTGTAGGGACACATGAGTACTTGGCACCAGAAGTTATTTTGGGACAAGGACATGGGAGTGCAGTGGATTGGTGGACATTTGGGGTGTTCTTGTATGAGATGTTATATGGGAGGACACCTTTCAAAGGTGAAAATAATGAGAAAACTCTTGTAAACATTTTGAAGCAACCATTGGCTTTCCCTAGAATTGCAGTGAGTAGCAGCAAGGAGTTTGAAGAGATGGTGAAAGTTCAAGACCTTATAAGCAAGCTGTTAGTGAAGAATCCAAATAAGAGAATTGGAAGCTGCATGGGTTCTGTTGAGATCAAAAGACATGAGTTCTTCAAGGGTGTAAATTGGGCTTTGATTAGATCAGTTAGGCCCCCTGAGGTCCCTACTGATATGAACAAGATTAGGAGTAGGGTTTTGGTACCAAAACTAAGCAAGACAGACAGGGATCAGCCGTATCAGCTTAGTGCTCATCATTTTGAATACTTCTAA 1464 0.4768 MAATIITTATTTPCRDEPDYDSSSSSITVPESSRSWMTNLSFGSRRRRSSVSVCSSTTDTSSFLGSHAKPHKANQAAWEAMRRLRRDKGQVGLDHFRLLRRLGSGDIGNVYLCQIRNPLVGLPQCFYAMKVVDREALSIRKKLQRAEMEKEILAMLDHPFLPTLYTEFDASHYSCLVMEFCPGGDLYAARQRQPGKRFSISSTKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSLKCDVVPKLLKSKTRLERSIKSTKRSAPACTAPMQPVLSCFSASSKKKKPTVTTVIRENVEVQELDPELVAEPIDAKSKSFVGTHEYLAPEVILGQGHGSAVDWWTFGVFLYEMLYGRTPFKGENNEKTLVNILKQPLAFPRIAVSSSKEFEEMVKVQDLISKLLVKNPNKRIGSCMGSVEIKRHEFFKGVNWALIRSVRPPEVPTDMNKIRSRVLVPKLSKTDRDQPYQLSAHHFEYF* 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g2848 487 Gene3D Transferase(Phosphotransferase) domain 1 181 250 - -
Apr9g2848 487 Gene3D Transferase(Phosphotransferase) domain 1 323 454 - -
Apr9g2848 487 Gene3D Phosphorylase Kinase; domain 1 94 180 - -
Apr9g2848 487 Pfam Protein kinase domain 97 251 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr9g2848 487 Pfam Protein kinase domain 325 436 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr9g2848 487 ProSiteProfiles Protein kinase domain profile. 96 436 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr9g2848 487 MobiDBLite consensus disorder prediction 1 28 - -
Apr9g2848 487 SUPERFAMILY Protein kinase-like (PK-like) 80 462 IPR011009 -
Apr9g2848 487 SMART serkin_6 96 436 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr9g2848 487 Coils Coil 129 149 - -
Apr9g2848 487 ProSitePatterns Serine/Threonine protein kinases active-site signature. 222 234 IPR008271 GO:0004672|GO:0006468
Apr9g2848 487 PANTHER FLIPPASE KINASE 1-RELATED 14 487 - -
Apr9g2848 487 PANTHER PROTEIN KINASE PINOID 2 14 487 - -
Apr9g2848 487 CDD STKc_phototropin_like 94 454 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g2848 Apr-Chr9 35373454 35375247 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g2848 16 487 AGC Kinase Gene Family AT2G26700 59.091 0.0 583
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Apr9g2848 Pkinase 9.4e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g2848 K08286 - gmx:100777988 857.825
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g2848 9 35373454 35375247 Apr9g2848 9 35373454 35375247 ECH