Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g2822 ATGGTCTCATGGATCCCTACCACCACTTTCGTGTTGTTCATGTCTTTAGTATCATATTCAAGTACGAGAGCTCAAACACAACCACCCAAGAATATAGAACCTGGTTCCACACTGATCGCAAATGATCCTCACCACACTCTCTGGTATTCTCCTTCGGGTCAGTTTGCATTTGGCTTTTCTCCACAACAGCAAAGCAATGGTTTTATCATTGCAATTTGGTTGGCTGCAATTGGGAGCAAGACAGTGGTATGGACTGCAAATCGGAATGATCCTCCTGTCAGTTCAAATGCAAAGCTACAACTAACCAAGGATGGTAAACTTGTGCTAACAAATGAACAAGGACAAGAGAAGGTTATTGCACCTAATGGTAGTGCAAAAGCTTCCTTTGCCTCCATGCTTGATTCTGGAAACTTTGTACTGTACAATAATGATTCTAAGTCCAGCATCATATGGCAAAGTTTCGATTACCCAACTGATACTTTGTTAGGGGGTCAATCTCTTTCTAATGGACATGAACTGGTCTCTAGTTCATCCCATGATAGCTACTCATTTGGACGGTTTCGTCTCAAGATGCAAGATGATGGAAATCTTGTTCTATATCCAGTAAACTCAACTGACACGGGAGTAGATGCTTATTGGGCCTCTAATGTTTTCAATATTGGTTTCAAAAGTCATCTTTATCTCAACAAAACAGGTTTACTTCAGATTATGAACAGCAGTGATTCGACTGTTATAATGAGTCTTGACACTGATTCATCTTTGACTAACCCCATAAAAAATGGGGACGAGAACCAGATAATTTATCGGGCAACTTTGGATGTTGATGGGGTTTTTCGGCTGTATGCTCATTCCAACAATGGCTTCCATATTGTTAAAAGTTGGCCGGGTGGCGATGCATGTTCACTGAAGGGTATTTGTGGCTTCAACAGCTACTGCACATTCGATGAAGTTCAATCCGTGTGTAATTGCCTTCCAGGTTTTGACTTAATAGATCCAGCTGAAGACACCAAAGGTTGCAAGAGGAACTTTTCAAAAATCAGGTGTGCAAGTGAGAAAGATAGTTTAGCTTATTACAACATGATCTCGATAAGGAATGTTACGTGGGAGAATCATCCTTATTTCGTGGCTAAAATGTCACAGGAACAAGAATGTTCCTTAGCTTGTTTAGCTGATTGCAACTGTTGGGCTGCAATTTATCAGCAAGGAAGCTGCGAGAAACAAGGGTTGCCTTTGAGGTATATTAGAATGACAAGGGACAATGAACCGGGAACCGTGGTGTTCTTGAAGGTTGGAAACAAAAGCCTGAAGGGAAATGGTAATTCTGTGCCTGAACCACCACCTCCACCTCTAATCAAGACTACAAGTAACAAAGCAACAATAGAGATCATTGTCATCACATCCCTATTTAGTATGCTTTTATGTTTAGCCATTGCAATCTCTTGTCATTACATGTATAAGATTCGAGTCTTAAGGTACCAAAGGTTGATGGAGACTGGGAACTTGGGCCTTAACGAAGAGGTGACTTTGAGAAGGTTTTCATACAATGAGCTGAAAAGAGCAACCAATAATTTCAAACAAGAGTTGGGTAAAGGTTCTTTTGGAGCAGTTTACAAAGGGTCTTTGTACAAAGGCAAGAGATTGATTGCGGTGAAGAGGCTAGAGAAGTTAGTAGAAGAAGGTGAGAGGGAGTTTCAAGCAGAAATGAGAGCCATTGGAAAAACCCACCACAAGAACCTAGTTCACTTGCTAGGTTATTGTGTCGAAGGTTCAAGAAGGCTTCTGGTTTATGAATACATGACCAACGATTCTCTTGGAAAACTAATCTTTGGGGTTGAAAGACATTTAGATTTGGACGAAAGAGTAAGAATAGCATTGGAGATTGCAAGAGGGCTCCTCTATCTCCATGAAGAGTGTGAGGCACCAATCATTCATTGTGACATAAAGCCTCAAAACATTTTGATGGATGAGTTCTGGACTGCTAAGATATCTGACTTTGGGCTAGGAAAACTTCTAATGCCAGATCAAACTAGAACATTCACAGGGGTAAGAGGGACCAGAGGGTACTTGGCCCCAGAATGGCACAAGAACACCCCAATATCAGTGAAGGCTGATGTTTATAGCTATGGAATTGTGCTGCTGGAAATTTTATGCTGCAGAAGAAACATTGAAGTTAATGTCTCGAAAACTGAGGAGGTTTTGCTTTACGATTGGGCATACAAGTGTTTTGTTGCTGGACAGTTAAACAAGCTTGTTCTTTGGGAAGCCATGGATAAGAAAATCCTAGAAAATATGGTTAAGGTGGCACTTTGGTGTATCCAAGATGAACCTGTTCTGCGTCCAACTATGAAAAGTGTAGTTTTGATGTTAGAAGGGATTAGCGATGTAGCAATTCCGCCTTACCCAAATTCCAATTATATGTGA 2421 0.4089 MVSWIPTTTFVLFMSLVSYSSTRAQTQPPKNIEPGSTLIANDPHHTLWYSPSGQFAFGFSPQQQSNGFIIAIWLAAIGSKTVVWTANRNDPPVSSNAKLQLTKDGKLVLTNEQGQEKVIAPNGSAKASFASMLDSGNFVLYNNDSKSSIIWQSFDYPTDTLLGGQSLSNGHELVSSSSHDSYSFGRFRLKMQDDGNLVLYPVNSTDTGVDAYWASNVFNIGFKSHLYLNKTGLLQIMNSSDSTVIMSLDTDSSLTNPIKNGDENQIIYRATLDVDGVFRLYAHSNNGFHIVKSWPGGDACSLKGICGFNSYCTFDEVQSVCNCLPGFDLIDPAEDTKGCKRNFSKIRCASEKDSLAYYNMISIRNVTWENHPYFVAKMSQEQECSLACLADCNCWAAIYQQGSCEKQGLPLRYIRMTRDNEPGTVVFLKVGNKSLKGNGNSVPEPPPPPLIKTTSNKATIEIIVITSLFSMLLCLAIAISCHYMYKIRVLRYQRLMETGNLGLNEEVTLRRFSYNELKRATNNFKQELGKGSFGAVYKGSLYKGKRLIAVKRLEKLVEEGEREFQAEMRAIGKTHHKNLVHLLGYCVEGSRRLLVYEYMTNDSLGKLIFGVERHLDLDERVRIALEIARGLLYLHEECEAPIIHCDIKPQNILMDEFWTAKISDFGLGKLLMPDQTRTFTGVRGTRGYLAPEWHKNTPISVKADVYSYGIVLLEILCCRRNIEVNVSKTEEVLLYDWAYKCFVAGQLNKLVLWEAMDKKILENMVKVALWCIQDEPVLRPTMKSVVLMLEGISDVAIPPYPNSNYM* 807
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g2822 806 ProSiteProfiles Bulb-type lectin domain profile. 158 293 IPR001480 -
Apr9g2822 806 Pfam Protein kinase domain 524 786 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr9g2822 806 ProSiteProfiles Protein kinase domain profile. 522 792 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr9g2822 806 SUPERFAMILY Protein kinase-like (PK-like) 506 790 IPR011009 -
Apr9g2822 806 SUPERFAMILY alpha-D-mannose-specific plant lectins 82 171 IPR036426 -
Apr9g2822 806 PIRSF SRK 2 806 IPR024171 GO:0004674
Apr9g2822 806 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE LECRK1 27 803 - -
Apr9g2822 806 Gene3D Phosphorylase Kinase; domain 1 490 598 - -
Apr9g2822 806 ProSitePatterns Protein kinases ATP-binding region signature. 528 551 IPR017441 GO:0005524
Apr9g2822 806 ProSitePatterns Serine/Threonine protein kinases active-site signature. 642 654 IPR008271 GO:0004672|GO:0006468
Apr9g2822 806 Coils Coil 550 570 - -
Apr9g2822 806 Pfam D-mannose binding lectin 81 168 IPR001480 -
Apr9g2822 806 Gene3D Transferase(Phosphotransferase) domain 1 599 797 - -
Apr9g2822 806 SMART serkin_6 522 789 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr9g2822 806 PANTHER RUST RESISTANCE KINASE LR10-RELATED 27 803 IPR045874 GO:0004672
Apr9g2822 806 CDD B_lectin 46 157 IPR001480 -
Apr9g2822 806 Gene3D - 158 293 IPR036426 -
Apr9g2822 806 ProSiteProfiles Bulb-type lectin domain profile. 23 153 IPR001480 -
Apr9g2822 806 SUPERFAMILY alpha-D-mannose-specific plant lectins 179 281 IPR036426 -
Apr9g2822 806 SMART blect_4 35 157 IPR001480 -
Apr9g2822 806 Gene3D - 27 155 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g2822 Apr-Chr9 35202112 35204628 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g2822 476 798 Receptor kinase-like Gene Family AT1G53430 43.988 2.62e-66 236
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Apr9g2822 Pkinase 5.5e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g2822 - - gmx:100815958 1035.4