Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g2821 ATGGCTTCCAAACCTGTTATGTTCTCACTGTTCTTCTTCTTCATCATGTTCTTTGCAAAAGAAGGCTCAACTGAAAGCAAAATTGAGTTGGGGTCTAGGCTCTCTCCTGAAGGCAGCCATAACAATTCATGGGCATCAAGTTCTGGCCATTTTGCTTTTGGCTTTTACCCACAAGGCAACGGTTTTGCTGTTGGAATATGGCTAGTTAGTACACCCGAAAGTGAAGACATTATTGTGTGGACTGCCAACCGTGATAGCCCCACAATCTCCAAAAATTCTACGTTGCTTTTGACAAATACTGGCTTGCGGTTTTTACAAAGTGGGAAAGAAGGACAATATCTCATTTCAGACTTCACATTAGTAGCTTCGGCATCTATGCTTGATTCTGGCAACTTTGTGCTCTATGGTGACAACCATACTATTATTTGGCAGAGCTTTGATCACCCAACAGACACCATATTAGGAGGTCAGAATTTAACTGAAAATGCTGAACTGGTCTCTAGTATCTCCAATTCAGACCATTCTAGTGGACGTTTCTTTCTCAGCATGCAAGGAGATGGAAACCTCGTTGCTTACCCTGATATTGGCTTAGGAGATTCAAATGATGCTTATTGGGCTTCAAATACTCGTGTACCAGATTACCAAAGGCTCAGTCTTACCCGCTCGGGCTCTCTTTGCCTCATTGGAGATTACCTTTCATGTTTTAATGGTAGCTACCCTGGAATTAAGTCACACAACACAAGTTCATTTATCTATCTCGCAAAACTTGATGTAGACGGTAATTTGAGATTGTATGAGCACCAATTGGAGAGCAATAGTATCTCACACGTACAAGTGTTGTGGAAAGCCTTGTCGGATGAATGCATGATCAAGGGGTTTTGTGGCTTGAACAGTTACTGCTCAAACGTAGCAGGCAATGCTGTGTGTGAGTGTTATCCTGGTTTCGTGTCCAAAAGTAGTGTGAACATGTTTCTGGACTGCGTGCGGAACGATAGCATGGATGATTGTGAACGTAGTAGAGATCCCTCCAAGTTTTTCAATGTTACTTTCCTGAAAGGTATGTCTTGGGGTGATAGACCCTATTCGGTTATACCAATGAAGAGGGAAACTTGTGAGAAGTCTTTGCTGGAAGATTGTGATTGCAAGGCAGTGTTATATTCTGAGGGAAACTGCAAAAAATATAGGCTTCCCCTTATATATGGCAGCTGGATTCAAGGTCAAGATCCACCAACCGTGGCTTTCTTAAAGATGCCTTCAGAAGATGTCATTAAGGAGAAGAAGTCGATGGTCGTTGTTGATAACAAGAGAAATCTGATAATGATTCTAGCCCTTACTTTGGGTAGCATTTCATTGTTAAGTTTGGTTTTTGCGGCGTCTATTTGCATTACTTATAGGCGCCAAGTTTATAGATATACAAAGTTGTTGTCTTCATGCGAGGATCTGCGATTTACGGAAGAATGTTCTTTGCGTTCATTTTCTTTTGATGAACTTGAGAGATTAACTCGAGGCTTCACGGAAGAGATAGGTAGAGGATCATATGGAGCAGTTTATAGAGGTACAATCGGTGATAGTAACAGAAGCATTGCTGTGAAGAGACTTGAGAGAATTGCTGATGAAGGGGAGAGGGGATTCCGAGCTGAAATCACTGCCATTGCTCGAACACATCATAGGAATTTGGTTAAGCTCATTGGTTTTTGCATTGAAGGATCAAGGAAGCTTCTTGTTTATGAATATGTCAGCAATGGGTCCCTTGCAAATCTTCTGTTCAAAGGAGAGAAGCGTTTATCATGGGGAGAGAGACTAAAAATTGCATTGGATGTGGCTAGAGGAGTACTATATCTACATGAGGAGTGTGATGTTGGTATTATCCACTGCAATATAAAGCCTAGAAATATACTTATGGATGAAGCATGGGTGGCAAAGATATCTGATTTTGGATTGGCAAGGCTATTAAAGCCAGAATATTCAAGAATGAATAAAGAGGATGATGGGATGAGCAAGTATTTGGCACCTGAATGGAAGAAGGACGCAGCAGTATCAGTAAAATGGGATATTTACAGTTATGGCATGGTACTATTGGAGATTGTGTGCCGCAGAAGCAGCATAGATATAGATGTTTCCTCAGCTGAGGAGATACTTCTTTCTAGCTGGGTATATCAATGCTTTGAATCAGGGGAGTTAAATAAGCTTGTTAAAGATGATGGAGGTGAAGTTGTAGAGTGGAAGTTATTGGAAAGAATGGTGAAGGTGGGACTGTGGTGTGTGCAAGATGACCCATTTCTTCGTCCTTCAATCAAGAATCTCATCTTGATGTTAGAAGGATTGAAAGATATTCCAAATCCTCCCTCTCCACCACATTTGCTTAAATAA 2370 0.4118 MASKPVMFSLFFFFIMFFAKEGSTESKIELGSRLSPEGSHNNSWASSSGHFAFGFYPQGNGFAVGIWLVSTPESEDIIVWTANRDSPTISKNSTLLLTNTGLRFLQSGKEGQYLISDFTLVASASMLDSGNFVLYGDNHTIIWQSFDHPTDTILGGQNLTENAELVSSISNSDHSSGRFFLSMQGDGNLVAYPDIGLGDSNDAYWASNTRVPDYQRLSLTRSGSLCLIGDYLSCFNGSYPGIKSHNTSSFIYLAKLDVDGNLRLYEHQLESNSISHVQVLWKALSDECMIKGFCGLNSYCSNVAGNAVCECYPGFVSKSSVNMFLDCVRNDSMDDCERSRDPSKFFNVTFLKGMSWGDRPYSVIPMKRETCEKSLLEDCDCKAVLYSEGNCKKYRLPLIYGSWIQGQDPPTVAFLKMPSEDVIKEKKSMVVVDNKRNLIMILALTLGSISLLSLVFAASICITYRRQVYRYTKLLSSCEDLRFTEECSLRSFSFDELERLTRGFTEEIGRGSYGAVYRGTIGDSNRSIAVKRLERIADEGERGFRAEITAIARTHHRNLVKLIGFCIEGSRKLLVYEYVSNGSLANLLFKGEKRLSWGERLKIALDVARGVLYLHEECDVGIIHCNIKPRNILMDEAWVAKISDFGLARLLKPEYSRMNKEDDGMSKYLAPEWKKDAAVSVKWDIYSYGMVLLEIVCRRSSIDIDVSSAEEILLSSWVYQCFESGELNKLVKDDGGEVVEWKLLERMVKVGLWCVQDDPFLRPSIKNLILMLEGLKDIPNPPSPPHLLK* 790
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g2821 789 PANTHER S-RECEPTOR KINASE-LIKE PROTEIN 4 786 - -
Apr9g2821 789 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 4 786 - -
Apr9g2821 789 Pfam D-mannose binding lectin 78 163 IPR001480 -
Apr9g2821 789 Gene3D - 150 285 IPR036426 -
Apr9g2821 789 SUPERFAMILY alpha-D-mannose-specific plant lectins 174 266 IPR036426 -
Apr9g2821 789 Gene3D Phosphorylase Kinase; domain 1 488 578 - -
Apr9g2821 789 SUPERFAMILY Protein kinase-like (PK-like) 486 774 IPR011009 -
Apr9g2821 789 ProSiteProfiles Bulb-type lectin domain profile. 150 277 IPR001480 -
Apr9g2821 789 Gene3D Transferase(Phosphotransferase) domain 1 579 780 - -
Apr9g2821 789 Gene3D - 25 147 IPR036426 -
Apr9g2821 789 PIRSF SRK 1 789 IPR024171 GO:0004674
Apr9g2821 789 Pfam Protein tyrosine and serine/threonine kinase 504 769 IPR001245 GO:0004672|GO:0006468
Apr9g2821 789 SUPERFAMILY alpha-D-mannose-specific plant lectins 77 192 IPR036426 -
Apr9g2821 789 SUPERFAMILY EGF/Laminin 286 319 - -
Apr9g2821 789 SMART blect_4 35 149 IPR001480 -
Apr9g2821 789 ProSitePatterns Protein kinases ATP-binding region signature. 508 531 IPR017441 GO:0005524
Apr9g2821 789 CDD EGF_CA 286 319 - -
Apr9g2821 789 ProSiteProfiles Bulb-type lectin domain profile. 31 147 IPR001480 -
Apr9g2821 789 ProSiteProfiles Protein kinase domain profile. 502 775 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g2821 Apr-Chr9 35196003 35198552 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g2821 447 784 Receptor kinase-like Gene Family AT4G18250 37.644 1.79e-62 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Apr9g2821 PK_Tyr_Ser-Thr 1.5e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g2821 - - cam:101496142 937.947