Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g2820 ATGGATACCATTGTCACAACTATCATCTTGTTGATGCTCATGTTTGCAAGTACAAGAGCTCAAACACAACCACCAAAGCAGCATATAGCACTAGGAACCACACTATTCCCAAACAGTACTCATTCTTCTTTTTGGCCTTCCCCTTTAGGTCAATTTGCATTTGGTTTTTATCCGGAAGCACAAGGCACTGGCTTTGTTGTTGCAATTTGGTTGGTTAGTGGAAAGAGCAAGACAGTGGTGTGGACTGCAAACAGGAATGATCCTGCAGTCACCTCAAATGCAAAGCTACAATTAACCATGGACGGGAAACTTGTGCTAAAATATGAGCAAGGACAAGCGAAGGTGATAGCAGTTAATACTAATAACGCAAAAGCCTCCTTTGCCTGCATGCTTGATTCTGGAAACTTTGTACTATACGACAAGAACTCCAGCATCATATGGCAGACTTTTGATTTCCCAACTGATACATTGTTAGGGGGTCAAAGTCTATTCGGTGAAAGTCAACTGGTGTCGAGTTCATCAGAGATGAAGCCTTCAAGTGGACGGTTTCGTCTCAAGATACATGATGGAGCTCTTGGACTGTATCCAGTTAACACAAGTGATTTACAATGGGACGCTTATTGGACCTCCACCTCCACCTCCACGCCCTCAAGTAGTTCTAAAATTTATCTTTACCTCAACCAAACAGGGCAATTGGAGCTCAAAAATGTCAGTGATTTTACAGTTGAGTGGCTTTTAAGTCATTCATCTTTATATGGAAATGAGGAGCAGATCATTTATCGTGCAACCCTGGATCCTGATGGGATTTTTCGGCTCTATGTGCATTTTAACAACGGCACTGTACAAGAAGTTGAAAGATGGCCGGGAGATGAGAAAGCATGTGGAGTAAAGGGTTTTTGTGGTTTCAACAGCTACTGCACAGTTGATGATGAACATCCTGTGTGCAACTGTCTTGATGGTTTTGAGTTTATAGATCCAAATGAACGTACTCTTGGATGCAAAAGTACCTTTGAAAGAGAAGAGTGCAGATGGGAGAAAGATGGTGCAGCTGCAACCTTATATAACATGACCCTGATGAAGAATCTTGTAGGGGAGGATCGTGTTTATTTCATGGCTAAAATGTCTCAAGAAGACGACTGCACCTCTGCTTGTTTATTTGATTGCAACTGTTGGGCTTCATTGTATGACTCCCAGGCTAGAAATTGCAAGAAACTATGGGTACCTTTGAGATATGTCAGAAGAAAACAAAGTAGTGACCCTGAAACCTCGCTATTCTTAAAGGTGGGACTGGGAAACAAAAAGCTCAGTGGTTATCCTGGGCCTGAACAACCACCTCAGCCTCTAATCACGACTACAAGTAACAAAGCAACAGTGCAAATTATTGTCATTACATCCGTATTTGCTCTACTCTTATGTTTATCCATTGCAATCTCCAGCCATTACATGTACAAAATTCGAGTGTTAAGGTACAAGAGGCTGGTGGAGACTGGTAACTTGGGTCTTAATGAAGAGGTGACTTTGAGAAGGTTTTCATACAGTGAGCTGAAAAAAGCAACAAACCATTTCAAACAAGGGTTGGGTAAAGGTTCTTTTGGAGCAGTTTACAAAGGGGCTTTGTCAAAAGGAAAGAGATCAATTGCAGTGAAAAGACTAGAGAAGTTGGTGGAAGAAGGAGAAAGGGAGTTTCAAGCAGAAATGCGAGTCATTGGAAAAACCCACCACAGGAATCTTGTTCGGTTGTTGGGGTTTTGTGCTGAAGGTTCTAAAAGGCTTTTGGTTTATGAATACATGACCAATGGTTCACTTGAAAAGCTTATCTTCGGTGCTACGAGACGTCTAGACTGGGATGAGAGGGTAAGAATAGCAGTGGATGTTGCAAGAGGGATCCTCTATCTCCATGAAGAGTGTGAGGCACCCATCATTCATTGTGACATAAAGCCTCAAAACATTTTGATGGATGAGTTGTGGACTGCCAAGATATCAGATTTTGGCCTAGCGAAACTTCTAATGCCAGATCAAACCAGAACCTTCACTGGGGTTAGAGGGACAAGAGGGTATGTGGCTCCAGAATGGCACAAAAATACCCCAATATCGGTGAAAGCAGATATTTATAGTTATGGAATAGAGCTGTTGGAAATTCTGTGTTGCAGAAGAAACATTGAAGTTACTGTCTCGGAACCTGAGGAGGTTCTGCTTTCTGGTTGGGCTTATAAGTGTTTTGTTGCTCGACAGTTAAACAAGCTTGTTCCTTGGGAAGCTGTGGATAAAAATGTCTTCGAAAATATGGTTAAGGTGGCACTTTGGTGTATCCAAGACGAACCTTTTCTGCGGCCATCCATGAAAAGTGTGGTTTTGATGTTAGAAGGGATTACCGATGTAGCAATTCCTCCTTGCCCAGATTCCAATTCTGTGTGA 2415 0.4215 MDTIVTTIILLMLMFASTRAQTQPPKQHIALGTTLFPNSTHSSFWPSPLGQFAFGFYPEAQGTGFVVAIWLVSGKSKTVVWTANRNDPAVTSNAKLQLTMDGKLVLKYEQGQAKVIAVNTNNAKASFACMLDSGNFVLYDKNSSIIWQTFDFPTDTLLGGQSLFGESQLVSSSSEMKPSSGRFRLKIHDGALGLYPVNTSDLQWDAYWTSTSTSTPSSSSKIYLYLNQTGQLELKNVSDFTVEWLLSHSSLYGNEEQIIYRATLDPDGIFRLYVHFNNGTVQEVERWPGDEKACGVKGFCGFNSYCTVDDEHPVCNCLDGFEFIDPNERTLGCKSTFEREECRWEKDGAAATLYNMTLMKNLVGEDRVYFMAKMSQEDDCTSACLFDCNCWASLYDSQARNCKKLWVPLRYVRRKQSSDPETSLFLKVGLGNKKLSGYPGPEQPPQPLITTTSNKATVQIIVITSVFALLLCLSIAISSHYMYKIRVLRYKRLVETGNLGLNEEVTLRRFSYSELKKATNHFKQGLGKGSFGAVYKGALSKGKRSIAVKRLEKLVEEGEREFQAEMRVIGKTHHRNLVRLLGFCAEGSKRLLVYEYMTNGSLEKLIFGATRRLDWDERVRIAVDVARGILYLHEECEAPIIHCDIKPQNILMDELWTAKISDFGLAKLLMPDQTRTFTGVRGTRGYVAPEWHKNTPISVKADIYSYGIELLEILCCRRNIEVTVSEPEEVLLSGWAYKCFVARQLNKLVPWEAVDKNVFENMVKVALWCIQDEPFLRPSMKSVVLMLEGITDVAIPPCPDSNSV* 805
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g2820 804 ProSiteProfiles Bulb-type lectin domain profile. 154 285 IPR001480 -
Apr9g2820 804 Pfam Protein kinase domain 522 784 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr9g2820 804 Gene3D - 22 151 IPR036426 -
Apr9g2820 804 ProSitePatterns Protein kinases ATP-binding region signature. 526 549 IPR017441 GO:0005524
Apr9g2820 804 CDD B_lectin 34 153 IPR001480 -
Apr9g2820 804 PANTHER RUST RESISTANCE KINASE LR10-RELATED 21 801 IPR045874 GO:0004672
Apr9g2820 804 Pfam D-mannose binding lectin 78 163 IPR001480 -
Apr9g2820 804 Coils Coil 548 568 - -
Apr9g2820 804 SUPERFAMILY alpha-D-mannose-specific plant lectins 65 188 IPR036426 -
Apr9g2820 804 Pfam S-locus glycoprotein domain 254 322 IPR000858 GO:0048544
Apr9g2820 804 ProSitePatterns Serine/Threonine protein kinases active-site signature. 640 652 IPR008271 GO:0004672|GO:0006468
Apr9g2820 804 CDD STKc_IRAK 526 790 - -
Apr9g2820 804 ProSiteProfiles Protein kinase domain profile. 520 790 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr9g2820 804 SMART blect_4 32 153 IPR001480 -
Apr9g2820 804 PIRSF SRK 1 804 IPR024171 GO:0004674
Apr9g2820 804 SUPERFAMILY Protein kinase-like (PK-like) 505 788 IPR011009 -
Apr9g2820 804 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE LECRK1 21 801 - -
Apr9g2820 804 Gene3D - 154 287 IPR036426 -
Apr9g2820 804 Gene3D Transferase(Phosphotransferase) domain 1 597 795 - -
Apr9g2820 804 Gene3D Phosphorylase Kinase; domain 1 488 596 - -
Apr9g2820 804 SMART serkin_6 520 787 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr9g2820 804 ProSiteProfiles Bulb-type lectin domain profile. 26 151 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g2820 Apr-Chr9 35188256 35190670 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g2820 509 797 Receptor kinase-like Gene Family AT5G20050 40.323 3.40e-65 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Apr9g2820 Pkinase 3.9e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g2820 - - gmx:100815958 1010.36