Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g2811 ATGAGGAAGGTAACGAGAAAGATCGGGAAGTATGAGGTCGGTCGAACTATTGGGGAAGGGACGTTCGCGAAGGTTAAGTTCGCTATAAACTCCGAGACAGGGGAGAGCGTGGCTATTAAAGTGATGGCTAAGACCACCATTCTCAAGCACAAAATGGTTGAACAGATTAAAAGGGAGATATCCATCATGAAGATTGTCAGGCATCCTAATATTGTCAGGTTGCATGAGGTTTTGGCCGGTCAGACAAAGATCTACATAATCCTTGAGTTTGTAATGGGAGGGGAACTATATGATAAAATTGTTCAGCAGGGAAAACTTTCTGAAAATGAATCCAGACGTTACTTTCAACAACTTGTAGATGCTGTTGCTCATTGTCATAGAAAGGGTGTGTACCATAGAGACTTGAAGCCTGAAAACCTTCTTCTTGATGCTTATGGAAATTTGAAGGTTTCTGATTTTGGATTGAGTGCATTGACTAAGCAGGGTGTTCGCCTTCTTTACACCACTTGTGGGACCCCAAATTATGTTGCTCCTGAGGTGCTCAATGATCAAGGATATGATGGTGCCGCAGCTGATGTTTGGTCATGTGGAGTCATCCTATATGTTCTAATGGCTGGATATCTTCCTTTTGAAGAGCCAGACCTTCCAACACTTTACAGAAGGATCAATGCTGCAGAATTTGTTTGCCCATTCTGGTTTTCTGCTGGCGCAAAGACTTTGATACATAAAATTCTGGATCCTAATCCTAAAACACGGGTGAAAATCGAACAAATAAGGAAAGATCCATGGTTCCAGAGAAACTATTTGCCTGTCAAACTCAGGGAAGATGAGCAAGTGAATTTGGATGATGTGAAGGCTGTATTTGATGATATTGAGGACCAGTATGTTGCTGAACGGTCAGAAATCACAGAGAGAGGTCCTTTGATAATGAATGCATTTGAGATGATTGCCTTATCACAAGGGTTGAATCTTTCACCTCTATTTGACAGGCATCAGGATTATGTAAAGCGGCAAACTCGATTTGTTTCCCGTAAACCAGCAAAAGTTATAATTTCATCTATTGAAGCAGTTGCGGAGTCAATGAGTCTTAAGGTCCATTCTCGCAATTACAAGATGAGGCTTGAAGGCATTTCTATAAATAAGGTTGGACAATTTGCAGTAGTCTTGGAGGTGTTTGAAGTTGCACCATCCCTTTTCATGGTTGATGTTCGGAAGGCAGCTGGGGATACTTTTGACTATCACAAGTTTTACAAGAATCTTTGTGCCAAACTAGAAAACATTATTTGGAGACCGACAGAGACTATGTCAAATTCAAATCTGCTTCGACAAATGACTTTATAA 1341 0.4094 MRKVTRKIGKYEVGRTIGEGTFAKVKFAINSETGESVAIKVMAKTTILKHKMVEQIKREISIMKIVRHPNIVRLHEVLAGQTKIYIILEFVMGGELYDKIVQQGKLSENESRRYFQQLVDAVAHCHRKGVYHRDLKPENLLLDAYGNLKVSDFGLSALTKQGVRLLYTTCGTPNYVAPEVLNDQGYDGAAADVWSCGVILYVLMAGYLPFEEPDLPTLYRRINAAEFVCPFWFSAGAKTLIHKILDPNPKTRVKIEQIRKDPWFQRNYLPVKLREDEQVNLDDVKAVFDDIEDQYVAERSEITERGPLIMNAFEMIALSQGLNLSPLFDRHQDYVKRQTRFVSRKPAKVIISSIEAVAESMSLKVHSRNYKMRLEGISINKVGQFAVVLEVFEVAPSLFMVDVRKAAGDTFDYHKFYKNLCAKLENIIWRPTETMSNSNLLRQMTL* 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g2811 446 SUPERFAMILY Protein kinase-like (PK-like) 8 320 IPR011009 -
Apr9g2811 446 ProSitePatterns Protein kinases ATP-binding region signature. 17 49 IPR017441 GO:0005524
Apr9g2811 446 Gene3D Transferase(Phosphotransferase) domain 1 91 272 - -
Apr9g2811 446 ProSiteProfiles NAF domain profile. 305 329 IPR018451 GO:0007165
Apr9g2811 446 Coils Coil 437 446 - -
Apr9g2811 446 Pfam Protein kinase domain 11 264 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr9g2811 446 Gene3D Phosphorylase Kinase; domain 1 1 90 - -
Apr9g2811 446 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 4 442 - -
Apr9g2811 446 Pfam NAF domain 307 366 IPR004041 GO:0007165
Apr9g2811 446 PANTHER - 4 442 - -
Apr9g2811 446 CDD CIPK_C 311 426 - -
Apr9g2811 446 ProSiteProfiles Protein kinase domain profile. 11 264 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr9g2811 446 ProSitePatterns Serine/Threonine protein kinases active-site signature. 130 142 IPR008271 GO:0004672|GO:0006468
Apr9g2811 446 SMART serkin_6 11 264 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr9g2811 446 Gene3D Kinase associated domain 1, KA1 304 430 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g2811 Apr-Chr9 35078510 35088910 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g2811 1 372 CBL-interacting serine-threonine protein kinases AT5G35410 73.925 0.0 593
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Apr9g2811 Pkinase 8.8e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g2811 - - gmx:100811380 807.749
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g2811 9 35078510 35088910 Apr9g2811 9 35078510 35088910 ECH