Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g2794 ATGCAAATTCACGAGAAGAAGCCAATGAAAGTTGTGACCATGGAGACTCAGAAGAAGTGCGGGTGTTGGGCTGTTCTTAAACGCGGCGTTAGAGGTGCGTGCAAACCTTCAGCTTCCAGAGACTCTGCTAACACTATCCCTCGTACTAGTCTCGTTTATGATGCAGCAACTGAGACAAGATACCTGAATGCTAGCAATAGAGAATTATGTCCTCCCAATGAAGATCGATTATCTTCTGATAATCCTGATCCACAGCCTCAGGAAAAAAAGGCTCCTTGCCAGCTTCTTCAATTTACATTTCAAGAACTCAAAGCTGCTACTGGAAATTTCAGACCTGATAGCATTCTTGGTGAGGGTGGCTTTGGTTATGTTTTCAAAGGATGGATTGAGGAAGACGGAACTGCCCCGGCAAAACCCGGGTCAGGGATTACCGTGGCTGTCAAAAGCTTGAAGCCAGATGGTCTTCAGGGCCATAGAGAATGGGTGGCTGAAGTTGACTTTCTTGGACAGCTTCACCACCCTAACCTTGTGAAACTCATTGGTTACTGTATCGAAGATGATCAGCGGCTTCTTGTTTATGAGTTTATGACCCGTGGAAGTCTAGAAAACCATCTATTCAGAAGAACCGTACCTCTTCCATGGTCCAACAGGGTTAAGATCGCACTTGGCGCAGCAAAAGGATTGGCCTTCCTCCACAATGGTCCAGAACCAGTCATTTATAGAGATTTTAAAACATCAAACATTTTGCTTGATACAGAGTACAACGCAAAGCTTTCAGATTTTGGTCTAGCAAAAGCAGGGCCTCAGGGAGACAAGACACACGTTTCTACTAGAGTTGTTGGAACTTATGGTTATGCTGCTCCAGAATATGTCATGACAGGACACTTGACAGCTAAAAGTGATGTTTATAGCTTTGGAGTGGTGTTACTTGAGATATTAACAGGAAGAAGATCAATGGACAAGAAGCGCCCAAGTGGGGAACAAAACCTTGTTTCATGGGCTAGGCCATATTTAGCCGACAAGCGAAAACTGTACCAACTTGTGGATCCTCGCTTGGAACTAAATTATTCTCTAAAAGGAGTGCAGAAAATTTCCCAGTTAGCTTATAATTGCCTCAGTAGAGACCCCAAATCCCGTCCTAACATGGATGAAGTTGTGAAGGCTCTGACTCCATTGCAGGATCTTAATGACCTGGCAATTTTGTCTTATCACTCTCGTTTGTCTCAACAAGGGAGACGAAAGAAGAAAGATGGAACTCCTCAGATCACTTACACGCAATCAAAGAGCATCAGGGCTTCTCCCCTGAATACTGGCAAGCAGCATCGATGA 1329 0.4439 MQIHEKKPMKVVTMETQKKCGCWAVLKRGVRGACKPSASRDSANTIPRTSLVYDAATETRYLNASNRELCPPNEDRLSSDNPDPQPQEKKAPCQLLQFTFQELKAATGNFRPDSILGEGGFGYVFKGWIEEDGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTVPLPWSNRVKIALGAAKGLAFLHNGPEPVIYRDFKTSNILLDTEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYAAPEYVMTGHLTAKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVSWARPYLADKRKLYQLVDPRLELNYSLKGVQKISQLAYNCLSRDPKSRPNMDEVVKALTPLQDLNDLAILSYHSRLSQQGRRKKKDGTPQITYTQSKSIRASPLNTGKQHR* 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g2794 442 Gene3D Phosphorylase Kinase; domain 1 85 195 - -
Apr9g2794 442 ProSitePatterns Protein kinases ATP-binding region signature. 116 148 IPR017441 GO:0005524
Apr9g2794 442 Gene3D Transferase(Phosphotransferase) domain 1 196 406 - -
Apr9g2794 442 PANTHER OS01G0588500 PROTEIN 81 410 - -
Apr9g2794 442 MobiDBLite consensus disorder prediction 67 89 - -
Apr9g2794 442 MobiDBLite consensus disorder prediction 420 442 - -
Apr9g2794 442 MobiDBLite consensus disorder prediction 409 442 - -
Apr9g2794 442 ProSitePatterns Serine/Threonine protein kinases active-site signature. 238 250 IPR008271 GO:0004672|GO:0006468
Apr9g2794 442 CDD STKc_IRAK 116 392 - -
Apr9g2794 442 SUPERFAMILY Protein kinase-like (PK-like) 93 395 IPR011009 -
Apr9g2794 442 ProSiteProfiles Protein kinase domain profile. 110 407 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr9g2794 442 Pfam Protein tyrosine and serine/threonine kinase 114 389 IPR001245 GO:0004672|GO:0006468
Apr9g2794 442 PANTHER OS01G0588500 PROTEIN-RELATED 81 410 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g2794 Apr-Chr9 34858407 34862507 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g2794 98 389 Glycoside Hydrolase AT3G07070 55.743 2.37e-110 330
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Apr9g2794 PK_Tyr_Ser-Thr 2.9e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g2794 - - aprc:113848012 900.582
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g2794 9 34858407 34862507 Apr9g2794 9 34858407 34862507 ECH