Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g2774 ATGTCTATCGCTGGGTTATTCTTGGTGCTGTTACTGCAACTGTCAACAATTTTTGGCTCTGCAGTTATCTTACTGTCAACGGATTGTGGCACTGATTGGGTTGCATATTCATATTCTAGTCATGGTCAGGAACTGTATTACATAAAAGGGAATGTAGTAGACAAGGTTGCTTTCTGTCAGGCACTCCAATTGTATATTGCAAATGGCTGTGATGTGAAGGACTACTTTGGAACTGTCAACTGTGTGTTGGATGAAACTTCTGTGAATTTACCTTCAAAGGCAGGGAGGAAACTTCTGCAGAAGGATGTAAGCAATAAATCCACATCACAAGGAGATTCTGAGCCTTTGTCAACCCATCAAGTTGGGCTTTATGCGGGTGGAGCTTTGTTGGTATGTTGTGCCGTTCTTTGTCCTTGTTTCTATGGGAAGAGACGGAAAGCAACTTCTCACGCTGTTCTGGCCAAGGATCCAAATTCAATGGATTCAGCCTCCTCCTTCGAAGCCTCCGTTACTGATAAGATTCCTGATAGGATTCCGGCCAGTCCACTCAGGGTGCCACCCAGTCCGTCAAGATTCTCAATGTCTCCAAAACTCAGTAGACTTCAATCATTACATCTCAACCTAAGTCAGGTTGCAAGAGCTACCCGAAATTTCTCAGAAACATTACAAATTGGAGAAGGAGGTTTTGGAACTGTCTACAAGGCTAAGTTAGAGGATGGCCTGATTGTGGCTGTAAAACGTGCAAAAAGGGAACATTTTGATAATTTGAGAACAGAATTCAGCAGTGAAGTAGAACTTTTGGCCAAAATTGATCATCGAAACCTGGTGAAGCTACTCGGTTATATTGACAAAGGAAATGAACGCCTTCTTATTACAGAGTATGTGCCAAATGGTACTCTTAGAGAACATTTGGATGGTCTGCGTGGAAAAATCCTAGACTTTAATCAGCGCCTTGAGATTGCAATTGATGTTGCTCATGGCTTGACCTATCTGCATCTGTATGCAGAAAAGCAAATTATCCATCGAGATGTGAAATCATCCAATATTCTTCTGACAGAAAACATGCGAGCTAAAGTTGCTGATTTTGGATTTGCAAGGCTGGGTCCAGTGAACACTGATCAAACACACATTTCAACCAAAGTGAAGGGCACAGTTGGTTATTTGGATCCTGAGTATATGAAAACATACCAACTCACTCCCAAAAGTGATGTTTACTCATTTGGAATTTTGCTTTTAGAAATTGTCACAGGCCGCCGTCCGGTGGAGTTAAGGAAAACTGTTGAAGAGCGTGTTACACTTAGATGGGCCTTCAGGAAGTATAACGAAGGGAGTGTGGTGGAATTGGTGGATCCTTTAATGGAAGAAGCTGTGAATGCGGATGTACTCATGAAGATGTTTGATTTGGCATTTCAATGTGCAGCTCCCATTAGAACAGATAGACCTGACATGAAATCAGTGTGTGAGCAACTATGGGCAATAAGGGCAGATTACCTCAAGAGTGCAAGGAGAGAATAA 1515 0.4224 MSIAGLFLVLLLQLSTIFGSAVILLSTDCGTDWVAYSYSSHGQELYYIKGNVVDKVAFCQALQLYIANGCDVKDYFGTVNCVLDETSVNLPSKAGRKLLQKDVSNKSTSQGDSEPLSTHQVGLYAGGALLVCCAVLCPCFYGKRRKATSHAVLAKDPNSMDSASSFEASVTDKIPDRIPASPLRVPPSPSRFSMSPKLSRLQSLHLNLSQVARATRNFSETLQIGEGGFGTVYKAKLEDGLIVAVKRAKREHFDNLRTEFSSEVELLAKIDHRNLVKLLGYIDKGNERLLITEYVPNGTLREHLDGLRGKILDFNQRLEIAIDVAHGLTYLHLYAEKQIIHRDVKSSNILLTENMRAKVADFGFARLGPVNTDQTHISTKVKGTVGYLDPEYMKTYQLTPKSDVYSFGILLLEIVTGRRPVELRKTVEERVTLRWAFRKYNEGSVVELVDPLMEEAVNADVLMKMFDLAFQCAAPIRTDRPDMKSVCEQLWAIRADYLKSARRE* 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g2774 504 Gene3D Phosphorylase Kinase; domain 1 189 294 - -
Apr9g2774 504 ProSitePatterns Serine/Threonine protein kinases active-site signature. 339 351 IPR008271 GO:0004672|GO:0006468
Apr9g2774 504 CDD STKc_IRAK 224 490 - -
Apr9g2774 504 PANTHER NODULATION RECEPTOR KINASE-LIKE PROTEIN 14 503 - -
Apr9g2774 504 Pfam Protein tyrosine and serine/threonine kinase 223 490 IPR001245 GO:0004672|GO:0006468
Apr9g2774 504 SUPERFAMILY Protein kinase-like (PK-like) 199 493 IPR011009 -
Apr9g2774 504 Gene3D Transferase(Phosphotransferase) domain 1 295 503 - -
Apr9g2774 504 PANTHER OS07G0166700 PROTEIN 14 503 IPR045272 GO:0004714|GO:0006468
Apr9g2774 504 ProSitePatterns Protein kinases ATP-binding region signature. 224 246 IPR017441 GO:0005524
Apr9g2774 504 SMART serkin_6 218 492 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr9g2774 504 ProSiteProfiles Protein kinase domain profile. 218 492 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g2774 Apr-Chr9 34630249 34634954 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g2774 203 493 Receptor kinase-like Gene Family AT5G59700 46.392 7.20e-75 250
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IV Apr9g2774 PK_Tyr_Ser-Thr 1.7e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g2774 - - aprc:113845864 981.859
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g2774 9 34630249 34634954 Apr9g2774 9 34630249 34634954 ECH