Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g2753 ATGGGGAAGAAAAAGAAGCAACTAGGAGACACAAGGGAAGATAGTAAAGACGGAGTTAGCTACCCTAGAGCATATGACAATGATACTATGGTTTTTATTTCCATGTCTCGAGAATTGAAGAATGAAGGGAACAAGTTGTTCCAGAAGCGGGATCTTGAAGGAGCTATACTAAAATATGAGAAAGCCCTCAATTTACTTCCCAGAAATCATATTGATGTGTCCTATCTTCGAAGTAACATGGCTGCATGTTACATGCAGATGGGACTGAGTGAGTACCCTAGGGCAATTCATGAATGCGATTTGGCTCTTGATGTAACACCCAAATATAGTAAAGCTCTGTTGAAGAGGGCACGGTGCTATGAGGCTTTAAATAGGCTTGATTTAGCTCTGAGAGATGTCAATACTGTTGTGAAGATGGAGCCAAATAATGTCATGGCATTGGAAATCTCAAACAAGGTCAAAAAAGCACTTGAGGAGAAAGGATTACAAGTAAATGATACAATAATTGAGTTGCCTCCAGATTATGTTGAACCTCCTTCTACTTTGCCTCTAGTAAAGTTCACACGCAAGAAGAAGGGCAGTAAAGAGGAAGAGAAGGCTCCTGATAACAAAATTCTTGAAAAGCAAGCTGAGGATAGTGTTGTAGTCATAGAGAAGAGTTCCAAAAAGAAGAAGGCCAAGGAAAAAAATGATGAGAAGAAGGCTGATATTAAGGAAGTTATAGAGGAAAGATGTACTGGTAGAAGGGAAGATGTACCTAAAAAAACAGCAAAACTTATTTTTGGTGATGATATAAGATGCGCTGAAATGCCTAATAATTGTAGCCTCTTCCAGTTGAGAGAAGTTATTCATGATCGGTTCGCAGGCCTAGGAGCTGTTCTTGTCAAATACAGGGACCAAGAAGGTGATTTGGTCACAATCACTTCTGATGATGAATTAAGATGGGCTCAAAAAGAATCACATGGTTCTATTCGCCTCTACATAGTTGAAGCCACTCCCCAGCAGGATCCATTTTTCGAGAAACTTAAAGTAAAGGAAGGGGAAATGGTTGGCATTAATGATGCAATTGAGAATGGTTGCGTGAGAAAAGCAAAGGATATTATTAGCTCTTGTTGTGTTGAGGATTGGATAATTCAGTTTGCCAAACTGTTCAAGAACCATGTTGGGTTTGAATCTGACAGGTATTTGGATTTTCATGAACTTGGAATGAAGCTCTATTCTGAGGCTTTGGAGGAGACGGTTACAAGTGAAGAAGCACAAGGCCTATTTGACATGGCAGAAGATAAGTTCCAAGAGATGACTGCTCTAGCATTGTTCAACTGGGGAAATGTGCATATGTCTATGGCAAGGAAGAAAGTATATTTTACAGAAGATTCTTCAAAGGATTATGTATGTGAACAAATCAAAAGTTCTTATGAATGGGCACAGAAAGAATATGCAAAAGCAGGAGAAAAATATGAAGCAGCCATTAAAGTTAAGTCAGATTTTTATGAAGGCTTCCTGGCACTAGGGCAGCAGCAGTTTGAGCAAGCAAAACTTTCTTGGTGTCATGCACTCAGTAGTAATGTAGATTTACTGACATGGCCTTCCACTGAGGTTCTTCAGCTTTACAACAATGCTGAGGATAATATGGAGAAAGGAATGCAGATATGGGAAGAATCAGAAGAGCAGCACTTGTGTAAAGCTTCTAATTCAAATGATGTTAGATTACATTTGCAGACCATGGGATTGGATGGGCTTTTTAAAAATATATCCTCAGATGAAATTGCATCACAGGAGGCAAATATGAGGTCTCAAATAAATCTCCTATGGGGTACCATGCTATATGAACGCTCAATTGTAGAATTCAAATTAGGGCTACCAATATGGCATGAATCTCTGGAAGTTGCAGTTGAGAAGTTTGAACTTGCTGGAGCTTCTCCAACAGATATAGCTGTAATTTTGAAGAACCACTGTTCAAATAATACTGCAGTAGACGGCCTTGCATTCAAAATTGATGAAATAGTACAGGCATGGAATGATATGTACAAAGCTAAAAAGTGGCAAAGTGGAGTTCCATCATTTCGTTTGGAACCATTATTTAGAAGGAGAGTTTCAAAAATTTATCATGCCTTTGAGCTTGCATGA 2127 0.3893 MGKKKKQLGDTREDSKDGVSYPRAYDNDTMVFISMSRELKNEGNKLFQKRDLEGAILKYEKALNLLPRNHIDVSYLRSNMAACYMQMGLSEYPRAIHECDLALDVTPKYSKALLKRARCYEALNRLDLALRDVNTVVKMEPNNVMALEISNKVKKALEEKGLQVNDTIIELPPDYVEPPSTLPLVKFTRKKKGSKEEEKAPDNKILEKQAEDSVVVIEKSSKKKKAKEKNDEKKADIKEVIEERCTGRREDVPKKTAKLIFGDDIRCAEMPNNCSLFQLREVIHDRFAGLGAVLVKYRDQEGDLVTITSDDELRWAQKESHGSIRLYIVEATPQQDPFFEKLKVKEGEMVGINDAIENGCVRKAKDIISSCCVEDWIIQFAKLFKNHVGFESDRYLDFHELGMKLYSEALEETVTSEEAQGLFDMAEDKFQEMTALALFNWGNVHMSMARKKVYFTEDSSKDYVCEQIKSSYEWAQKEYAKAGEKYEAAIKVKSDFYEGFLALGQQQFEQAKLSWCHALSSNVDLLTWPSTEVLQLYNNAEDNMEKGMQIWEESEEQHLCKASNSNDVRLHLQTMGLDGLFKNISSDEIASQEANMRSQINLLWGTMLYERSIVEFKLGLPIWHESLEVAVEKFELAGASPTDIAVILKNHCSNNTAVDGLAFKIDEIVQAWNDMYKAKKWQSGVPSFRLEPLFRRRVSKIYHAFELA* 709
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g2753 708 Gene3D - 255 333 - -
Apr9g2753 708 Coils Coil 223 243 - -
Apr9g2753 708 PANTHER PROTEIN CLMP1 4 707 IPR044517 -
Apr9g2753 708 SMART tpr_5 74 109 IPR019734 GO:0005515
Apr9g2753 708 SMART tpr_5 36 69 IPR019734 GO:0005515
Apr9g2753 708 SMART tpr_5 110 143 IPR019734 GO:0005515
Apr9g2753 708 CDD PB1 258 328 - -
Apr9g2753 708 PANTHER PROTEIN PHOX3 4 707 - -
Apr9g2753 708 ProSiteProfiles TPR repeat profile. 110 143 IPR019734 GO:0005515
Apr9g2753 708 Pfam PB1 domain 256 330 IPR000270 GO:0005515
Apr9g2753 708 MobiDBLite consensus disorder prediction 1 21 - -
Apr9g2753 708 SUPERFAMILY TPR-like 37 150 IPR011990 GO:0005515
Apr9g2753 708 SMART PB1_new 254 331 IPR000270 GO:0005515
Apr9g2753 708 MobiDBLite consensus disorder prediction 1 22 - -
Apr9g2753 708 ProSiteProfiles PB1 domain profile. 254 331 IPR000270 GO:0005515
Apr9g2753 708 SUPERFAMILY CAD & PB1 domains 256 340 - -
Apr9g2753 708 Gene3D Tetratricopeptide repeat domain 34 178 IPR011990 GO:0005515
Apr9g2753 708 ProSiteProfiles TPR repeat profile. 36 69 IPR019734 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g2753 Apr-Chr9 34470570 34475184 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g2753 24 143 Calmodulin-binding Proteins AT3G25230 29.851 1.54e-06 49.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g2753 9 34470570 34475184 Apr9g2753 9 34470570 34475184 ECH
Apr9g2753 9 34470570 34475184 Apr1g2537 1 34930047 34935378 PCT