Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g2748 ATGAGACTGAAGGAAGGAACAAGACCACCATGGGTAGGTCTTGGAGCTGCTGTGTGGGTTCAAATTGCTTCGGGAAATGGCTACACTTTCCCTCTCTATTCTCACTCCTTGAAATCCGTTCTGGGCTTCAACCAGCGCCAAGTTACCCTTCTTGGTGTGGCCAACGATATTGGTGAAAATGTTGGCATTCTTCCTGGTCTTGCCTGCAACAAGTTGCCTCCTTGGCTCATCCTCTTCATCGGTGCTTTCTTCTCTCTCATTGGTTTCGGTTTTCTTTGGCTTGCAATCTCTCAAACTATTTCCTCGCCTCCTTACTTCTTGCTATGGCTTGCCCTTGCTATTGCCACCAACAGTTGTGCATGGTTATCCACTGCTGTTCTTGTAACCAACATGAGAAATTTCCCTGTCAGTAGAGGCACAGTTGCAGGAATCCTGAAGGGTTATGCGGGCCTTAGTGCTGCGGTTTTTACCGAGATTTACAGTGTTGTTCTTCATAATTCTTCTCCCAAGTTCCTCTTGTTCCTTGCCATTGGTATTCCTGTTTTATGCTTCAGTACAATGTTTCTTGTTCGGCCTTGTACTCCAGCTTTGGGTGAAGATTCTTCACATAAAGAGCAATTTCTTTTTATCCAAGGTTCTAGTGTGGCCTTGGGTATATATATCCTCGTAACAACATTACTAGGTGACTTTCTCTCTGTGAGTGATAGTGTGTCATATATTTTGTTGGCTGTGATGGCTCTCCTTCTTATGACTCCACTTGCTGTCCCAATAAAGATGACACTAAAAGCCTCTGAATCCGAAGGTGGCAATGACAACATACAGCCCCTGTTATCATCTCCATTAGCTAATGCCCTTGGAAATTTTAATGATGCGGATGGTTCTTCTGAGGTGGCTATGCTTCTGGCTGAGGGTGAAGGAGCAGTGAGGAAGGAGAGAAGGCCTAAACGAGGGGAAAATTTTAAGTTTACTGAGGCTGTTGTAAAGGCTGATTACTGGCTGCTGTTTTTTGTTTACTTTGTTGGTGTTGGAACTGGGGTTACTGTTCTTAATAATCTGGCTCAAATTGGTATTGCTCGTGGTGCGGAAGATACTACTATCTTGCTTTCACTTTTCAGCTTTTTTAATTTTGTGGGTCGGCTTGGTGGAGGAGTTGTTTCAGAGCATTTTGTCAGGACGAAAACGATGCCACGGACAATTTGGATGACATGCACGCAAGTGATTATGATCATCTTGTACCTTCTGTTTGCCTATGCTATCAATGGAACACTTTATCTTTCAATTGCAGTTCTTGGTGTCTGCTATGGCGTGCAATTTTCCATTGTGATTCCCACTGTTTCAGAGCTTTTTGGGTTGAAGCACTTCGGCTTATTGTTCAACTTCATGTCTTTGGGGAATCCACTTGGCGCATTACTTTTCTCAGCCCTTCTAGCAGGGCACATATATGATAATGAGGCAGCGAAGCAGCATGGTGCAGGCCTCATTGCTTCAACTGTTTCGTGTGTGGGTCCAAATTGTTTCAAGCTCACCTTTTTAACTTTGGCTGGTGTGTGTGTTGCGGGCATCATCGCAAGCATTATCTTGACTAAAAGAATTAAGCCCGTTTACCAAATGCTTTATTCTGGGGGTTCTTGCAGGGTACCTCAAACATCAAGCCACCAACCTAGTGAAGTTGAATAA 1677 0.4407 MRLKEGTRPPWVGLGAAVWVQIASGNGYTFPLYSHSLKSVLGFNQRQVTLLGVANDIGENVGILPGLACNKLPPWLILFIGAFFSLIGFGFLWLAISQTISSPPYFLLWLALAIATNSCAWLSTAVLVTNMRNFPVSRGTVAGILKGYAGLSAAVFTEIYSVVLHNSSPKFLLFLAIGIPVLCFSTMFLVRPCTPALGEDSSHKEQFLFIQGSSVALGIYILVTTLLGDFLSVSDSVSYILLAVMALLLMTPLAVPIKMTLKASESEGGNDNIQPLLSSPLANALGNFNDADGSSEVAMLLAEGEGAVRKERRPKRGENFKFTEAVVKADYWLLFFVYFVGVGTGVTVLNNLAQIGIARGAEDTTILLSLFSFFNFVGRLGGGVVSEHFVRTKTMPRTIWMTCTQVIMIILYLLFAYAINGTLYLSIAVLGVCYGVQFSIVIPTVSELFGLKHFGLLFNFMSLGNPLGALLFSALLAGHIYDNEAAKQHGAGLIASTVSCVGPNCFKLTFLTLAGVCVAGIIASIILTKRIKPVYQMLYSGGSCRVPQTSSHQPSEVE* 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g2748 558 CDD MFS_Mch1p_like 9 521 - -
Apr9g2748 558 SUPERFAMILY MFS general substrate transporter 12 195 IPR036259 -
Apr9g2748 558 Pfam Nodulin-like 10 257 IPR010658 -
Apr9g2748 558 PANTHER NODULIN-LIKE/MFS TRANSPORTER 1 552 - -
Apr9g2748 558 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 1 552 - -
Apr9g2748 558 Gene3D MFS general substrate transporter like domains 328 533 IPR036259 -
Apr9g2748 558 SUPERFAMILY MFS general substrate transporter 210 533 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g2748 Apr-Chr9 34447059 34449904 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g2748 4 552 Nodulin-like Gene Family AT1G80530 56.483 0.0 646
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g2748 - - gmx:100787328 877.085
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g2748 9 34447059 34449904 Apr9g2748 9 34447059 34449904 ECH
Apr9g2748 9 34447059 34449904 Apr1g2541 1 34952374 34955144 PCT