LGRPv2

Gene search

Sequence information

Show entries

Search:

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Apr9g2735	ATGGCGTTTGATCAAAATTCCGTTCCTATGGATCTTCGTCCGTTAAACGTAGTTCCGGGGATGGCGGAGGAACCCCTCATTTCGCCGGTAACCGTCACGCCACCACCGACTCCGAATTCGGCTCGCGAGCTTTTCTACCAGCCAGCGGTCTCCGCAACGTGGCACGTTTGCTCCATTGCGCATACCAATGCGAACTCTGCTCCTTTTGGTTTTAACTACGGTGGTTCTGGTTTCGGTAATCGTGTTGTGACTGGGAATGCTATGAATTTGGGGAACTGGGTGGGGGCTAATGGATTGGATAGGGTTAGCAATGATGTAAATGGTTTTGGTGGTGCTGCTCTTCGGGGGAATAGAGTGGTTGATCAGGTTCAGGTCGGTGATGAGGGTGGGGATGATTTGGTTTCAGGGAGGAAAGTGAAGTTTTTGTGTAGTTTTGGTGGGAAGATATTGCCTAGGCCTAGTGATGGAATGTTGAGATATGTTGGAGGGCAAACGAGGATCATTAGTGTTAGGAAAGATGTTAGTTTCAATGATTTGGCGCAGAAGATGGCTGATACTTATGGCCAGCCTGTGGTTATCAAGTATCAGCTACCCGAGGAGGATCTTGATGCTTTGGTGTCTGTTTCATGCCCTGATGATGTTGAGAATATGATGGAGGAGTATGAAAAATTGGTTGAGAGATCTCCGGATGGTTCTGCAAAGTTGAGGGTTTTTCTGTTTTCGGCTTCGGAGACTGAACTTTCTGGTGGGATGCAGTTTGGGGACTTGCAAGATACCGGGCAGAAGTATTTTGATGCTGTGAATGGAATTGGTATTGCGGATGGGAATGGGGATAGTGCTGGAATCAATAGGAAGGAGAGCATCGCCAGTGCAGCTTCAACCCAGAATTCTGATTTGAGTGGGAATGAGATTATTGACGGTTCAATTGCTAGTCCAGGGGATGTCAGTGGGGCGCCTGTGTCGCCACCTAAGGAGAATGTGGCAGCTTCTCAAGACACGAGTGCAAATTTGGCAGTTTTGGAGCCCGGTGCAGCAGTTTACTCAGGTGCTTTTGCGGTTTCATCGGCCATGCCTGTGGCTAAGACTAGTCCAACACAAACTCCATATTTCCAGAAAGAGGTAGAGTTAGAAAAGTCTGTGCCTGTTACTGTATCCCAGCAGCCATATGGATTGCAGCCATCTGGAACGGAAATTTCAATACCTTCACGTTATTTGCAGCCATTTGTTGATCCAGGCAAGGAGGTTGTGAACCATGCAGATTATGTCCAGCTGCCTTCCTCGATGGGGATGACAAATCAGCTTTTAGGGAAGACTGGGCCTGTCTTCACCCAACAGCAGTTTCATGATAATAGCCCTGGTTTAGCATTCCATCAGGTCATCCCTGGGGTACGAATGACAATGACGCAATCATCTTCTCATGTTGGTGTAAGGCCCAATGCTATTCAACCACAACCATTGGTGCAACCTCAGCAACAACGTTTGGATAAATATAATGATGAAAATGCATCAGGGATAAGGATTGTCCAGCTTCCTGCTGAACGCAGCTATAACGCATACCAGGTTCCAGTGAATCAAGTCCCATCTGTCATAGTTGGAGGTAATTATGGCTGGGTTCAGGTTCCTCCACAAGAGCATGTCGTTTTCTCTGATGGGTTATTACCTCAACAACATGTAATGATCCCTGAGAATATCCAAAGAGTCGAGGACTGTTTTATGTGTCAGACAAAACTACCTCATGCACATTCAGATCCCGTTCCTCTGGTTCAGGATCAGCGTAATAGTGGTGTGGGTCCAATTCATGATTTATCCCCAAGTCACCGTAGTTTCCCAATGGAGGACAGTATGAAAGTTCAAGCAACAAATTGGGTTATGCCTATGGTGACTGCACCCTTGAAGGAAGGCATTGTTGAACAAGGGGCTGGGACCAGGCCAAGGGTTGTTGGCAAATTGGAACCTCCAGATGGAGTAAATCGTACTGATACAACTGACCTTTCTCATAATATTGAGCCACAGACTGTAGGCGGGAGGGTCTTTAAACAAAAGCTAGAAGAATTTGATCAACCCAGGAATTCATTTTTCCAGGAAGAGATTGGAAGGACAGGTAGAGAACAGTCTCTCAATGATGGGCTCATGGGAACCGCACCACTGTCTTATCCAGAAGATGTTGTTGACCAGCACACAGTACCAACAGAAAACTGGGTTAAACATGATGTGCTTGTTGACAAAACTGTCAATAATGATATAACTGTCGTTGATGGAACAGCTAAACAAACTTCAGAGTGTATGGTTCAAGGATCTCTAAAAGAATATACTAATGAGCCTACTGGTGTTGTTTCTAAGTCAGACGTAGTAGATAATTGGATTAGAAAAGACCATCTAAAACCTATTGATGGAAGGATGGACACCTGCAAGTTATGCAATCCTGAAGTTTATGTAAGTAATGATCAATGTTTTCTCCAAAGTAGGAATGATAACTTAGATTACGACACTCGCCATTCCGTAGAGGAAGAGGTGATTCTGGATAACTTTGTCAGGTCAAAATTGATAGTTGATCCCAATCAAAATAAGATTACAGGTGTGCTGCCTTGTTCTTCTACTGAAATTTCATATGGGCACAATTCCAGGCCAGGTGAATATGAGGCCATACATGCCCCTGTTTGGGGCATTCCTGGTTCAAATCCTCAATCAAATATTGGAACCCACCAAAAGGATGACACAGCATCATCCGCAACATCACCCTCTGTCAGGTTTAGAGAAGTGCAGGATACTCCAAGCTCACTTTTCAGCAATCAGGATCCCTGGAGTATACAGCATGGTACCTTCTTTCCACCTGTCATGCCTAGCAAAGCTTTATTAAAGAAAGAAACCTCTTCTCGGAAGGATCATTTTGGTGAAAATCCGGGCAACAGTGCGGAACAAAGTTTAAAGTCACAATTGGATGATGACCTCTACCAGTCATTCAAACAAAATTTGACTTTTGAGCATGGTCGGTCTGCCAAAGGCTCCACTGAAGACCAACAACTTCAAGCTGTTGCTGAAGATGTTGCAGCCTCTGTTCTGCACTCAAGAACTCTTTCAAATCCTGAAGAGTTTGAGGATGGCAATGCTTCAAATAATCCGATAGATGTGAAGTGCAGAGATAAAACTCAGGATGTCAACAGCAAGCCACTGGAAAAGGGAAATTTTGGCTTTCCAGCAACAGGTGTTGGAAAATTACAGGTTATAAAGAATTGTGATCTTGAAGAACTGACAGAACTCGGTTCTGGTACCTTTGGGACTGTATATCATGGAAAATGGAGGGGTTCTGATGTTGCAATCAAACGGATTACTGATAGGTGTTTTGCTGGAAAGCCTTCAGAGCAAGAGCGCATGAGAGATGACTTCTGGAATGAGGCAATCAAGCTTGCCGACTTGCACCATCCAAATGTGGTAGCTTTCTATGGTGTTGTGCTTGATGGCCCTGGAGGTTCTGTGGCAACAGTAACCGAATATATGATTAACGGTTCTCTGAGAAATGTCTTGCAGAAGAGTGAGAGGAATCTTGATAGGCGCAGGCGTCTTTTGATTGCAATGGATGTGGCCTTTGGTATGGAGTACTTGCATGGAAAAAACATAGTACACTTTGACTTGAAAAGTGACAACTTGCTTGTGAATCTCAGAGATCCACACCGTCCAATATGCAAGGTTGGTGACTTGGGTCTGTCCAAAGTAAAATGTAAAACGCTGATCTCTGGCGGTGTTAGAGGAACTCTACCATGGATGGCTCCAGAACTGCTCAACGGAAGCAGTAACCTTGTTTCAGAGAAGGTTGATGTGTTTTCATTTGGCATTGTAATGTGGGAACTTTTGACTGGAGAAGAGCCGTATGCCGACTTGCATTATGGTGCTATTATCGGTGGTATTGTGAGCAACACTTTGCGCCCTCCTGTTCCTGAATCTTGTGATCCAGAATGGAGATTGTTGATGGAGAGGTGCTGGTCATCGGAGCCAATAGAGAGACCTACCTTCACTGATATTGCCAATGAATTACGTTCTATGGCAGCCAGGATCTCTCCTAAAGGACAAAACCAACAGTTGCAACCCTCTTCGTTGCAGACTCAAGTCCAGAAATAA	4113	0.4491	MAFDQNSVPMDLRPLNVVPGMAEEPLISPVTVTPPPTPNSARELFYQPAVSATWHVCSIAHTNANSAPFGFNYGGSGFGNRVVTGNAMNLGNWVGANGLDRVSNDVNGFGGAALRGNRVVDQVQVGDEGGDDLVSGRKVKFLCSFGGKILPRPSDGMLRYVGGQTRIISVRKDVSFNDLAQKMADTYGQPVVIKYQLPEEDLDALVSVSCPDDVENMMEEYEKLVERSPDGSAKLRVFLFSASETELSGGMQFGDLQDTGQKYFDAVNGIGIADGNGDSAGINRKESIASAASTQNSDLSGNEIIDGSIASPGDVSGAPVSPPKENVAASQDTSANLAVLEPGAAVYSGAFAVSSAMPVAKTSPTQTPYFQKEVELEKSVPVTVSQQPYGLQPSGTEISIPSRYLQPFVDPGKEVVNHADYVQLPSSMGMTNQLLGKTGPVFTQQQFHDNSPGLAFHQVIPGVRMTMTQSSSHVGVRPNAIQPQPLVQPQQQRLDKYNDENASGIRIVQLPAERSYNAYQVPVNQVPSVIVGGNYGWVQVPPQEHVVFSDGLLPQQHVMIPENIQRVEDCFMCQTKLPHAHSDPVPLVQDQRNSGVGPIHDLSPSHRSFPMEDSMKVQATNWVMPMVTAPLKEGIVEQGAGTRPRVVGKLEPPDGVNRTDTTDLSHNIEPQTVGGRVFKQKLEEFDQPRNSFFQEEIGRTGREQSLNDGLMGTAPLSYPEDVVDQHTVPTENWVKHDVLVDKTVNNDITVVDGTAKQTSECMVQGSLKEYTNEPTGVVSKSDVVDNWIRKDHLKPIDGRMDTCKLCNPEVYVSNDQCFLQSRNDNLDYDTRHSVEEEVILDNFVRSKLIVDPNQNKITGVLPCSSTEISYGHNSRPGEYEAIHAPVWGIPGSNPQSNIGTHQKDDTASSATSPSVRFREVQDTPSSLFSNQDPWSIQHGTFFPPVMPSKALLKKETSSRKDHFGENPGNSAEQSLKSQLDDDLYQSFKQNLTFEHGRSAKGSTEDQQLQAVAEDVAASVLHSRTLSNPEEFEDGNASNNPIDVKCRDKTQDVNSKPLEKGNFGFPATGVGKLQVIKNCDLEELTELGSGTFGTVYHGKWRGSDVAIKRITDRCFAGKPSEQERMRDDFWNEAIKLADLHHPNVVAFYGVVLDGPGGSVATVTEYMINGSLRNVLQKSERNLDRRRRLLIAMDVAFGMEYLHGKNIVHFDLKSDNLLVNLRDPHRPICKVGDLGLSKVKCKTLISGGVRGTLPWMAPELLNGSSNLVSEKVDVFSFGIVMWELLTGEEPYADLHYGAIIGGIVSNTLRPPVPESCDPEWRLLMERCWSSEPIERPTFTDIANELRSMAARISPKGQNQQLQPSSLQTQVQK*	1371

Showing 1 to 1 of 1 entries

Annotation information

Show entries

Search:

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Apr9g2735	1370	Gene3D	-	159	242	-	-
	Apr9g2735	1370	MobiDBLite	consensus disorder prediction	953	976	-	-
	Apr9g2735	1370	CDD	STKc_MAP3K-like	1086	1343	-	-
	Apr9g2735	1370	Pfam	Protein tyrosine and serine/threonine kinase	1083	1343	IPR001245	GO:0004672\|GO:0006468
	Apr9g2735	1370	SMART	PB1_new	153	242	IPR000270	GO:0005515
	Apr9g2735	1370	PANTHER	SERINE-THREONINE PROTEIN KINASE	103	909	-	-
	Apr9g2735	1370	PANTHER	SERINE-THREONINE PROTEIN KINASE	898	1350	-	-
	Apr9g2735	1370	PANTHER	KINASE SUPERFAMILY WITH OCTICOSAPEPTIDE/PHOX/BEM1P DOMAIN-CONTAINING PROTEIN	898	1350	-	-
	Apr9g2735	1370	PANTHER	KINASE SUPERFAMILY WITH OCTICOSAPEPTIDE/PHOX/BEM1P DOMAIN-CONTAINING PROTEIN	103	909	-	-
	Apr9g2735	1370	CDD	PB1_UP2	142	240	-	-

Showing 1 to 10 of 27 entries

Previous1 2 3Next

Duplication type information

Show entries

Search:

Select	Gene	Chromosome	Start	End	Duplicated_type
	Apr9g2735	Apr-Chr9	34327908	34334914	Dispersed/Wgd

Showing 1 to 1 of 1 entries

Functional genes information

Show entries

Search:

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Apr9g2735	94	585	MAP Kinase Kinase Kinase	AT3G46920	39.489	6.05e-86	304

Showing 1 to 1 of 1 entries

Transcription factors information

Show entries

Search:

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	TKL-Pl-6	Apr9g2735		PK_Tyr_Ser-Thr	1.4e-58	CL0016

Showing 1 to 1 of 1 entries

Pathway information

Show entries

Search:

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Apr9g2735	-		-	gmx:100819234	1839.7

Showing 1 to 1 of 1 entries

Event-related genes

Show entries

Search:

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Apr9g2735	9	34327908	34334914	Apr9g2735	9	34327908	34334914	ECH
	Apr9g2735	9	34327908	34334914	Apr1g2551	1	35040950	35048844	PCT

Showing 1 to 2 of 2 entries