Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g2713 ATGTCTATTAGAAGACCCCCATTCCCTCGTCTCCTCCTTAACAATGTCTCTTGCATGAGAAATGCGCAGCAAGTTCTGCGTCATGTGAACGTCTCTCTTCATGACGGAGGAGCACTTATGCTAACAGGTGCAAATGGCTCTGGAAAGACAACTTTCCTGCGCATGTTAGCCGGGTTTTCTCGTCCTTCTGCTGGTGAAATCCTTTGGAATGGCCATAACATTCAAGAATCTGGAATATTCCATCAGTATAAGCTCCAGCTTAACTGGCTTTCTCTCAAAGATGCTATTACAGAAAATTTTACAGTTCTTGACAACGTTCAATGGTTTGAAGTTCTTGAAGGCAAGCAAGGGAAGGCTATGCCTGCACTTGAGTTGATGGGACTAGGAAAATTGGCCAAGGAAAAGCCAAGGATGCTATCCATGGGCCAGCGGAAAAGACTGCAACTTGCCAGGTTGCTGGCAATTGATCGCCCCATTTGGTTGCTAGATGAGCCTTCAGTTGCATTAGATGATGAAGGTGTAAAGTTACTAGAGTATATTATTGCGGAACATAGGAAGCAGGGAGGAATTGTGATTGTGGCGACTCATTTGCCCATTGAGATAGAAGATTCCTTGATCTTGAGGCTTCCACCAAGGTTTCCGAGGAGGATGACTTTGGTGGATATGCTTGACCGAGCAGATATTAGTTAA 690 0.4478 MSIRRPPFPRLLLNNVSCMRNAQQVLRHVNVSLHDGGALMLTGANGSGKTTFLRMLAGFSRPSAGEILWNGHNIQESGIFHQYKLQLNWLSLKDAITENFTVLDNVQWFEVLEGKQGKAMPALELMGLGKLAKEKPRMLSMGQRKRLQLARLLAIDRPIWLLDEPSVALDDEGVKLLEYIIAEHRKQGGIVIVATHLPIEIEDSLILRLPPRFPRRMTLVDMLDRADIS* 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g2713 229 TIGRFAM ccmA: heme ABC exporter, ATP-binding protein CcmA 13 208 IPR005895 GO:0017004|GO:0022857
Apr9g2713 229 PANTHER ABC TRANSPORTER I FAMILY MEMBER 1 9 223 IPR005895 GO:0017004|GO:0022857
Apr9g2713 229 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 11 228 IPR003439 GO:0005524
Apr9g2713 229 Pfam ABC transporter 26 166 IPR003439 GO:0005524
Apr9g2713 229 Gene3D - 8 208 IPR027417 -
Apr9g2713 229 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 9 200 IPR027417 -
Apr9g2713 229 SMART AAA_5 35 223 IPR003593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g2713 Apr-Chr9 34133079 34134127 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g2713 24 178 Calmodulin-binding Proteins AT2G36910 26.316 3.02e-10 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g2713 - - cpap:110815669 406.371