Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g2705 ATGTGTGACAAAGCCAGTAGCGACCCTCACTCCACTTTGCTCCACGGCAAGTACGAGCTAGGGCGCGTGTTGGGCCACGGAACATTCGCCAAGGTGTATCACGCGCGGAACCTGCAGACGGGGAAACACGTTGCCATGAAGGTGGTTGGGAAGGAGAAGGTGATCAAGGTTGGGATGATGGAGCAGATCAAGAGAGAGATTTCGGTCATGAAGATGGTCAAGCACCCAAACATCGTTCAACTCCACGAAGTCATGGCTAGCAAGTCCAAGATCTACATCGCCATGGAACTCGTCCGTGGCGGGGAGCTCTTCAACAAGGTTTCCAAAGGCCGGTTGAAGGAAGACGTGGCCAGAGTGTATTTCCAGCAGTTAATCTCCGCCGTCGATTTCTGCCACAGCCGCGGCGTTTACCACCGCGACCTCAAGCCCGAGAATTTACTTCTAGACGAACACGGCAACCTTAAAGTCTCCGACTTCGGACTCAGCACGTTTGCTGAACATCTGAGGCAAGACGGGTTGTTGCACACCACGTGCGGGACGCCGGCGTACGTGTCACCTGAGGTGATAGCGAAGAAGGGTTACGACGGTGCCAAGGCTGATATATGGTCGTGTGGGGTGATACTGTACGTGCTTCTTGCTGGGTTTTTACCCTTTCAGGACGATAATTTGGTGGCTATGTATAAGAAGATTTACAGGGGTGACTTCAAGTGTCCTCCTTGGTTTTCCTTGGAAGCTAGAAGGCTCGTGACGAAGCTTCTGGACCCGAATCCGAATACCCGAATAAGCATATCCAAGGTGATGGAGTGTTCTTGGTTTAAGAAGAGCATGGTGAGGGCGAAGGAGGAGGAGGAGTTTGAGTTGGAGGAGAAGTTGGAAAGAGAGAGGCCAAAGAGTATGAACGCGTTTCACATAATCTCGTTGTCGGAAGGGTTCGATTTGTCACCGTTGTTTGAGGAGAAGAAGAGAGAGGAGAGGGAGGAGATGAGGTTCGCCACCGCGGGGACAGCGAGCAGTGTGATATCGAGGTTGGAAGAGGTGGCTAAGGCGGTGAAGTTTGATGTGAAGAGCAGTGAGAACAAGGTGAGGCTTCAGGGGCAGGAGCGTGGGAGGAAGGGCAAGTTGGCGATTGCGGCGGATATTTACGCCGTTACGCCGTCGTTTCTTGTGGTGGAGGTGAAGAAGGACAAGGGTGACACCTTGGAGTATAACCAGTTCTGTAGCAAAGAGCTTCGTCCTGCTCTCAAAGATATTCTATGGACTTCCCCTGAGAATTCAACGCCTGCTAGTGCTTGA 1293 0.5228 MCDKASSDPHSTLLHGKYELGRVLGHGTFAKVYHARNLQTGKHVAMKVVGKEKVIKVGMMEQIKREISVMKMVKHPNIVQLHEVMASKSKIYIAMELVRGGELFNKVSKGRLKEDVARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDEHGNLKVSDFGLSTFAEHLRQDGLLHTTCGTPAYVSPEVIAKKGYDGAKADIWSCGVILYVLLAGFLPFQDDNLVAMYKKIYRGDFKCPPWFSLEARRLVTKLLDPNPNTRISISKVMECSWFKKSMVRAKEEEEFELEEKLERERPKSMNAFHIISLSEGFDLSPLFEEKKREEREEMRFATAGTASSVISRLEEVAKAVKFDVKSSENKVRLQGQERGRKGKLAIAADIYAVTPSFLVVEVKKDKGDTLEYNQFCSKELRPALKDILWTSPENSTPASA* 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g2705 430 ProSitePatterns Protein kinases ATP-binding region signature. 24 51 IPR017441 GO:0005524
Apr9g2705 430 Gene3D Transferase(Phosphotransferase) domain 1 98 279 - -
Apr9g2705 430 PANTHER - 10 425 - -
Apr9g2705 430 ProSiteProfiles NAF domain profile. 294 318 IPR018451 GO:0007165
Apr9g2705 430 Pfam Protein kinase domain 18 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr9g2705 430 Pfam NAF domain 296 355 IPR004041 GO:0007165
Apr9g2705 430 CDD CIPK_C 300 415 - -
Apr9g2705 430 CDD STKc_SnRK3 17 271 - -
Apr9g2705 430 SUPERFAMILY Protein kinase-like (PK-like) 15 309 IPR011009 -
Apr9g2705 430 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 10 425 - -
Apr9g2705 430 SMART serkin_6 18 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr9g2705 430 ProSitePatterns Serine/Threonine protein kinases active-site signature. 136 148 IPR008271 GO:0004672|GO:0006468
Apr9g2705 430 Gene3D Phosphorylase Kinase; domain 1 11 97 - -
Apr9g2705 430 Gene3D Kinase associated domain 1, KA1 293 420 - -
Apr9g2705 430 ProSiteProfiles Protein kinase domain profile. 18 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g2705 Apr-Chr9 34080913 34082792 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g2705 11 428 CBL-interacting serine-threonine protein kinases AT4G30960 75.758 0.0 639
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Apr9g2705 Pkinase 2.3e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g2705 - K07198 var:108321114 731.865