Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g2702 ATGGCTATGCTCCGCAAATTGTTCTTTCGCAAGCCACCTGATGGCCTTCTCGAGATCTGCGAGCGAGTTTACGTTTTTGATTGCTGCTTCACGACGGATGCTTGGGATGAAGGGAATTACAAATTGTACATGGATGGGATAGTAGGTCAACTTAGAGAGAACTTACCTGATGCTTCAATTCTGGTTTTTAATTTCCGCGAGGAAAATACCAAGAGTCAAATGGCACATATAATGTCTGAGTATGATATTACTATAATGGACTATCCTCGGCACTATGAGGGTTGTCCTGTGCTCAAAATGGAGCTCATTCATCACTTTTTGAGGTCTGGTGAAAGCTGGCTCTCGCTTGGGCAGCATAATGTGTTGTTGATGCATTGTGAACGTGGTGGTTGGCCTGTTTTGGCTTTCATGTTGGCTGCATTGTTGATTTATAGAAAGGTTTATAGTGGGGAACAGAGGACTTTGGATATGGTTCACAGGCAGGCTCCGAGTGAGCTGTTGCATTTGTTGGCGCCGTTGAATCCGATCCCTTCCCAACTGCGGTATCTGCAGTATGTTTCCAGGAGGAATGTGGCCATAGATTGGCCTCCACTGGACAGGGCACTCATGTTGGACTGCATCATTCTCAGATTCTTTCCAAACTTTGATGGGGAAGGTGGTTGTCATCCCGTGTTTAGAATTTATGGACCGGATCCTTTTAGTGCTGATAAAAATCCAAAAAAGTTGTATTCAACTCCAAAGAGAAGCAAAAATGTCCGGACTTATAAGCAGGGAGAGTGTGAACTAATTAAAATTGACATCAATTGCCATATTCAAGGTGATGTTGTGGTTGAGAGTATTAACTTGAATGGTGACATAGAGCATGAAAAGATGATGTTCCGAGTCATGTTCAACACGGCTTTTGTTAGATCTAATATTTTGATGCTTAACCGGGACGAAATTGACATTTTATGGGATGCTAAAGATCACTTTCCAAAAGATTTTAGAGCTGAGATCCTTTTCTCAGAGATGGATGCTGCTGCAGCAGTTATGGCGGAAGGTACATCGTGCTTTGAGGAGAAGGAGGGTCTGCCAATGGAAGCATTTGCTAAGGTTCAAGAGATCTTTAGTCATGTAGACTGGATGAGCCCCAAGGCAGATGCAGCACTAAATGTTCTCCAGCAGATAAGTGCTTCGGCTATGAACGACATGTTGGATACAGTTTCTGATCAGCAGATGGAAACTGGTACTTTGCATAAAACAGGTTCTAGAATGCCTCAGGGGAATATGAATGAAGCCATGCAGTCTTTATCCTCAACTATGCAATCCCTAGACAATTATATGAGTAGAAAAGAGGATAGGAACAACAAGGTTGAGGCTACTGCACAACAACCTAGTACGTCTGACTTCATCTGTCAAGAGATGTCCAGCTCTTCTGAAAGAACCTTGGAATCCAGTAAATGTCCAACTGAATCTACAAATCTTGGCATAAAACTGCAGGCATCTGATCCTCTCTTATCTCGTTCTGTTGATTCTTCTCTTTCCCCTCAAACACCTCCTTTGCGGCCTCCCTCCACTAGGTGTGCTAATAAAGTTCATGATTCTCCTCCTCACACAGAATCACCACCTCACCTTTCGCCATTGCAATCAAGACACCAGTCACAAGAGAGAAGTCATTCATTTGTTTCTAGCCCTATACCAGGGACCCAATTGTCATCTAGTTTTAGCAGTAAGTCACCAGCTGACATCACTTCCCATCCATCAATTTCAGCAACTACTTCAACTCAGCCATCTCATTCACTTTCTTCCATAACACATGCAAATAAGATTCTACCTATTAGAACAAGACTACAGTCTTCACCTTCACAACCTCCACCACCTCCTACCCCTCCACTAAAGAATCCCAAACTAGTTAGAGTTGGACCTCCTCCACCTCCACCACCTCCTCCAAAGAAGGAACTAAATGTTAACGCTGGATCCTTTACTCCTCCTTCATCTCCCATGAATGAGGAGCCACAGGTTAGAGATAGACACGCTCCTCCTGCTCCCCCTCCCCCTCCCCCACCCCCTCTTCTAAAAGAGGAGCAACCTGTTAGGTTTACGCCTCCACCACCTCCACCACCTCCTTGTCTTTCTGGAAAAGCTGCAGGTCCCACCATAGTGCCAGCAGCATCAGCACCACCACCACCAGCACCTCCACCACCACTTTCCTCAGGTCACTCTAGTTCTTCATTGCTAAAGTCCACATCTGCTCCTACAGCACCAGCTGCTCCACCTCCTCCAATTCCCTTTGGTAAAGGAGGTCTCAAACCAGCCAATGCTTTTCCATTGTCTCTTTTTGGGGCTGGTGATGGAAATAACGTGTCAGGTACAACCGGACCTCAATCTGGTTTAGCAACTGGCTCAAAGGGACGAATTCTATCACGTACAATTAACTCTAAGAATAACAGCAAAAAGTTGAAGCCATTGCATTGGTTGAAACTATCTAGAGCTGTGCAAGGAAGTTTGTGGGCTGAGACACAGAAATCTGGTGAAGCTTCCAAAGCCCCAGAGATTGATATTTCAGAGCTTGAGAGTCTCTTCTCAGCAGCAGTCCCAAGTTCAGGTCCTGCCAAGAAGTTAAATCTCCAAAGCTCGGTTGGGCCTAAAAATGATAAAGTGCAGCTGATTGACCATAGACGAGCATATAATTGTGAAATTATGCTTTCAAAAGTGAAAGTGCCGTTGCATGATTTAATGAGCTCAGTGCTAGCATTGGAAGAGTCAGCACTAGACATTGATCAGGTTGAGAACCTCATAAAGTTTTGTCCTACAAAAGAGGAGATGGAATTACTAAAGGGTTATAATGGGGAAAAGGAGAAGTTAGGGAGATGTGAACAGTTCTTCACGGAGTTGATGAAAGTACCACGAGTAGAATCCAAGCTCAGAGTTTTTTCATTCAAGATTCAGTTCCACGCACAGGTTTCTGAACTTGGAAATAGCTTGAATGTCGTAAATGCTGCTGCAGAAGAGATCAGGAATTCTGTCAAATTAAAGAGAATTATGCAAACAATACTTTCTTTAGGAAATGCTTTGAACCAAGGAACTGCCAGAGGTTCTGCTATTGGATTCAGATTGGATAGCCTTCTTAAACTCACTGAGACGCGCGCAAGGAACAACAAGATGACTCTCATGCATTATCTTTGTAAGGTGCTAGTTGACAAGCTACCAGAAGTTTTAGACTTCTCCAAGGACCTTGGAAACCTAGAGCCAGCAGCAAAGATCCAATTGAAGTATTTGGCCGAGGAGATGCAAGCTATAAACAAAGGATTAGAGAAAGTGATACAGGAACTATCAACCTCGGAAAATGATGGACCTATATCAGAAACTTTCGGCAAAAAATTGAAAGAGTTCCTCTGTTCTGCTGAAGCTGAAGTCCGTTCATTGGCTTCACTATATTCTAGTGTGGGTAGGAATGTGGATGCGTTGATTCTTTATTTTGGTGAAGATCCATCCCGCTGCCCATTTGAGCAAGTTGTATCAACTCTACTCAACTTTACTAGAATGTTTAACAAAGCCCATGAAGAAAACTGCAAGCAGCACGAGCTTGAAATGAAGAAAGCAGCAGAAAGTGAGAAAAAGAAGTGTGAATCAGAAAGAATATTACCTACAGCTATCCGGACTGGCAATGTCAAATAA 3657 0.4356 MAMLRKLFFRKPPDGLLEICERVYVFDCCFTTDAWDEGNYKLYMDGIVGQLRENLPDASILVFNFREENTKSQMAHIMSEYDITIMDYPRHYEGCPVLKMELIHHFLRSGESWLSLGQHNVLLMHCERGGWPVLAFMLAALLIYRKVYSGEQRTLDMVHRQAPSELLHLLAPLNPIPSQLRYLQYVSRRNVAIDWPPLDRALMLDCIILRFFPNFDGEGGCHPVFRIYGPDPFSADKNPKKLYSTPKRSKNVRTYKQGECELIKIDINCHIQGDVVVESINLNGDIEHEKMMFRVMFNTAFVRSNILMLNRDEIDILWDAKDHFPKDFRAEILFSEMDAAAAVMAEGTSCFEEKEGLPMEAFAKVQEIFSHVDWMSPKADAALNVLQQISASAMNDMLDTVSDQQMETGTLHKTGSRMPQGNMNEAMQSLSSTMQSLDNYMSRKEDRNNKVEATAQQPSTSDFICQEMSSSSERTLESSKCPTESTNLGIKLQASDPLLSRSVDSSLSPQTPPLRPPSTRCANKVHDSPPHTESPPHLSPLQSRHQSQERSHSFVSSPIPGTQLSSSFSSKSPADITSHPSISATTSTQPSHSLSSITHANKILPIRTRLQSSPSQPPPPPTPPLKNPKLVRVGPPPPPPPPPKKELNVNAGSFTPPSSPMNEEPQVRDRHAPPAPPPPPPPPLLKEEQPVRFTPPPPPPPPCLSGKAAGPTIVPAASAPPPPAPPPPLSSGHSSSSLLKSTSAPTAPAAPPPPIPFGKGGLKPANAFPLSLFGAGDGNNVSGTTGPQSGLATGSKGRILSRTINSKNNSKKLKPLHWLKLSRAVQGSLWAETQKSGEASKAPEIDISELESLFSAAVPSSGPAKKLNLQSSVGPKNDKVQLIDHRRAYNCEIMLSKVKVPLHDLMSSVLALEESALDIDQVENLIKFCPTKEEMELLKGYNGEKEKLGRCEQFFTELMKVPRVESKLRVFSFKIQFHAQVSELGNSLNVVNAAAEEIRNSVKLKRIMQTILSLGNALNQGTARGSAIGFRLDSLLKLTETRARNNKMTLMHYLCKVLVDKLPEVLDFSKDLGNLEPAAKIQLKYLAEEMQAINKGLEKVIQELSTSENDGPISETFGKKLKEFLCSAEAEVRSLASLYSSVGRNVDALILYFGEDPSRCPFEQVVSTLLNFTRMFNKAHEENCKQHELEMKKAAESEKKKCESERILPTAIRTGNVK* 1219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g2702 1218 Gene3D Formin, FH2 domain 801 1188 IPR042201 -
Apr9g2702 1218 MobiDBLite consensus disorder prediction 612 646 - -
Apr9g2702 1218 Pfam C2 domain of PTEN tumour-suppressor protein 200 336 IPR014020 -
Apr9g2702 1218 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 201 337 IPR035892 -
Apr9g2702 1218 Coils Coil 1087 1107 - -
Apr9g2702 1218 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 13 187 IPR029021 -
Apr9g2702 1218 MobiDBLite consensus disorder prediction 443 462 - -
Apr9g2702 1218 MobiDBLite consensus disorder prediction 467 489 - -
Apr9g2702 1218 MobiDBLite consensus disorder prediction 671 706 - -
Apr9g2702 1218 PANTHER FORMIN-J 1 1202 - -
Apr9g2702 1218 MobiDBLite consensus disorder prediction 501 768 - -
Apr9g2702 1218 Gene3D - 199 340 - -
Apr9g2702 1218 Gene3D Protein tyrosine phosphatase superfamily 15 198 IPR029021 -
Apr9g2702 1218 SUPERFAMILY Formin homology 2 domain (FH2 domain) 720 1194 - -
Apr9g2702 1218 MobiDBLite consensus disorder prediction 715 730 - -
Apr9g2702 1218 Coils Coil 1177 1205 - -
Apr9g2702 1218 SMART PTEN_C2_2 197 336 IPR014020 -
Apr9g2702 1218 SMART it6_source 803 1218 IPR015425 -
Apr9g2702 1218 ProSiteProfiles C2 tensin-type domain profile. 199 337 IPR014020 -
Apr9g2702 1218 Pfam Formin Homology 2 Domain 807 1176 IPR015425 -
Apr9g2702 1218 ProSiteProfiles Formin homology-2 (FH2) domain profile. 803 1202 IPR015425 -
Apr9g2702 1218 MobiDBLite consensus disorder prediction 537 611 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g2702 Apr-Chr9 34052154 34063005 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g2702 778 1201 Protein tyrosine phosphatase (PTP) family AT5G58160 74.648 0.0 625
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g2702 - - aprc:113848377 2258.03