Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g2698 ATGGGTTTGGGAGTGTTCGGTTTTGTTTTGGTTTTGACTCTCTTGTTCAAGCATTTGGTGTCTCAGCAACCAAACACTGATGAGTTCTTTGTATCGGAGTTCTTGAAGAAGATGAGTTCAAGTTCAACATCTACCCAAGCCTACAACTTCTCTGCTTCTGTTTGTTCCTTGCAAGGAGTATTATGTGATGCCAATAGAGAACACGTTGTTGAGTTGAGCTTTTCTGGTATGGACCTCTCTGGAACTATACCTGATAACACCATAGGCAAGCTCAGCAAACTCCAATCTTTGGATCTTAGTTATAATAAAATCACTGGTTTGCCTTCAGATTTTTGGTGTTTAAGCTCTCTCAAGACCCTTAACCTCTCCTCCAATCAGATTTCAGGTTCATTGACTAACAACATTGGCAACTTTGGTTTACTAGAAAGCATTGACTTGTCCAGCAACGATTTTTCTGAGGAAATTCCTGAAGCTATTGGCTCCCTTGTGAGTCTGAGGGTCCTCAAACTTAACCACAACAGGTTTGCACAGAACGTACCTTCTGGAATTCTCAAGTGCCAGAATCTAGTTTCAATTGATCTTTCATCAAATCAGCTGAATGGAACACTACCAGATGGTTTTGGTGCTGCTTTTCCTAAGCTTAGGACTTTGAACCTTTCAGGGAATAATATTTATGGCCGTATTTTAGATATTTCTGGATTAAAATCTATTCTGAATCTCAACATGTCAGGGAATTCATTTCAGGGTTCTATTATGGGTTTGTTTCAGGAAAAGTTGGAGGTCCTGGACCTTAGCAGAAACCAATTTCAAGGTCACATTCCTCAGGTACAGTACAACTTTAGTAGTTACAATTGGTCTCATTTAGTTTATCTGGATTTGTCAGAGAATCAGCTTAGTGGGGAAATTTTTCAAAATTTTGATGTGTCCTTGAATCTAAAGCACCTTAACCTTGCACAAAATAGATTTAACAGGCAGAAATTCCCACAGATTGAAATGCTCCTGGGATTGGAATATCTGAACTTGTCCAAAACTAGTCTTGTTGGTCAAATTCCTGATGAAATCTCACAACTGAGTAATTTGAATGCAATTGATCTTTCTATGAATCATCTTAGTGGGAAAATTCCCTTACTGGGGAATAAGCGCCTCCAAGTTCTTGACCTTTCAAACAACAATTTGACTGGAGCAGTCCCTCTACCCGTCCTAAAGAAACTTCCATGGATGGAGAAATTCAACTTCTCGTACAATAACTTAACCCTCTGTGCTTCAGATATCAAACCTGATATCCTGAAAACAGCATTCTTTGGATCGTTGAACAGTTGTCCACTTGCTGCAAACCCAAGACTTTTCAAAAGAAGAGACACTGGACACAAGGGAATGAAGCTAGCCCTTGTGTTGTCCTTCTCAATGCTGTGTGTGCTTGCTGGCCTTTTATTTCTAGCATTTGGTTGCAGAAAGAAAACAAAAATGTGGAAAGTGAAGCAAAGTTCATACAAAGAAGAACAGAACATTTCAGGTCCCTTTTCATTCCACACTGATTCAACAACTTGGGTGGCTGATGTTAAGCAAGCAACATCAGTCCCAGTAGTAATCTTTGAGAAGCCATTATTGAATATCACATTTGCAGACCTCTTATATGCTACTTCAAACTTTGATAGAGGTACCCTTTTGGCTGAAGGAAAATTTGGTCCTGTCTATAGAGGCTTTCTGCCAGGTGGTATTCATGTGGCAGTTAAGGTCTTGGTTGTTGGTTCTACATTGACAGATGAAGAAGCTGCAAGAGAACTTGAGTTTCTTGGCAGAATAAAGCACCCAAATCTTGTTCCCTTAACTGGATATTGTGTGGCTGGTGATCAGAGAATTGCCATATATGACTACATGGAAAATGGAAACTTGCAAAACTTGCTTTATGACTTGCCACTCGGTGTACAAAGCACTGAAGACTGGAGCACAGACACATGGGATGAAGGTAACAACAATGGAATTCAAAATGCTAGCTCTGAAGGGTTGCTCACATCTTGGAGATTTCGCCACAAAATAGCCCTTGGCACGGCTCGAGCATTGGCATTTTTGCACCATGGTTGCTCACCTCCAATAATCCATAGAGCTGTTAAAGCTAGCAGTGTTTATTTGGATTATGACTTGGAGCCAAGGTTGTCTGATTTTGGGTTGGCTAAGATTTTTGGAAGTGGTTTAGATGAGGAGATTGCACGTGGCTCACCTGGTTATGTTCCACCGGAGTTTTCTCAACCAGACTTTGGCACTCCAACACCAAAATCTGATGTGTACTGTTTTGGAGTTGTTCTCTTTGAGCTAGTAACTGGAAAGAAACCAGTTGATGATGATTACCCTGATGATAAAGATGCAACTTTGGTAAGTTGGGTTAGAGGGCTTGTAAGAAAGAACAAAGCTTCAAGAGCTATTGATCCCAAAATTCGTGATACAGGATCTGATGAACAAATGGAAGAGGCTCTTAAGATTGGTTATCTTTGCACTGCTGATCTACCCTTCAAGCGACCAAGCATGCAACAGATAGTTGGACTCCTAAAGGATATTGAACCTACTTCTAGTTAG 2571 0.4045 MGLGVFGFVLVLTLLFKHLVSQQPNTDEFFVSEFLKKMSSSSTSTQAYNFSASVCSLQGVLCDANREHVVELSFSGMDLSGTIPDNTIGKLSKLQSLDLSYNKITGLPSDFWCLSSLKTLNLSSNQISGSLTNNIGNFGLLESIDLSSNDFSEEIPEAIGSLVSLRVLKLNHNRFAQNVPSGILKCQNLVSIDLSSNQLNGTLPDGFGAAFPKLRTLNLSGNNIYGRILDISGLKSILNLNMSGNSFQGSIMGLFQEKLEVLDLSRNQFQGHIPQVQYNFSSYNWSHLVYLDLSENQLSGEIFQNFDVSLNLKHLNLAQNRFNRQKFPQIEMLLGLEYLNLSKTSLVGQIPDEISQLSNLNAIDLSMNHLSGKIPLLGNKRLQVLDLSNNNLTGAVPLPVLKKLPWMEKFNFSYNNLTLCASDIKPDILKTAFFGSLNSCPLAANPRLFKRRDTGHKGMKLALVLSFSMLCVLAGLLFLAFGCRKKTKMWKVKQSSYKEEQNISGPFSFHTDSTTWVADVKQATSVPVVIFEKPLLNITFADLLYATSNFDRGTLLAEGKFGPVYRGFLPGGIHVAVKVLVVGSTLTDEEAARELEFLGRIKHPNLVPLTGYCVAGDQRIAIYDYMENGNLQNLLYDLPLGVQSTEDWSTDTWDEGNNNGIQNASSEGLLTSWRFRHKIALGTARALAFLHHGCSPPIIHRAVKASSVYLDYDLEPRLSDFGLAKIFGSGLDEEIARGSPGYVPPEFSQPDFGTPTPKSDVYCFGVVLFELVTGKKPVDDDYPDDKDATLVSWVRGLVRKNKASRAIDPKIRDTGSDEQMEEALKIGYLCTADLPFKRPSMQQIVGLLKDIEPTSS* 857
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g2698 856 Gene3D Ribonuclease Inhibitor 281 378 IPR032675 -
Apr9g2698 856 Gene3D Ribonuclease Inhibitor 26 180 IPR032675 -
Apr9g2698 856 Gene3D Ribonuclease Inhibitor 379 428 IPR032675 -
Apr9g2698 856 SMART LRR_typ_2 91 113 IPR003591 -
Apr9g2698 856 SMART LRR_typ_2 333 357 IPR003591 -
Apr9g2698 856 SMART LRR_typ_2 211 236 IPR003591 -
Apr9g2698 856 SMART LRR_typ_2 162 186 IPR003591 -
Apr9g2698 856 SMART LRR_typ_2 187 210 IPR003591 -
Apr9g2698 856 SMART LRR_typ_2 114 138 IPR003591 -
Apr9g2698 856 Pfam Protein tyrosine and serine/threonine kinase 554 846 IPR001245 GO:0004672|GO:0006468
Apr9g2698 856 ProSiteProfiles Leucine-rich repeat profile. 381 402 IPR001611 GO:0005515
Apr9g2698 856 SUPERFAMILY Protein kinase-like (PK-like) 535 848 IPR011009 -
Apr9g2698 856 Gene3D Transferase(Phosphotransferase) domain 1 626 856 - -
Apr9g2698 856 Gene3D Ribonuclease Inhibitor 181 280 IPR032675 -
Apr9g2698 856 ProSiteProfiles Leucine-rich repeat profile. 213 235 IPR001611 GO:0005515
Apr9g2698 856 SUPERFAMILY L domain-like 47 418 - -
Apr9g2698 856 Pfam Leucine Rich repeat 212 224 IPR001611 GO:0005515
Apr9g2698 856 Pfam Leucine Rich repeat 379 394 IPR001611 GO:0005515
Apr9g2698 856 PRINTS Leucine-rich repeat signature 94 107 - -
Apr9g2698 856 PRINTS Leucine-rich repeat signature 114 127 - -
Apr9g2698 856 PANTHER CONCANAVALIN A-LIKE LECTIN/GLUCANASE DOMAIN-CONTAINING PROTEIN-RELATED 1 853 - -
Apr9g2698 856 Gene3D Phosphorylase Kinase; domain 1 510 625 - -
Apr9g2698 856 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 1 853 - -
Apr9g2698 856 Pfam Leucine rich repeat 82 127 IPR001611 GO:0005515
Apr9g2698 856 ProSiteProfiles Leucine-rich repeat profile. 93 114 IPR001611 GO:0005515
Apr9g2698 856 ProSiteProfiles Protein kinase domain profile. 550 855 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g2698 Apr-Chr9 34012655 34015914 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g2698 64 855 Receptor kinase-like Gene Family AT4G39400 34.852 8.68e-116 379
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-2 Apr9g2698 PK_Tyr_Ser-Thr 3.8e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g2698 - - gmx:100787157 1481.08