Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g2696 ATGGCTGAGCGCCGCAGCTCCGAAGCTCTCCCAGCGGAAGCTCCGCAGCTCCATCCAAAACCAAACGATTCTCAAGATAAAGCGGAAAACACCAAGGAACGAGTCGCTGAATCGCCGTCCGCTGCTGAGTCGCAGCGCGACGAGTTACCGAGTCCTAACGACCCTCGTACGGAGTCCAATTTAGAAACCCTAGCTGCCGTTCCCTCTTTGGTTGAATCCCTTGCTGTGCAGCACCGGAGTGACGATGTGCAGGGGAGCTCTACTACGCTGAGTTCGGGTGACAAAGCCGAAAGTAAGGAGACAGTTGGACCTCCTGAAAAGGAAATTATTGCAAGAGGAGCAGCCCAAACACTTCAAAGTCAGACAGAAAATCAGCTTCAGGTGTCTGTGTGTTCAACTCCATTGTCTGAACGATCACCAACTTCTGTTACACAATCTTTATCATCTGTTTCTAGTCCAACTGTACGAAAACTGAAAATATCTACTACTCCAAAGGTTAATAACGTGCATGTGCCAGAAGAAGATAAAAAAAATCCTTCTGGTGGTAAAACCTTATCTGCTGTTTCTGTTGCAAGGACATCAGGATCTGATGGATACAACTGGCGGAAGTATGGTCAGAAGCAAGTGAAGAGTCCTACAGGTTCTCGAAGCTATTACAGGTGTACTCATGCAGACTGTTGTGCTAAGAAGATTGAATGCTGTGATCATTCAGGTCATGTGATAGACATTGTTTACAAAAGTGACCACAGTCATGATCCTCCGCGGAAGACTAATTCCATTAGGGAAAGTAAGTTGCAGTCTTCCAGTGAACCTACTTTGGAAAACAGTGTTACTGAGCAGCCTGTCAAAGTTCTAAAGGATCCTGATTCATCCATTTCTTCAAAAGAACTTCTACAAGAAACACCCAGCAGTGCTGATAAGAAACGGCAAAACTCATCTAATATCAGTGATAATGGTAAAGTTATTTTGGAGGAACATGAAAATGAGGCAGAGCCAAAAAAAAGGATGAAGAAAGGTGACTTAACAGACATGGATTCTCCCGGAAAACCTGGAAAGAAGCCCAAGCTTGTTGTACATGCAGCAGGGGATGTGGGGATCTCTGGTGATGGTTACCGATGGCGCAAGTATGGACAGAAAATGGTGAAGGGGAATCCACATCCCAGGAACTACTACAGATGCACTTCTGCTGGATGTCCTGTCAGAAAGCACATTGAGATCGCTGTAGATAACTCAGATGCTGTCATCATAACATACAAGGGTGTACATGACCATGACATGCCTGTGCCCAAGAAACGACATGGCCCACCAAGTGCTCCTCTTGTGGCTGCTGCAGCACCTGCCTCCATGAGCAGTTTGCAGTTGAAGAAATCCGACTCCCCGCAAAACCAGAAAGTTTCTACTCAATGGTCAGTGGATACTGAAGGAGAACTAACTGGGGAAGCCCTGGACCTTGGGGGTGAGAAAGCAATGGAGTCGGCTCGAACACTACTGAGCATAGGCTTCTTGTGGAACAGTTGGTGTGTATTTGCTTGTACACCCGTTCAACTTGTCTGA 1554 0.4653 MAERRSSEALPAEAPQLHPKPNDSQDKAENTKERVAESPSAAESQRDELPSPNDPRTESNLETLAAVPSLVESLAVQHRSDDVQGSSTTLSSGDKAESKETVGPPEKEIIARGAAQTLQSQTENQLQVSVCSTPLSERSPTSVTQSLSSVSSPTVRKLKISTTPKVNNVHVPEEDKKNPSGGKTLSAVSVARTSGSDGYNWRKYGQKQVKSPTGSRSYYRCTHADCCAKKIECCDHSGHVIDIVYKSDHSHDPPRKTNSIRESKLQSSSEPTLENSVTEQPVKVLKDPDSSISSKELLQETPSSADKKRQNSSNISDNGKVILEEHENEAEPKKRMKKGDLTDMDSPGKPGKKPKLVVHAAGDVGISGDGYRWRKYGQKMVKGNPHPRNYYRCTSAGCPVRKHIEIAVDNSDAVIITYKGVHDHDMPVPKKRHGPPSAPLVAAAAPASMSSLQLKKSDSPQNQKVSTQWSVDTEGELTGEALDLGGEKAMESARTLLSIGFLWNSWCVFACTPVQLV* 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g2696 517 MobiDBLite consensus disorder prediction 20 41 - -
Apr9g2696 517 MobiDBLite consensus disorder prediction 247 355 - -
Apr9g2696 517 ProSiteProfiles WRKY domain profile. 196 254 IPR003657 GO:0003700|GO:0006355|GO:0043565
Apr9g2696 517 PANTHER WRKY TRANSCRIPTION FACTOR 32-RELATED 1 502 - -
Apr9g2696 517 MobiDBLite consensus disorder prediction 292 319 - -
Apr9g2696 517 Pfam WRKY DNA -binding domain 369 424 IPR003657 GO:0003700|GO:0006355|GO:0043565
Apr9g2696 517 Pfam WRKY DNA -binding domain 197 251 IPR003657 GO:0003700|GO:0006355|GO:0043565
Apr9g2696 517 Gene3D WRKY domain 352 428 IPR036576 GO:0003700|GO:0006355|GO:0043565
Apr9g2696 517 Gene3D WRKY domain 183 255 IPR036576 GO:0003700|GO:0006355|GO:0043565
Apr9g2696 517 MobiDBLite consensus disorder prediction 320 352 - -
Apr9g2696 517 SUPERFAMILY WRKY DNA-binding domain 193 254 IPR036576 GO:0003700|GO:0006355|GO:0043565
Apr9g2696 517 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 1 502 IPR044810 GO:0003700
Apr9g2696 517 ProSiteProfiles WRKY domain profile. 362 427 IPR003657 GO:0003700|GO:0006355|GO:0043565
Apr9g2696 517 MobiDBLite consensus disorder prediction 260 279 - -
Apr9g2696 517 SUPERFAMILY WRKY DNA-binding domain 363 427 IPR036576 GO:0003700|GO:0006355|GO:0043565
Apr9g2696 517 MobiDBLite consensus disorder prediction 114 150 - -
Apr9g2696 517 MobiDBLite consensus disorder prediction 1 150 - -
Apr9g2696 517 SMART WRKY_cls 195 253 IPR003657 GO:0003700|GO:0006355|GO:0043565
Apr9g2696 517 SMART WRKY_cls 367 426 IPR003657 GO:0003700|GO:0006355|GO:0043565
Apr9g2696 517 MobiDBLite consensus disorder prediction 79 96 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g2696 Apr-Chr9 33991747 33998291 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g2696 142 501 WRKY Transcription Factor Family AT4G30935 57.025 3.25e-127 377
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Apr9g2696 WRKY 3.6e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g2696 - - aprc:113845981 988.023
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g2696 9 33991747 33998291 Apr9g2696 9 33991747 33998291 ECH