Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g2691 ATGTTTGATTACAAGTCAGAGTACATGGGTGGCCAGAGGGAAAATTTTTTGAGGTTGGATACCTTGGATTCCAGACTGTCTTCAACTTCTGATGCTGGGGTTATGAAATCTGGATTTAGTATTGATAAATTAAGTCATGGTGGTCATGGAAACAGCACAACCTCTAGGTCTTTTAAAAGAGGAATGAGAAGGGGATCTGAAGGACTGAAGTCAATAGGGCGATCACTTGGGTTGGGAGTATCTAGGGCTGTGTTCCCAGAAGATCTTAAAGTATCAGAGAAGAAGATATTCGATCCTCAGGACAAACTTTTGCTCTTATGGAATAAGCTTTTTGTTATCTCATGCATTTTGGCTGTGTCAGTGGATCCATTGTTTTTTTATCTTCCTGTCATCAATGATCCATCTCACTGTCTTGGCATAGACCAAAAGTTGGCAACAATAGTTACAACCTTAAGAACAGTTATTGATGGTTTCTATCTTATACACATGGCCCTCCAATTTCGTACTGCTTATATTGCTCCATCTTCTCGTGTCTTTGGGCGGGGTGAGCTTGTGATAGATTCGGCACAGATAGCCAAGCGATACTTGCGGCGGTATTTCATCATTGATTTCCTGTCTGTGTTGCCGATACCGCAGATTGTGGTTTGGACATTTCTTCATAGGTCAAAAGGTTCAGAGGTACTAGCAACAAAGCAAGCCTTGATGTTCATTATCTTGCTTCAGTATGTTCCTAGATTTCTTCGAATGGTACCATTGACTTCAGAGCTCAAGAGAACAGCTGGTGTCTTTGCCGAAACTGCATGGGCAGGTGCTGCATATTATTTGCTGTTATACATGCTTGCCAGTCATATAGTTGGTGCTTTTTGGTACTTGTTAGCTATTGAACGAAATCAATCATGCTGGCAGAAGGCATGTAGTGACAATGGGTACAATAAAAACTTCCTATATTGTGGGAACCAGCACCTGGAAGGTTATAGTGCCTGGAATAATACAAGTGAATCTATTCTTAAGTCAAACTGCTCTGCAGATGGTGATCCTCCACCTTTTGATTTTGGAATTTTTACGCAAGCAATGTCATCTGGCATCATTTCATCTAAGAAGTTCATCTCCAAATACTGTTACTGTTTATGGTGGGGGCTCCAGAATTTGAGTACACTTGGCCAGGGGCTTCAAACTAGCACCTATCCTGGGGAGGTTATCTTTTCAATAGCACTTGCTATATCCGGCCTCATCCTCTTTGCACTTCTTATTGGCAACATGCAGACATATCTTCAGTCTCTTACCATTAGGCTCGAGGAAATGAGAGTCAAAAGGCGCGATTCAGAACAGTGGATGCATCACCGCCTGCTCCCACAAGATCTTAGGGAGCGTGTGAGACGGTATGATCAATATAAGTGGCTGGCAACACGTGGTGTAGATGAAGAAAATTTAGTTCAGAGTCTACCTAAGGATCTTAGAAGAGATATTAAGCGTCATCTCTGTTTGGCCTTAGTGAGGAGGGTTCCACTATTTGAGAGTATGGATGAGAGATTGCTTGATGCCATATGTGAGAGGCTGAAACCATGTTTATTTACAGAGAATACTTACATTGTTCGGGAAGGAGATCCAGTTGATGAGATGCTTTTCATCATACGTGGTCGCCTGGAGAGTGTTACCACAGATGGTGGGAGGAGTGGATTTTTCAACCGCAGTTTTCTAAAAGAAGCTGACTTTTGTGGGGAGGAGCTTTTAACCTGGGCCCTGGATCCTAAATCTGGTTCTAATCTTCCATCTTCTACTCGAACAGTTAAGGCATTAACAGAGGTTGAGGCTTTTGCCTTAACTGCCGATGAATTAAAATTTGTTGCCAGCCAGTTTAGGCGCCTTCACAGTAGACAGGTTCAACACACTTTCCGTTTTTACTCTCAACAATGGAGGACTTGGGCTGCATGCTTTATTCAAGCAGCATGGCGTCGGTATTCTAAAAAGAAAATAATGAAGCTTCGTCTAAAGGAAGAAGATGCTGATGAGTCAGAAGGAACTCATGAAAATGCTGGTGGCAGTTCCTACAGCTTTGGTGCTGCCTTGTTAGCCTCAAAGTTTGCTGCACACACACTTCGTGGTGTACACCGCAATCGAATTGCTAAGACTGCCAGGGAGTTAGTGAAACTACAGAAACCCCCTGAGCCTGACTTTACTGCAGATGCAGACTAA 2193 0.4286 MFDYKSEYMGGQRENFLRLDTLDSRLSSTSDAGVMKSGFSIDKLSHGGHGNSTTSRSFKRGMRRGSEGLKSIGRSLGLGVSRAVFPEDLKVSEKKIFDPQDKLLLLWNKLFVISCILAVSVDPLFFYLPVINDPSHCLGIDQKLATIVTTLRTVIDGFYLIHMALQFRTAYIAPSSRVFGRGELVIDSAQIAKRYLRRYFIIDFLSVLPIPQIVVWTFLHRSKGSEVLATKQALMFIILLQYVPRFLRMVPLTSELKRTAGVFAETAWAGAAYYLLLYMLASHIVGAFWYLLAIERNQSCWQKACSDNGYNKNFLYCGNQHLEGYSAWNNTSESILKSNCSADGDPPPFDFGIFTQAMSSGIISSKKFISKYCYCLWWGLQNLSTLGQGLQTSTYPGEVIFSIALAISGLILFALLIGNMQTYLQSLTIRLEEMRVKRRDSEQWMHHRLLPQDLRERVRRYDQYKWLATRGVDEENLVQSLPKDLRRDIKRHLCLALVRRVPLFESMDERLLDAICERLKPCLFTENTYIVREGDPVDEMLFIIRGRLESVTTDGGRSGFFNRSFLKEADFCGEELLTWALDPKSGSNLPSSTRTVKALTEVEAFALTADELKFVASQFRRLHSRQVQHTFRFYSQQWRTWAACFIQAAWRRYSKKKIMKLRLKEEDADESEGTHENAGGSSYSFGAALLASKFAAHTLRGVHRNRIAKTARELVKLQKPPEPDFTADAD* 731
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g2691 730 SUPERFAMILY Voltage-gated potassium channels 99 425 - -
Apr9g2691 730 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 12 727 - -
Apr9g2691 730 CDD CAP_ED 503 634 IPR000595 -
Apr9g2691 730 Pfam Cyclic nucleotide-binding domain 524 614 IPR000595 -
Apr9g2691 730 ProSiteProfiles cAMP/cGMP binding motif profile. 503 587 IPR000595 -
Apr9g2691 730 SUPERFAMILY cAMP-binding domain-like 432 623 IPR018490 -
Apr9g2691 730 Gene3D - 109 428 - -
Apr9g2691 730 PANTHER NUCLEOTIDE-GATED ION CHANNEL, PUTATIVE-RELATED 12 727 - -
Apr9g2691 730 Gene3D Jelly Rolls 501 621 IPR014710 -
Apr9g2691 730 Gene3D Helix hairpin bin 431 494 - -
Apr9g2691 730 SMART cnmp_10 503 634 IPR000595 -
Apr9g2691 730 Pfam Ion transport protein 106 429 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Apr9g2691 730 ProSiteProfiles IQ motif profile. 639 668 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g2691 Apr-Chr9 33951039 33959359 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g2691 1 728 Ion Channels AT2G23980 75.300 0.0 1153
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g2691 K05391 - gmx:100784309 1318.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g2691 9 33951039 33959359 Apr9g2691 9 33951039 33959359 ECH