Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g2680 ATGCAGAAAGGTGATCAAACGGTGCTAAGCTTGAGGCCTGGTGGTGGTAGAGGAAGCAGGCTCCTCGGCCCTCGATTTGACTCCTCTTCATCCACCTCTTCTGCTTCTCCTGCTTTTGGCTCCTTTTCCGCTGATCTCCCTCTTTTGCGCCCTCATGGTGCTGCATCCTCTCCATTTTCTATCAAGGCTGGAGATTCGCGGTTTGAGGGTCGTGAACGTGTGCGATATACCAGAGATCAACTTTTACAGCTTAGAGAGGCTGCTGAGATCCTTGATGATGTTTTAAAGATCAAACAAGATATTGAAGCTGAACTTTTTGGTGAAGATCAAAGTTGGGGCCGCTCAGAAAACATTGTGAGTGTGTTTTCTCCCCCACAACAATTTCAAAATCGATATACTGAGCCAGATAACCGTGACTGGCGTGGCCGATCTGGGCAACTTCCCGCTAATGCAGATGAGAGGTCTTGGGACTATCTCAAGGAGAGTAGGGAGTTTGGCAATACTAATCAGGCTAATCGTCAAGACCAATTGAATTCTCAGTTTGCAAGGGCACAAATCTCTTCTAACCAAGGGGGGGGACCTACTTCTCTAGTCAAGGCTGAGGTGCCATGGTCAGCCAGAAGGGGAAGTCTCTCTGAAAAGGATCGTGTCTGGAAGACTGTTAAAGGAATACTGAATAAATTGACTCCTGAGAAATTTGATCTCCTGAAGGGTCAGTTGATTGATGCTGGCATTACATCAGCTGACATATTGAAGGGAGTCATTTCACTGATATTTGATAAGGCAGTGTTAGAGCCAACGTTTTGCCCCATGTATGCCCAGTTGTGTTCTGATCTTAATGAAAAGCTGCCTCCATTCCCTTCTGAGGTACCTGGTGGGAAAGAAGTCACTTTTAAGCGAGTACTCTTGAATATCTGCCAGGAGGCTTTTGAAGGTGCAGATAAACTGAGGGAAGAGGTGAGACAGATGACTGCTCCTGAGCAGGAGATGGAGCGACGGGACAAGGAAAGACTTGTCAAGCTTCGTACCCTTGGAAACATCCGGTTAATCGGTGAGCTGTTGAAGCAAAAAATGGTTCCTGAAAAGATTGTTCATCACATTGTTCAGGAGCTTTTAGGATCTCCTGACAGCAGGGTCTGCCCGGCTGAGGAAAATGTTGAAGCCATATGTCAATTTTTTAACACTATTGGTAAGCAGCTGGATGAAAGCCCAAAATCACGGCGTATAAATGATATGTACTTTAGTCGGTTGAAAGAATTGAGCACCAACCCCCAACTTGCACCACGGCTGAGGTTTATGGTTCGTGATGTTCTAGATTTGCGTAATAATAACTGGATTCCAAGACGTGAAGAGGTGAAAGCCAAAACCATCACTGAAATTCATTCAGAGGCAGAAAAAAATCTTGGACTGCGTCCTGGTGCCACTGCAAGTATAAGAAATAACCGTGGTGCAGTTTCTGGAGTTCAAGGAAATACCAACCCTGGAGGCTTCCCCCTTGCCAGACCTGGTACAGGGGGTTTGATGCCTGGGATGCCAGGGACCAGGAGGATGCCTGGGATGCCTGGAATTGATAATGACAACTGGGAGATGCCTAGGACAAGATCAATGCCAAGAGGAGACATGTCAGGCACGCAAACAGGGGGACGTGGCCAGTCTCCTTTCCTTTCCAAGTCATCAACTGTGAACACAAAGTTACTACCTCAAGGTAGTGGTGGTCTTATAAGTGGGAGAAATAGTGCCCTCGTGCATGGAGGTGGTGCTCCTGCTCCTCGTCCGTCAAACTTTAGTTTTGGTACTGAACCTGCTCCTCAAATTGCTTCACCTGTTAAAGCTGTTTCTGCCATATCCTCTGAGAAGCCACAAGCTCCAGCTGCCAAATTGAACACTGCTGATCTTCATCGTAAAGCTGTTTCTCTTCTGGAAGAGTATTTCAGTGTTAGGCTTTTGGATGAGGCATTACAGTGTGTGGAGGAACTAAAATCTCCGGCTTATTACCCTGAGCTTGTCAAGGAAGCCATTTCCCTTGCTCTAGACAAAAGTCCACCATGCGTTGAACCTGTTGCCAATCTTTTTGAGTATCTGTTCATGAAGAAAATTCTTTCAGCTAGAGACATAGGAACCGGGTGTATGTTATTTAGTTCTCTGCTGGATGATATTGGCATAGATTTACCTAAAGCACCAAATAATTTTGGTGAGATAATAGGGAAATTAATTTTGGCTGGGGGTTTGGATTTTAAGGTGGTGAGAGAAATACTGAAGAAGGTGGACGATGATCGGTTCCAGAAAGCAATATTTTCCTCTGCCCTGCAGGTAATTAGTTCTGCATCTGGACAAGCTGTGTTGGATTCACAAGCATCTGATATTGAGGCCTGCCAGAGCCTGTTCAAGTGA 2391 0.4588 MQKGDQTVLSLRPGGGRGSRLLGPRFDSSSSTSSASPAFGSFSADLPLLRPHGAASSPFSIKAGDSRFEGRERVRYTRDQLLQLREAAEILDDVLKIKQDIEAELFGEDQSWGRSENIVSVFSPPQQFQNRYTEPDNRDWRGRSGQLPANADERSWDYLKESREFGNTNQANRQDQLNSQFARAQISSNQGGGPTSLVKAEVPWSARRGSLSEKDRVWKTVKGILNKLTPEKFDLLKGQLIDAGITSADILKGVISLIFDKAVLEPTFCPMYAQLCSDLNEKLPPFPSEVPGGKEVTFKRVLLNICQEAFEGADKLREEVRQMTAPEQEMERRDKERLVKLRTLGNIRLIGELLKQKMVPEKIVHHIVQELLGSPDSRVCPAEENVEAICQFFNTIGKQLDESPKSRRINDMYFSRLKELSTNPQLAPRLRFMVRDVLDLRNNNWIPRREEVKAKTITEIHSEAEKNLGLRPGATASIRNNRGAVSGVQGNTNPGGFPLARPGTGGLMPGMPGTRRMPGMPGIDNDNWEMPRTRSMPRGDMSGTQTGGRGQSPFLSKSSTVNTKLLPQGSGGLISGRNSALVHGGGAPAPRPSNFSFGTEPAPQIASPVKAVSAISSEKPQAPAAKLNTADLHRKAVSLLEEYFSVRLLDEALQCVEELKSPAYYPELVKEAISLALDKSPPCVEPVANLFEYLFMKKILSARDIGTGCMLFSSLLDDIGIDLPKAPNNFGEIIGKLILAGGLDFKVVREILKKVDDDRFQKAIFSSALQVISSASGQAVLDSQASDIEACQSLFK* 797
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g2680 796 Gene3D - 625 791 - -
Apr9g2680 796 MobiDBLite consensus disorder prediction 128 149 - -
Apr9g2680 796 MobiDBLite consensus disorder prediction 1 37 - -
Apr9g2680 796 MobiDBLite consensus disorder prediction 538 557 - -
Apr9g2680 796 Pfam MA3 domain 633 744 IPR003891 -
Apr9g2680 796 Pfam MIF4G domain 219 444 IPR003890 GO:0003723|GO:0005515
Apr9g2680 796 SUPERFAMILY ARM repeat 627 783 IPR016024 -
Apr9g2680 796 SUPERFAMILY ARM repeat 212 446 IPR016024 -
Apr9g2680 796 PANTHER MIF4G DOMAIN-CONTAINING PROTEIN / MA3 DOMAIN-CONTAINING PROTEIN ISOFORM 2 3 795 - -
Apr9g2680 796 ProSiteProfiles MI domain profile. 631 753 IPR003891 -
Apr9g2680 796 MobiDBLite consensus disorder prediction 536 557 - -
Apr9g2680 796 Gene3D - 209 445 - -
Apr9g2680 796 SMART ma3_7 632 744 IPR003891 -
Apr9g2680 796 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 3 795 IPR045208 GO:0003743
Apr9g2680 796 SMART if4_15 218 444 IPR003890 GO:0003723|GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g2680 Apr-Chr9 33887945 33894283 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g2680 1 794 Eukaryotic Initiation Factors Gene Family AT5G57870 65.125 0.0 985
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g2680 K03260 - gmx:100781275 1345.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g2680 9 33887945 33894283 Apr9g2680 9 33887945 33894283 ECH