Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g2672 ATGTGTTTGTTTAGACTAACAATGTTTCTATTTCTATTCGTGGACACTGTTCATGCAAGAGTTCATGGGAAAGAAAGTGCTGGCCTTGTGAATGGAAAAAGTTCACTTATTTCATTCATGTCAGGCATTGTTTCAGACCCGAAAAATGCTCTAGAGAGTTGGAAAAAATCAGGTGTTCATGTTTGTGATTGGTCAGGTGTGAGATGCAACAATGCAAGTGACATGATCATAGAGCTTGATCTCAGTGGAAGGTCACTGGGGGGCACCATTTCCCCTGCACTGGCTAACATCTCTTCCTTGCAAATTCTTGATCTTTCTGAGAACTTTTTGGTGGGTCACATTCCAAAAGAACTAGGCAATTTAGTTAAGCTTGGACAACTCAGTTTCTCTGGGAATTTTCTTGAAGGGAACATTCCCTCCGAGTTTGGTTCACTTCACAACCTGTACTACCTTGACATGGGAGGCAATCAACTTGAGGAAGAGATTCCTCCTCCACTTTTCTGTAATGGAACTTCATTGAGTTATATAGACCTCTCTAATAATTCCTTAGGAGGACAAATCCCATTGAACAATGAATGTATCCTTAAAGAGCTTAGGTTCCTCTTACTTTGGTCTAATCATCTTGTAGGCCAAGTTCCTTTAGCTCTTTCAAACTCTACCAAGCTTAAATGGCTTGATTTGGAGTCAAATATGTTGAGTGGAGAGCTTCCATCTGAGATTGTACTTAATTGGCCACTGCTACAATTCCTCTACTTGTCATATAACAATTTTGCTAGCCATCTTGGCAACACCAACCTTGAACCTTTCTTTGCTTCCTTGATGAATTTATCTAACTTTCAAGAACTTGAATTGGCGGGAAACAACCTTGGTGGGAAGTTGCCTCATATTATTGGTGATCTTCCTACCAGCCTGCAACAACTTCACCTAGAACAAAATCTCATATATGGTTCTATACCTCCACACATTGCAAACCTTGTAAACCTTACTTTCTTAAAGTTGTCCAGTAACCTAATAAATGGATCAATCCCTGCTACCCTTTGCCAGATGAATAGGCTAGAGAGAATTTATTTGTCAAATAATTCACTATCTGGTGAGATTCCTTCAACCCTTGGTGACATCCAACATCTTGGTCTTCTAGATTTGTCAAGAAACAATCTTTCTGGTTCAATACCAGATAGTTTTGCAAATCTCCCTCAGTTAAGAAGGCTTTTACTTTATGACAACCAGCTTTCTGGAACAATCCCGCCAAGTCTTGGAAAATGTGTCAACTTGGAGATTTTAGACTTGTCTCACAACAAGATTACAGGGTTTATTCCTGCAGAGGTTGCGGCCTTGAGTAGCTTGAAACTATACTTGAATTTGTCAAACAATAACTTGCTCGGGCCTTTACCGTTAGAACTCAGCAAAATGGACATGGTTCTAGCCATTGATGTATCCATGAATAATCTTTCTGGCAGCATCCCACCACAACTGGAAAGTTGTATAGCACTGGAGTACCTCAACCTTTCTGGTAATGCTTTTGAAGGCCCTCTCCCTTATTCATTAGGCCAATTGCTCTATATTCGAGCACTTGATGTGTCTTCAAATCAAATGACAGGGGTAATACCAGAGTCACTGCAGTTGTCTTCCTCTCTCAAGAAACTTAATTTCTCTTTCAACAAATTCTCAGGGAATGTCTCAAATGTGGGAGCATTTTCAAATCTTACCATAGACTCTTTCCTGGGAAATGATGGTCTTTGTGGCCCGTTTAAAGGCATGCAACACTGTCATAAGAAACATAGTTATCATTTGGTGTTCTTGTTAATTCCTATGTTACTATTTGGTACCCCTCTCCTATGCATGTTTTTTAGGTACTCCATGGTAACCAAGTCAAAAGTGAGAAAGCGATTTGCAATTGTTAGTAGAGGTGGCTTGGAGGATGAAGAGGAAACAAAAGAGCTCACGTACCCAAGAATTTCTTATAGACAACTTAGAGAAGCCACTGGAGACTTCAATGCTTCAAGCCTAATTGGTTCAGGTCGGTTTGGACAGGTCTACAAAGGAATGCTCCGAGATAATACAACAGTAGCTGTGAAGGTATTGGGTACAACATCTGGTGAGATTTCATGGAGTTTTAGAAGGGAATGCCAAATCCTGAAAAAGATCAGGCACAGAAATTTAATAAGGATCATCACAATTTGCTGTAAGCCAGAATTTAAGGCTCTTGTTTTTCCCTTGATGTCAAATGGTAGCCTTGAGAGGCACCTATATCCAAGCCATGAGTTAAGGCAAAGGTTGGATGTGGTTCAATTAGTAAGAATCTGCAGTGATGTAGCTGAGGGAATCTCCTATCTGCACCATTACTCTCCAGTGAAAGTAGTGCACTGTGATCTTAAGCCAAGCAATATACTCCTTGATGAAGATCTGACAGCTTTGGTTACTGATTTTGGAATTTCAAGGCTTCTAAAAAGTGATGAGAGTACATCCACCAGGAACTCAACATCTTTCAGTTCAACACATGGTTTGTTATGTGGCTCAGTTGGCTATATAGCTCCTGAGTATGGAATGGGAAAACATGCTTCAACTCAGGGTGATGTTTATAGTTTTGGAGTACTTCTGTTAGAGATTGTGACAGGTAAACGCCCCACAGATGTTCTCATCCATGAAGGTTTGCATGAGTGGGTTAAGAGACAATATGCACAGCCACAAAAGCTTGAAAACGTTGTTGAACAAGCACTACGAAGGTGCTCTCCTAGTGGCATGCCAAGTCATCATAACCAAATGTGGAAAGATGTTGTGCTGGAACTCATTGAGCTGGGGCTACTATGCACACAGCAGAATCCTTCTACAAGACCAAGCATGTTGGATGTGGCTCAAGAAATGGGAAGGTTGAAGGACTATCTCACTAGTTCAACCTTGCCCCCCATAGAAGTCAATCCCAAGATTAATTCTTTGTACAATGAAGATAATTGA 2952 0.4058 MCLFRLTMFLFLFVDTVHARVHGKESAGLVNGKSSLISFMSGIVSDPKNALESWKKSGVHVCDWSGVRCNNASDMIIELDLSGRSLGGTISPALANISSLQILDLSENFLVGHIPKELGNLVKLGQLSFSGNFLEGNIPSEFGSLHNLYYLDMGGNQLEEEIPPPLFCNGTSLSYIDLSNNSLGGQIPLNNECILKELRFLLLWSNHLVGQVPLALSNSTKLKWLDLESNMLSGELPSEIVLNWPLLQFLYLSYNNFASHLGNTNLEPFFASLMNLSNFQELELAGNNLGGKLPHIIGDLPTSLQQLHLEQNLIYGSIPPHIANLVNLTFLKLSSNLINGSIPATLCQMNRLERIYLSNNSLSGEIPSTLGDIQHLGLLDLSRNNLSGSIPDSFANLPQLRRLLLYDNQLSGTIPPSLGKCVNLEILDLSHNKITGFIPAEVAALSSLKLYLNLSNNNLLGPLPLELSKMDMVLAIDVSMNNLSGSIPPQLESCIALEYLNLSGNAFEGPLPYSLGQLLYIRALDVSSNQMTGVIPESLQLSSSLKKLNFSFNKFSGNVSNVGAFSNLTIDSFLGNDGLCGPFKGMQHCHKKHSYHLVFLLIPMLLFGTPLLCMFFRYSMVTKSKVRKRFAIVSRGGLEDEEETKELTYPRISYRQLREATGDFNASSLIGSGRFGQVYKGMLRDNTTVAVKVLGTTSGEISWSFRRECQILKKIRHRNLIRIITICCKPEFKALVFPLMSNGSLERHLYPSHELRQRLDVVQLVRICSDVAEGISYLHHYSPVKVVHCDLKPSNILLDEDLTALVTDFGISRLLKSDESTSTRNSTSFSSTHGLLCGSVGYIAPEYGMGKHASTQGDVYSFGVLLLEIVTGKRPTDVLIHEGLHEWVKRQYAQPQKLENVVEQALRRCSPSGMPSHHNQMWKDVVLELIELGLLCTQQNPSTRPSMLDVAQEMGRLKDYLTSSTLPPIEVNPKINSLYNEDN* 984
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g2672 983 ProSiteProfiles Leucine-rich repeat profile. 423 444 IPR001611 GO:0005515
Apr9g2672 983 Gene3D Ribonuclease Inhibitor 31 193 IPR032675 -
Apr9g2672 983 SMART serkin_6 664 961 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr9g2672 983 Pfam Protein kinase domain 666 952 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr9g2672 983 Gene3D Phosphorylase Kinase; domain 1 636 738 - -
Apr9g2672 983 PANTHER LEUCINE-RICH RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN 23 958 - -
Apr9g2672 983 CDD STKc_IRAK 670 957 - -
Apr9g2672 983 SUPERFAMILY L domain-like 272 573 - -
Apr9g2672 983 ProSitePatterns Serine/Threonine protein kinases active-site signature. 786 798 IPR008271 GO:0004672|GO:0006468
Apr9g2672 983 Pfam Leucine rich repeat 351 410 IPR001611 GO:0005515
Apr9g2672 983 ProSitePatterns Protein kinases ATP-binding region signature. 670 692 IPR017441 GO:0005524
Apr9g2672 983 SUPERFAMILY Protein kinase-like (PK-like) 647 952 IPR011009 -
Apr9g2672 983 ProSiteProfiles Protein kinase domain profile. 664 961 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr9g2672 983 Pfam Leucine Rich Repeat 423 441 IPR001611 GO:0005515
Apr9g2672 983 PANTHER OS04G0122200 PROTEIN 23 958 - -
Apr9g2672 983 Gene3D Ribonuclease Inhibitor 194 592 IPR032675 -
Apr9g2672 983 SUPERFAMILY RNI-like 78 363 - -
Apr9g2672 983 SMART LRR_typ_2 422 445 IPR003591 -
Apr9g2672 983 SMART LRR_typ_2 97 121 IPR003591 -
Apr9g2672 983 SMART LRR_typ_2 397 421 IPR003591 -
Apr9g2672 983 SMART LRR_typ_2 325 349 IPR003591 -
Apr9g2672 983 SMART LRR_typ_2 145 169 IPR003591 -
Apr9g2672 983 SMART LRR_typ_2 373 396 IPR003591 -
Apr9g2672 983 Gene3D Transferase(Phosphotransferase) domain 1 740 966 - -
Apr9g2672 983 Pfam Leucine rich repeat N-terminal domain 34 70 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g2672 Apr-Chr9 33829107 33832343 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g2672 33 959 Receptor kinase-like Gene Family AT3G47110 35.265 4.29e-158 491
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Apr9g2672 Pkinase 4.7e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g2672 - - gmx:100792446 1559.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g2672 9 33829107 33832343 Apr9g2672 9 33829107 33832343 ECH