Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g2662 ATGACCATGCCTCTCCACTGCCTTCTCCTCCTCCTACTAATCAATACCCTCTGTTCCGCTTCCGAGCCTCGCAACCCCGAAGTGGAGGCTTTGATGAACATTAAAGGAGCTCTTAATGACCCGCACGGTGTGTTGAGCAACTGGGATGAATTCTCCGTCGACGCTTGCAGCTGGGCCATGATCACTTGCTCTTCTGATTACCTTGTCATAGGCCTAGGAGCGCCTAGCCAATCGCTCTCTGGAACTCTCTCTCCTGCAATTGGAAATCTGACAAATCTTAGACAAGTGTTACTACAGAATAACAATATCTCAGGCAAAATACCGCCGGAGCTTGGAACTCTTCCCAATCTTCAGACTTTGGATCTTTCTAATAACCGATTCTCTGGGGTCATTCCACCCTCCCTGAGTCAGTTGAATAGTCTTCAGTACCTGAGGCTGAACAACAATAGTTTGTCTGGACCCTTTCCCGTGTCACTGGCGAAAACCCCACAGCTTGCTTTCTTGGACTTGTCTTATAACAATCTCAGTGGACCATTGCCCAAGTTCCCAGCCAGGTCATTCAATATTGTGGGGAACCCTTTAGTTTGTGGAAGCAGCTCTACTGAAGGTTGCTCTGGATCGACAACACTTATGCCCGTAGCATTATCTCAAGCATCATCGGAAGGAAATCACAAGTCCAAGAAACTAGCAATTGCACTTGGGGTCACTCTTAGTTGTGCTTCTCTCATTCTCCTTACTTTTGGATTATTTTGGTATAGAAAGAAACGACAGCATGGAGCGATTCTGTATATTGGTGATTATAAGGAAGAAGGGGTTGTTAGCTTGGGAAATCTGAAAAGTTTTACTTTCAGAGACCTCCAACATGCAACGGATAATTTCAGCTCCAAGAATATTCTTGGTGCTGGAGGCTTTGGCAATGTTTATAGGGGAAAGCTTGGAGATGGCACAATGGTGGCAGTGAAAAGGCTGAAAGATGTGAATGGTAGTGCTGGCGAATCACAGTTCCAAACAGAGCTAGAAATGATCAGCTTGGCTGTTCACCGCAATCTACTTCGCCTAATTGGATATTGTGCTACTCCTAACGAAAAACTTTTGGTTTATCCTTACATGTCTAATGGCAGTGTGGCCTCCAGGCTTAGAGGTAAACCAGCTCTAGATTGGAACACTAGAAAGAGAATAGCAATTGGAGCTGCCAGAGGTCTTCTGTATTTGCATGAGCAATGTGATCCGAAAATAATACACAGAGATGTAAAGGCCGCTAATGTGCTTCTGGATGACTATTGTGAGGCTGTTGTTGGTGATTTTGGCCTTGCAAAACTCCTTGATCATGCTGATTCCCATGTCACCACTGCTGTCCGTGGCACTGTTGGGCACATTGCACCCGAGTACCTCTCCACTGGTCAGTCATCTGAGAAAACAGATGTATTTGGATTTGGCATTCTCTTGTTAGAGCTCATAACTGGAATGACAGCACTCGAGTTTGGGAAAACGGTGAATCAAAAAGGTGCTATGCTAGAGTGGGTTAGGAAAATACAGCAAGAAAAGAAGGTTGCAGAGTTGGTGGACAAGGAGCTAGGAAATAATTATGATAGAATAGAGGTGGGGGAGATGCTGCAAGTAGCTTTACTCTGTACTCAATATTTGACAGCCCATCGCCCTAAAATGTCTGAAGTGGTCCGAATGCTTGAAGGTGACGGGCTTGCTGAGAAGTGGGCATCATCACATAATTTCGGTAATCACGGCATGAACCCCAGCCACAGTAACAATAGCAATTGTTCATCTCGCCCTACCTCTGCATCAGAACATGATAATGTTCATGATCGTTCCAGCATGTTTGGCACGACAATGGATGATGATGATGAACAGTCTTTGGAATCCTATGCCATGGAACTCTCTGGTCCTAGATAA 1908 0.4523 MTMPLHCLLLLLLINTLCSASEPRNPEVEALMNIKGALNDPHGVLSNWDEFSVDACSWAMITCSSDYLVIGLGAPSQSLSGTLSPAIGNLTNLRQVLLQNNNISGKIPPELGTLPNLQTLDLSNNRFSGVIPPSLSQLNSLQYLRLNNNSLSGPFPVSLAKTPQLAFLDLSYNNLSGPLPKFPARSFNIVGNPLVCGSSSTEGCSGSTTLMPVALSQASSEGNHKSKKLAIALGVTLSCASLILLTFGLFWYRKKRQHGAILYIGDYKEEGVVSLGNLKSFTFRDLQHATDNFSSKNILGAGGFGNVYRGKLGDGTMVAVKRLKDVNGSAGESQFQTELEMISLAVHRNLLRLIGYCATPNEKLLVYPYMSNGSVASRLRGKPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDYCEAVVGDFGLAKLLDHADSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMTALEFGKTVNQKGAMLEWVRKIQQEKKVAELVDKELGNNYDRIEVGEMLQVALLCTQYLTAHRPKMSEVVRMLEGDGLAEKWASSHNFGNHGMNPSHSNNSNCSSRPTSASEHDNVHDRSSMFGTTMDDDDEQSLESYAMELSGPR* 636
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g2662 635 Gene3D Ribonuclease Inhibitor 24 206 IPR032675 -
Apr9g2662 635 Gene3D Transferase(Phosphotransferase) domain 1 370 579 - -
Apr9g2662 635 Gene3D Phosphorylase Kinase; domain 1 264 369 - -
Apr9g2662 635 MobiDBLite consensus disorder prediction 578 599 - -
Apr9g2662 635 SUPERFAMILY L domain-like 25 190 - -
Apr9g2662 635 ProSiteProfiles Leucine-rich repeat profile. 116 139 IPR001611 GO:0005515
Apr9g2662 635 SUPERFAMILY Protein kinase-like (PK-like) 275 563 IPR011009 -
Apr9g2662 635 Pfam Leucine rich repeat 115 175 IPR001611 GO:0005515
Apr9g2662 635 SMART serkin_6 293 548 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr9g2662 635 MobiDBLite consensus disorder prediction 578 635 - -
Apr9g2662 635 Pfam Protein tyrosine and serine/threonine kinase 296 562 IPR001245 GO:0004672|GO:0006468
Apr9g2662 635 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 7 635 - -
Apr9g2662 635 Pfam Leucine rich repeat N-terminal domain 25 64 IPR013210 -
Apr9g2662 635 ProSiteProfiles Protein kinase domain profile. 293 548 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr9g2662 635 MobiDBLite consensus disorder prediction 600 615 - -
Apr9g2662 635 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 7 635 - -
Apr9g2662 635 ProSitePatterns Serine/Threonine protein kinases active-site signature. 412 424 IPR008271 GO:0004672|GO:0006468
Apr9g2662 635 ProSitePatterns Protein kinases ATP-binding region signature. 299 321 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g2662 Apr-Chr9 33747440 33752268 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g2662 1 635 Receptor kinase-like Gene Family AT5G16000 63.833 0.0 800
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Apr9g2662 PK_Tyr_Ser-Thr 3.6e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g2662 - - gmx:100797186 1125.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g2662 9 33747440 33752268 Apr9g2662 9 33747440 33752268 ECH