LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Apr9g2649	ATGGGTAGTTTAGCTGGTCATTTTCCTCTAATGGTTATGATAGGCTTACAAGTTCATTATGCAGCGCTTGCCATCTTCACAAGAGCTGCTCTGTTAGATGGGTTGAGTACCACGGTCTTTGTAGTTTACAGGCAAGGCATAGCCACTTTGGCTTTGGCACCTATGTTCTTTTCTTCTCAAAGGAGACAATCATTCAAGACTTCATTGGGATTCAGGAGCTTCTCTTTGATGTTTGTGACCGCTCTTGTTGGAGTTACAGCAAATCAGAATGCATATTTTAGAGGTTTATATTATGCATCTTCTACTGCAGCTACTGCTATGAGTAATCTGATACCTGCATTAACTTTTGTAATTGCAACGATTGTTGGATTTGAGAAAGTTGATCTACGAAGCTTGAGAAGCATTGCCAAAGTAATAGGGACAGTTTGTTGCGTGAGTGGAGCCTTAACCATGGCATTGGTCAAAGGACAGAAGCTGCTACACGTGGAGTTTCTTCCTTCTAAGCATCTCACTGCCAATGGAGGTGAGGATTGGCTGCTGGGTTGTCTATTGCTCTTAGCAAGTAGTGTTTTTTGGTCATGTTGGATGATACTGCAGGTACCAATTGCTTCAAGTTGCCCAGATCATTTATTATCAACCTTTTGGATGTGTCTCTTTGCAACTATACAATCAGCCATATTTGCACTGCTCTCTGAGAAGGATCTTCAATCATGGATCTTGAGTTCTCCTTTACAAATTTCATGTAGTTTATATGCAGGAATTGGAATTGCGGTTAGCTTCTTTGTTCAATCTTGGTGCATCTCAGAAAGAGGTCCTCTATACTGTGCCATGTTCAACCCTCTAGCAACAGTCATCACAGCTTTTATAACCGCAACATTCCTAAAAGAAGAGTTATATATCGGAAGTTTGGTAGGGGCTATTGGAGTGATCGCTGGTTTATATATTGTGCTTTGGGGTAAAGCGAAAGAGTTTGATGAGATTAAACATGAGGCACCAAAACCAAGCTTCCAGGAAGATGAGATAAGTAATAGGGTAGATTTGGAAGCACCACTTTTGTCAGAGAAGTCTGAACATGTAGCAGATAGCAAGCTGGTACCATGA	1101	0.4114	MGSLAGHFPLMVMIGLQVHYAALAIFTRAALLDGLSTTVFVVYRQGIATLALAPMFFSSQRRQSFKTSLGFRSFSLMFVTALVGVTANQNAYFRGLYYASSTAATAMSNLIPALTFVIATIVGFEKVDLRSLRSIAKVIGTVCCVSGALTMALVKGQKLLHVEFLPSKHLTANGGEDWLLGCLLLLASSVFWSCWMILQVPIASSCPDHLLSTFWMCLFATIQSAIFALLSEKDLQSWILSSPLQISCSLYAGIGIAVSFFVQSWCISERGPLYCAMFNPLATVITAFITATFLKEELYIGSLVGAIGVIAGLYIVLWGKAKEFDEIKHEAPKPSFQEDEISNRVDLEAPLLSEKSEHVADSKLVP*	367

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Annotation information

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Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Apr9g2649	366	SUPERFAMILY	Multidrug resistance efflux transporter EmrE	215	322	-	-
Apr9g2649	366	Pfam	EamA-like transporter family	10	144	IPR000620	GO:0016020\|GO:0016021
Apr9g2649	366	Pfam	EamA-like transporter family	180	317	IPR000620	GO:0016020\|GO:0016021
Apr9g2649	366	SUPERFAMILY	Multidrug resistance efflux transporter EmrE	43	152	-	-
Apr9g2649	366	PANTHER	WAT1-RELATED PROTEIN	9	341	IPR030184	GO:0016021\|GO:0022857
Apr9g2649	366	PANTHER	WAT1-RELATED PROTEIN	9	341	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Apr9g2649	Apr-Chr9	33662401	33664686	Dispersed/Transposed

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Apr9g2649	10	356	Nodulin-like Gene Family	AT4G28040	47.126	7.83e-109	321

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Apr9g2649	-		-	gmx:100817369	585.874

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Event-related genes

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Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Apr9g2649	9	33662401	33664686	Apr9g2649	9	33662401	33664686	ECH

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