Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g2649 ATGGGTAGTTTAGCTGGTCATTTTCCTCTAATGGTTATGATAGGCTTACAAGTTCATTATGCAGCGCTTGCCATCTTCACAAGAGCTGCTCTGTTAGATGGGTTGAGTACCACGGTCTTTGTAGTTTACAGGCAAGGCATAGCCACTTTGGCTTTGGCACCTATGTTCTTTTCTTCTCAAAGGAGACAATCATTCAAGACTTCATTGGGATTCAGGAGCTTCTCTTTGATGTTTGTGACCGCTCTTGTTGGAGTTACAGCAAATCAGAATGCATATTTTAGAGGTTTATATTATGCATCTTCTACTGCAGCTACTGCTATGAGTAATCTGATACCTGCATTAACTTTTGTAATTGCAACGATTGTTGGATTTGAGAAAGTTGATCTACGAAGCTTGAGAAGCATTGCCAAAGTAATAGGGACAGTTTGTTGCGTGAGTGGAGCCTTAACCATGGCATTGGTCAAAGGACAGAAGCTGCTACACGTGGAGTTTCTTCCTTCTAAGCATCTCACTGCCAATGGAGGTGAGGATTGGCTGCTGGGTTGTCTATTGCTCTTAGCAAGTAGTGTTTTTTGGTCATGTTGGATGATACTGCAGGTACCAATTGCTTCAAGTTGCCCAGATCATTTATTATCAACCTTTTGGATGTGTCTCTTTGCAACTATACAATCAGCCATATTTGCACTGCTCTCTGAGAAGGATCTTCAATCATGGATCTTGAGTTCTCCTTTACAAATTTCATGTAGTTTATATGCAGGAATTGGAATTGCGGTTAGCTTCTTTGTTCAATCTTGGTGCATCTCAGAAAGAGGTCCTCTATACTGTGCCATGTTCAACCCTCTAGCAACAGTCATCACAGCTTTTATAACCGCAACATTCCTAAAAGAAGAGTTATATATCGGAAGTTTGGTAGGGGCTATTGGAGTGATCGCTGGTTTATATATTGTGCTTTGGGGTAAAGCGAAAGAGTTTGATGAGATTAAACATGAGGCACCAAAACCAAGCTTCCAGGAAGATGAGATAAGTAATAGGGTAGATTTGGAAGCACCACTTTTGTCAGAGAAGTCTGAACATGTAGCAGATAGCAAGCTGGTACCATGA 1101 0.4114 MGSLAGHFPLMVMIGLQVHYAALAIFTRAALLDGLSTTVFVVYRQGIATLALAPMFFSSQRRQSFKTSLGFRSFSLMFVTALVGVTANQNAYFRGLYYASSTAATAMSNLIPALTFVIATIVGFEKVDLRSLRSIAKVIGTVCCVSGALTMALVKGQKLLHVEFLPSKHLTANGGEDWLLGCLLLLASSVFWSCWMILQVPIASSCPDHLLSTFWMCLFATIQSAIFALLSEKDLQSWILSSPLQISCSLYAGIGIAVSFFVQSWCISERGPLYCAMFNPLATVITAFITATFLKEELYIGSLVGAIGVIAGLYIVLWGKAKEFDEIKHEAPKPSFQEDEISNRVDLEAPLLSEKSEHVADSKLVP* 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g2649 366 SUPERFAMILY Multidrug resistance efflux transporter EmrE 215 322 - -
Apr9g2649 366 Pfam EamA-like transporter family 10 144 IPR000620 GO:0016020|GO:0016021
Apr9g2649 366 Pfam EamA-like transporter family 180 317 IPR000620 GO:0016020|GO:0016021
Apr9g2649 366 SUPERFAMILY Multidrug resistance efflux transporter EmrE 43 152 - -
Apr9g2649 366 PANTHER WAT1-RELATED PROTEIN 9 341 IPR030184 GO:0016021|GO:0022857
Apr9g2649 366 PANTHER WAT1-RELATED PROTEIN 9 341 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g2649 Apr-Chr9 33662401 33664686 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g2649 10 356 Nodulin-like Gene Family AT4G28040 47.126 7.83e-109 321
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g2649 - - gmx:100817369 585.874
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g2649 9 33662401 33664686 Apr9g2649 9 33662401 33664686 ECH